Updated files with BERT-base backend

config.json

@@ -1,5 +1,5 @@
 {
-  "_name_or_path": "bert-base-uncased",
+  "_name_or_path": "dmis-lab/biobert-v1.1",
   "architectures": [
     "BertForMaskedLM"
   ],
@@ -19,8 +19,8 @@
   "pad_token_id": 0,
   "position_embedding_type": "absolute",
   "torch_dtype": "float32",
-  "transformers_version": "4.15.0",
+  "transformers_version": "4.24.0",
   "type_vocab_size": 2,
   "use_cache": true,
-  "vocab_size": 30522
+  "vocab_size": 28996
 }

optimizer.pt

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:351dc6141f27f1f3545b964d9d311ed82b738571405f732cc873d81f9f2730d5
-size 876231833
+oid sha256:89b6f007b46e7165325ed415fe616a29150b674034378bf802acbcfe96d7c6ad
+size 866845317

pytorch_model.bin

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:25ba9ec4f8a5ecefc7815b27eefe6547cb69bd4ffde30dba5175a36b29c2e24f
-size 438141995
+oid sha256:6dbecf2356292a164e93d4ced55407cb97bccd76ab62b2079835361e5efb7c96
+size 433436665

rng_state.pth

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
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-size 14503
+oid sha256:1dee54a6405c581a2d898515cb9ac59dd6ccd12951e29b04d0197d6efe4760ee
+size 14575

scheduler.pt

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:c22042e807ac957983d399a79e54eee57356a1845c899e1b2be4f41784b9f154
-size 623
+oid sha256:7ce0d0f0f57fcbf2e7eb34ce1cf7fb652f2a765e585241beb37be82cd9eff654
+size 627

special_tokens_map.json

@@ -0,0 +1,7 @@
+{
+  "cls_token": "[CLS]",
+  "mask_token": "[MASK]",
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "unk_token": "[UNK]"
+}

tokenizer_config.json

@@ -0,0 +1,57 @@
+{
+  "added_tokens_decoder": {
+    "0": {
+      "content": "[PAD]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "100": {
+      "content": "[UNK]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "101": {
+      "content": "[CLS]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "102": {
+      "content": "[SEP]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "103": {
+      "content": "[MASK]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    }
+  },
+  "clean_up_tokenization_spaces": true,
+  "cls_token": "[CLS]",
+  "do_basic_tokenize": true,
+  "do_lower_case": false,
+  "mask_token": "[MASK]",
+  "model_max_length": 512,
+  "never_split": null,
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "strip_accents": null,
+  "tokenize_chinese_chars": true,
+  "tokenizer_class": "BertTokenizer",
+  "unk_token": "[UNK]"
+}

training_args.bin

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:06eaf66465f5a7b85a1675a74f376781e1a37d92bb1a0cbfdacd8c9caf22d95c
-size 2991
+oid sha256:487d4aa5bcb167e3a835a8a92268ec0c5908d74e0197248f14e53429e50712c8
+size 3387