ClinicalMetaScience
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README.md
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SciBERT text classification model for positive and negative results prediction in scientific abstracts of clinical psychology and psychotherapy.
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## Data
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We annotated over 1,900 clinical psychology abstracts into two categories: 'positive results only' and 'mixed
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The SciBERT model was validated against one in-domain (clinical psychology) and two out-of-domain data sets comprising psychotherapy abstracts. We compared model performance with Random Forest and three further benchmarks: natural language indicators of result types, *p*-values, and abstract length.
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SciBERT outperformed all benchmarks and random forest in in-domain (accuracy: 0.86) and out-of-domain data (accuracy: 0.85-0.88).
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Further information on documentation, code and data for the project "Publication Bias Research in Clincial Psychology Using Natural Language Processing" can be found on this [GitHub repository](https://github.com/PsyCapsLock/PubBiasDetect).
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## Using the model on Huggingface
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The model can be used on Hugginface utilizing the "Hosted inference API" in the window on the right.
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Click 'Compute' to predict the class labels for an example abstract or an abstract inserted by yourself.
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The class label 'positive' corresponds to 'positive results only', while 'negative' represents 'mixed
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## Using the model for larger data
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```
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SciBERT text classification model for positive and negative results prediction in scientific abstracts of clinical psychology and psychotherapy.
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## Data
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We annotated over 1,900 clinical psychology abstracts into two categories: 'positive results only' and 'mixed or negative results', and trained models using SciBERT.
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The SciBERT model was validated against one in-domain (clinical psychology) and two out-of-domain data sets comprising psychotherapy abstracts. We compared model performance with Random Forest and three further benchmarks: natural language indicators of result types, *p*-values, and abstract length.
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SciBERT outperformed all benchmarks and random forest in in-domain (accuracy: 0.86) and out-of-domain data (accuracy: 0.85-0.88).
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Further information on documentation, code and data for the project "Publication Bias Research in Clincial Psychology Using Natural Language Processing" can be found on this [GitHub repository](https://github.com/PsyCapsLock/PubBiasDetect).
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## Using the model on Huggingface
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The model can be used on Hugginface utilizing the "Hosted inference API" in the window on the right.
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Click 'Compute' to predict the class labels for an example abstract or an abstract inserted by yourself.
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The class label 'positive' corresponds to 'positive results only', while 'negative' represents 'mixed or negative results'.
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## Using the model for larger data
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```
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