hf_eng_fra_trans / harvard_translation.py
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# !pip install http://download.pytorch.org/whl/cu80/torch-0.3.0.post4-cp36-cp36m-linux_x86_64.whl numpy matplotlib spacy torchtext seaborn
import numpy as np
import torch
import torch.nn as nn
import torch.nn.functional as F
import math, copy, time
from torch.autograd import Variable
import matplotlib.pyplot as plt
import seaborn
seaborn.set_context(context="talk")
#%matplotlib inlines
class EncoderDecoder(nn.Module):
"""
A standard Encoder-Decoder architecture. Base for this and many
other models.
"""
def __init__(self, encoder, decoder, src_embed, tgt_embed, generator):
super(EncoderDecoder, self).__init__()
self.encoder = encoder
self.decoder = decoder
self.src_embed = src_embed
self.tgt_embed = tgt_embed
self.generator = generator
def forward(self, src, tgt, src_mask, tgt_mask):
"Take in and process masked src and target sequences."
return self.decode(self.encode(src, src_mask), src_mask,
tgt, tgt_mask)
def encode(self, src, src_mask):
return self.encoder(self.src_embed(src), src_mask)
def decode(self, memory, src_mask, tgt, tgt_mask):
return self.decoder(self.tgt_embed(tgt), memory, src_mask, tgt_mask)
class Generator(nn.Module):
"Define standard linear + softmax generation step."
def __init__(self, d_model, vocab):
super(Generator, self).__init__()
self.proj = nn.Linear(d_model, vocab)
def forward(self, x):
return F.log_softmax(self.proj(x), dim=-1)
def clones(module, N):
"Produce N identical layers."
return nn.ModuleList([copy.deepcopy(module) for _ in range(N)])
class Encoder(nn.Module):
"Core encoder is a stack of N layers"
def __init__(self, layer, N):
super(Encoder, self).__init__()
self.layers = clones(layer, N)
self.norm = LayerNorm(layer.size)
def forward(self, x, mask):
"Pass the input (and mask) through each layer in turn."
for layer in self.layers:
x = layer(x, mask)
return self.norm(x)
class LayerNorm(nn.Module):
"Construct a layernorm module (See citation for details)."
def __init__(self, features, eps=1e-6):
super(LayerNorm, self).__init__()
self.a_2 = nn.Parameter(torch.ones(features))
self.b_2 = nn.Parameter(torch.zeros(features))
self.eps = eps
def forward(self, x):
mean = x.mean(-1, keepdim=True)
std = x.std(-1, keepdim=True)
return self.a_2 * (x - mean) / (std + self.eps) + self.b_2
class SublayerConnection(nn.Module):
"""
A residual connection followed by a layer norm.
Note for code simplicity the norm is first as opposed to last.
"""
def __init__(self, size, dropout):
super(SublayerConnection, self).__init__()
self.norm = LayerNorm(size)
self.dropout = nn.Dropout(dropout)
def forward(self, x, sublayer):
"Apply residual connection to any sublayer with the same size."
return x + self.dropout(sublayer(self.norm(x)))
class EncoderLayer(nn.Module):
"Encoder is made up of self-attn and feed forward (defined below)"
def __init__(self, size, self_attn, feed_forward, dropout):
super(EncoderLayer, self).__init__()
self.self_attn = self_attn
self.feed_forward = feed_forward
self.sublayer = clones(SublayerConnection(size, dropout), 2)
self.size = size
def forward(self, x, mask):
"Follow Figure 1 (left) for connections."
x = self.sublayer[0](x, lambda x: self.self_attn(x, x, x, mask))
return self.sublayer[1](x, self.feed_forward)
class Decoder(nn.Module):
"Generic N layer decoder with masking."
def __init__(self, layer, N):
super(Decoder, self).__init__()
self.layers = clones(layer, N)
self.norm = LayerNorm(layer.size)
def forward(self, x, memory, src_mask, tgt_mask):
for layer in self.layers:
x = layer(x, memory, src_mask, tgt_mask)
return self.norm(x)
class DecoderLayer(nn.Module):
"Decoder is made of self-attn, src-attn, and feed forward (defined below)"
def __init__(self, size, self_attn, src_attn, feed_forward, dropout):
super(DecoderLayer, self).__init__()
self.size = size
self.self_attn = self_attn
self.src_attn = src_attn
self.feed_forward = feed_forward
self.sublayer = clones(SublayerConnection(size, dropout), 3)
def forward(self, x, memory, src_mask, tgt_mask):
"Follow Figure 1 (right) for connections."
m = memory
x = self.sublayer[0](x, lambda x: self.self_attn(x, x, x, tgt_mask))
x = self.sublayer[1](x, lambda x: self.src_attn(x, m, m, src_mask))
return self.sublayer[2](x, self.feed_forward)
def subsequent_mask(size):
"Mask out subsequent positions."
attn_shape = (1, size, size)
subsequent_mask = np.triu(np.ones(attn_shape), k=1).astype('uint8')
return torch.from_numpy(subsequent_mask) == 0
def attention(query, key, value, mask=None, dropout=None):
"Compute 'Scaled Dot Product Attention'"
d_k = query.size(-1)
scores = torch.matmul(query, key.transpose(-2, -1)) \
/ math.sqrt(d_k)
if mask is not None:
scores = scores.masked_fill(mask == 0, -1e9)
p_attn = F.softmax(scores, dim = -1)
if dropout is not None:
p_attn = dropout(p_attn)
return torch.matmul(p_attn, value), p_attn
class MultiHeadedAttention(nn.Module):
def __init__(self, h, d_model, dropout=0.1):
"Take in model size and number of heads."
super(MultiHeadedAttention, self).__init__()
assert d_model % h == 0
# We assume d_v always equals d_k
self.d_k = d_model // h
self.h = h
self.linears = clones(nn.Linear(d_model, d_model), 4)
self.attn = None
self.dropout = nn.Dropout(p=dropout)
def forward(self, query, key, value, mask=None):
"Implements Figure 2"
if mask is not None:
# Same mask applied to all h heads.
mask = mask.unsqueeze(1)
nbatches = query.size(0)
# 1) Do all the linear projections in batch from d_model => h x d_k
query, key, value = \
[l(x).view(nbatches, -1, self.h, self.d_k).transpose(1, 2)
for l, x in zip(self.linears, (query, key, value))]
# 2) Apply attention on all the projected vectors in batch.
x, self.attn = attention(query, key, value, mask=mask,
dropout=self.dropout)
# 3) "Concat" using a view and apply a final linear.
x = x.transpose(1, 2).contiguous() \
.view(nbatches, -1, self.h * self.d_k)
return self.linears[-1](x)
class PositionwiseFeedForward(nn.Module):
"Implements FFN equation."
def __init__(self, d_model, d_ff, dropout=0.1):
super(PositionwiseFeedForward, self).__init__()
self.w_1 = nn.Linear(d_model, d_ff)
self.w_2 = nn.Linear(d_ff, d_model)
self.dropout = nn.Dropout(dropout)
def forward(self, x):
return self.w_2(self.dropout(F.relu(self.w_1(x))))
class Embeddings(nn.Module):
def __init__(self, d_model, vocab):
super(Embeddings, self).__init__()
self.lut = nn.Embedding(vocab, d_model)
self.d_model = d_model
def forward(self, x):
return self.lut(x) * math.sqrt(self.d_model)
class PositionalEncoding(nn.Module):
"Implement the PE function."
def __init__(self, d_model, dropout, max_len=5000):
super(PositionalEncoding, self).__init__()
self.dropout = nn.Dropout(p=dropout)
# Compute the positional encodings once in log space.
pe = torch.zeros(max_len, d_model)
position = torch.arange(0, max_len).unsqueeze(1)
div_term = torch.exp(torch.arange(0, d_model, 2) *
-(math.log(10000.0) / d_model))
pe[:, 0::2] = torch.sin(position * div_term)
pe[:, 1::2] = torch.cos(position * div_term)
pe = pe.unsqueeze(0)
self.register_buffer('pe', pe)
def forward(self, x):
x = x + Variable(self.pe[:, :x.size(1)],
requires_grad=False)
return self.dropout(x)
def make_model(src_vocab, tgt_vocab, N=6,
d_model=512, d_ff=2048, h=8, dropout=0.1):
"Helper: Construct a model from hyperparameters."
c = copy.deepcopy
attn = MultiHeadedAttention(h, d_model)
ff = PositionwiseFeedForward(d_model, d_ff, dropout)
position = PositionalEncoding(d_model, dropout)
model = EncoderDecoder(
Encoder(EncoderLayer(d_model, c(attn), c(ff), dropout), N),
Decoder(DecoderLayer(d_model, c(attn), c(attn),
c(ff), dropout), N),
nn.Sequential(Embeddings(d_model, src_vocab), c(position)),
nn.Sequential(Embeddings(d_model, tgt_vocab), c(position)),
Generator(d_model, tgt_vocab))
# This was important from their code.
# Initialize parameters with Glorot / fan_avg.
for p in model.parameters():
if p.dim() > 1:
nn.init.xavier_uniform(p)
return model
class Batch:
"Object for holding a batch of data with mask during training."
def __init__(self, src, trg=None, pad=0):
self.src = src
self.src_mask = (src != pad).unsqueeze(-2)
if trg is not None:
self.trg = trg[:, :-1]
self.trg_y = trg[:, 1:]
self.trg_mask = \
self.make_std_mask(self.trg, pad)
self.ntokens = (self.trg_y != pad).data.sum()
@staticmethod
def make_std_mask(tgt, pad):
"Create a mask to hide padding and future words."
tgt_mask = (tgt != pad).unsqueeze(-2)
tgt_mask = tgt_mask & Variable(
subsequent_mask(tgt.size(-1)).type_as(tgt_mask.data))
return tgt_mask
def run_epoch(data_iter, model, loss_compute):
"Standard Training and Logging Function"
start = time.time()
total_tokens = 0
total_loss = 0
tokens = 0
for i, batch in enumerate(data_iter):
out = model.forward(batch.src, batch.trg,
batch.src_mask, batch.trg_mask)
loss = loss_compute(out, batch.trg_y, batch.ntokens)
total_loss += loss
total_tokens += batch.ntokens
tokens += batch.ntokens
if i % 50 == 1:
elapsed = time.time() - start
print("Epoch Step: %d Loss: %f Tokens per Sec: %f" %
(i, loss / batch.ntokens, tokens / elapsed))
start = time.time()
tokens = 0
return total_loss / total_tokens
global max_src_in_batch, max_tgt_in_batch
def batch_size_fn(new, count, sofar):
"Keep augmenting batch and calculate total number of tokens + padding."
global max_src_in_batch, max_tgt_in_batch
if count == 1:
max_src_in_batch = 0
max_tgt_in_batch = 0
max_src_in_batch = max(max_src_in_batch, len(new.src))
max_tgt_in_batch = max(max_tgt_in_batch, len(new.trg) + 2)
src_elements = count * max_src_in_batch
tgt_elements = count * max_tgt_in_batch
return max(src_elements, tgt_elements)
class NoamOpt:
"Optim wrapper that implements rate."
def __init__(self, model_size, factor, warmup, optimizer):
self.optimizer = optimizer
self._step = 0
self.warmup = warmup
self.factor = factor
self.model_size = model_size
self._rate = 0
def step(self):
"Update parameters and rate"
self._step += 1
rate = self.rate()
for p in self.optimizer.param_groups:
p['lr'] = rate
self._rate = rate
self.optimizer.step()
def rate(self, step = None):
"Implement `lrate` above"
if step is None:
step = self._step
return self.factor * \
(self.model_size ** (-0.5) *
min(step ** (-0.5), step * self.warmup ** (-1.5)))
def get_std_opt(model):
return NoamOpt(model.src_embed[0].d_model, 2, 4000,
torch.optim.Adam(model.parameters(), lr=0, betas=(0.9, 0.98), eps=1e-9))
class LabelSmoothing(nn.Module):
"Implement label smoothing."
def __init__(self, size, padding_idx, smoothing=0.0):
super(LabelSmoothing, self).__init__()
self.criterion = nn.KLDivLoss(size_average=False)
self.padding_idx = padding_idx
self.confidence = 1.0 - smoothing
self.smoothing = smoothing
self.size = size
self.true_dist = None
def forward(self, x, target):
assert x.size(1) == self.size
true_dist = x.data.clone()
true_dist.fill_(self.smoothing / (self.size - 2))
true_dist.scatter_(1, target.data.unsqueeze(1), self.confidence)
true_dist[:, self.padding_idx] = 0
mask = torch.nonzero(target.data == self.padding_idx)
if mask.dim() > 0:
true_dist.index_fill_(0, mask.squeeze(), 0.0)
self.true_dist = true_dist
return self.criterion(x, Variable(true_dist, requires_grad=False))
def data_gen(V, batch, nbatches):
"Generate random data for a src-tgt copy task."
for i in range(nbatches):
data = torch.from_numpy(np.random.randint(1, V, size=(batch, 10)))
data[:, 0] = 1
src = Variable(data, requires_grad=False)
tgt = Variable(data, requires_grad=False)
yield Batch(src, tgt, 0)
class SimpleLossCompute:
"A simple loss compute and train function."
def __init__(self, generator, criterion, opt=None):
self.generator = generator
self.criterion = criterion
self.opt = opt
def __call__(self, x, y, norm):
x = self.generator(x)
loss = self.criterion(x.contiguous().view(-1, x.size(-1)),
y.contiguous().view(-1)) / norm
loss.backward()
if self.opt is not None:
self.opt.step()
self.opt.optimizer.zero_grad()
return loss.data[0] * norm
V = 11
criterion = LabelSmoothing(size=V, padding_idx=0, smoothing=0.0)
model = make_model(V, V, N=2)
model_opt = NoamOpt(model.src_embed[0].d_model, 1, 400,
torch.optim.Adam(model.parameters(), lr=0, betas=(0.9, 0.98), eps=1e-9))
for epoch in range(10):
model.train()
run_epoch(data_gen(V, 30, 20), model,
SimpleLossCompute(model.generator, criterion, model_opt))
model.eval()
print(run_epoch(data_gen(V, 30, 5), model,
SimpleLossCompute(model.generator, criterion, None)))
def greedy_decode(model, src, src_mask, max_len, start_symbol):
memory = model.encode(src, src_mask)
ys = torch.ones(1, 1).fill_(start_symbol).type_as(src.data)
for i in range(max_len-1):
out = model.decode(memory, src_mask,
Variable(ys),
Variable(subsequent_mask(ys.size(1))
.type_as(src.data)))
prob = model.generator(out[:, -1])
_, next_word = torch.max(prob, dim = 1)
next_word = next_word.data[0]
ys = torch.cat([ys,
torch.ones(1, 1).type_as(src.data).fill_(next_word)], dim=1)
return ys
model.eval()
src = Variable(torch.LongTensor([[1,2,3,4,5,6,7,8,9,10]]) )
src_mask = Variable(torch.ones(1, 1, 10) )
print(greedy_decode(model, src, src_mask, max_len=10, start_symbol=1))
from torchtext import data, datasets
if True:
import spacy
spacy_de = spacy.load('de')
spacy_en = spacy.load('en')
def tokenize_de(text):
return [tok.text for tok in spacy_de.tokenizer(text)]
def tokenize_en(text):
return [tok.text for tok in spacy_en.tokenizer(text)]
BOS_WORD = '<s>'
EOS_WORD = '</s>'
BLANK_WORD = "<blank>"
SRC = data.Field(tokenize=tokenize_de, pad_token=BLANK_WORD)
TGT = data.Field(tokenize=tokenize_en, init_token = BOS_WORD,
eos_token = EOS_WORD, pad_token=BLANK_WORD)
MAX_LEN = 100
train, val, test = datasets.IWSLT.splits(
exts=('.de', '.en'), fields=(SRC, TGT),
filter_pred=lambda x: len(vars(x)['src']) <= MAX_LEN and
len(vars(x)['trg']) <= MAX_LEN)
MIN_FREQ = 2
SRC.build_vocab(train.src, min_freq=MIN_FREQ)
TGT.build_vocab(train.trg, min_freq=MIN_FREQ)
class MyIterator(data.Iterator):
def create_batches(self):
if self.train:
def pool(d, random_shuffler):
for p in data.batch(d, self.batch_size * 100):
p_batch = data.batch(
sorted(p, key=self.sort_key),
self.batch_size, self.batch_size_fn)
for b in random_shuffler(list(p_batch)):
yield b
self.batches = pool(self.data(), self.random_shuffler)
else:
self.batches = []
for b in data.batch(self.data(), self.batch_size,
self.batch_size_fn):
self.batches.append(sorted(b, key=self.sort_key))
def rebatch(pad_idx, batch):
"Fix order in torchtext to match ours"
src, trg = batch.src.transpose(0, 1), batch.trg.transpose(0, 1)
return Batch(src, trg, pad_idx)
# # Skip if not interested in multigpu.
# # class MultiGPULossCompute:
# # "A multi-gpu loss compute and train function."
# # def __init__(self, generator, criterion, devices, opt=None, chunk_size=5):
# # # Send out to different gpus.
# # self.generator = generator
# # self.criterion = nn.parallel.replicate(criterion,
# # devices=devices)
# # self.opt = opt
# # self.devices = devices
# # self.chunk_size = chunk_size
# # def __call__(self, out, targets, normalize):
# # total = 0.0
# # generator = nn.parallel.replicate(self.generator,
# # devices=self.devices)
# # out_scatter = nn.parallel.scatter(out,
# # target_gpus=self.devices)
# # out_grad = [[] for _ in out_scatter]
# # targets = nn.parallel.scatter(targets,
# # target_gpus=self.devices)
# # # Divide generating into chunks.
# # chunk_size = self.chunk_size
# # for i in range(0, out_scatter[0].size(1), chunk_size):
# # # Predict distributions
# # out_column = [[Variable(o[:, i:i+chunk_size].data,
# # requires_grad=self.opt is not None)]
# # for o in out_scatter]
# # gen = nn.parallel.parallel_apply(generator, out_column)
# # # Compute loss.
# # y = [(g.contiguous().view(-1, g.size(-1)),
# # t[:, i:i+chunk_size].contiguous().view(-1))
# # for g, t in zip(gen, targets)]
# # loss = nn.parallel.parallel_apply(self.criterion, y)
# # # Sum and normalize loss
# # l = nn.parallel.gather(loss,
# # target_device=self.devices[0])
# # l = l.sum()[0] / normalize
# # total += l.data[0]
# # # Backprop loss to output of transformer
# # if self.opt is not None:
# # l.backward()
# # for j, l in enumerate(loss):
# # out_grad[j].append(out_column[j][0].grad.data.clone())
# # # Backprop all loss through transformer.
# # if self.opt is not None:
# # out_grad = [Variable(torch.cat(og, dim=1)) for og in out_grad]
# # o1 = out
# # o2 = nn.parallel.gather(out_grad,
# # target_device=self.devices[0])
# # o1.backward(gradient=o2)
# # self.opt.step()
# # self.opt.optimizer.zero_grad()
# # return total * normalize
# # GPUs to use
devices = [0, 1, 2, 3]
if True:
pad_idx = TGT.vocab.stoi["<blank>"]
model = make_model(len(SRC.vocab), len(TGT.vocab), N=6)
model.cuda()
criterion = LabelSmoothing(size=len(TGT.vocab), padding_idx=pad_idx, smoothing=0.1)
criterion.cuda()
BATCH_SIZE = 12000
train_iter = MyIterator(train, batch_size=BATCH_SIZE, device=0,
repeat=False, sort_key=lambda x: (len(x.src), len(x.trg)),
batch_size_fn=batch_size_fn, train=True)
valid_iter = MyIterator(val, batch_size=BATCH_SIZE, device=0,
repeat=False, sort_key=lambda x: (len(x.src), len(x.trg)),
batch_size_fn=batch_size_fn, train=False)
model_par = nn.DataParallel(model, device_ids=devices)
None
# #!wget https://s3.amazonaws.com/opennmt-models/iwslt.pt
if False:
model_opt = NoamOpt(model.src_embed[0].d_model, 1, 2000,
torch.optim.Adam(model.parameters(), lr=0, betas=(0.9, 0.98), eps=1e-9))
for epoch in range(10):
model_par.train()
run_epoch((rebatch(pad_idx, b) for b in train_iter),
model_par,
MultiGPULossCompute(model.generator, criterion,
devices=devices, opt=model_opt))
model_par.eval()
loss = run_epoch((rebatch(pad_idx, b) for b in valid_iter),
model_par,
MultiGPULossCompute(model.generator, criterion,
devices=devices, opt=None))
print(loss)
else:
model = torch.load("iwslt.pt") #change to training set
for i, batch in enumerate(valid_iter):
src = batch.src.transpose(0, 1)[:1]
src_mask = (src != SRC.vocab.stoi["<blank>"]).unsqueeze(-2)
out = greedy_decode(model, src, src_mask,
max_len=60, start_symbol=TGT.vocab.stoi["<s>"])
print("Translation:", end="\t")
for i in range(1, out.size(1)):
sym = TGT.vocab.itos[out[0, i]]
if sym == "</s>": break
print(sym, end =" ")
print()
print("Target:", end="\t")
for i in range(1, batch.trg.size(0)):
sym = TGT.vocab.itos[batch.trg.data[i, 0]]
if sym == "</s>": break
print(sym, end =" ")
print()
break
if False:
model.src_embed[0].lut.weight = model.tgt_embeddings[0].lut.weight
model.generator.lut.weight = model.tgt_embed[0].lut.weight
# def average(model, models):
# "Average models into model"
# for ps in zip(*[m.params() for m in [model] + models]):
# p[0].copy_(torch.sum(*ps[1:]) / len(ps[1:]))
model, SRC, TGT = torch.load("en-de-model.pt")
model.eval()
sent = "▁The ▁log ▁file ▁can ▁be ▁sent ▁secret ly ▁with ▁email ▁or ▁FTP ▁to ▁a ▁specified ▁receiver".split()
src = torch.LongTensor([[SRC.stoi[w] for w in sent]])
src = Variable(src)
src_mask = (src != SRC.stoi["<blank>"]).unsqueeze(-2)
out = greedy_decode(model, src, src_mask,
max_len=60, start_symbol=TGT.stoi["<s>"])
print("Translation:", end="\t")
trans = "<s> "
for i in range(1, out.size(1)):
sym = TGT.itos[out[0, i]]
if sym == "</s>": break
trans += sym + " "
print(trans)
tgt_sent = trans.split()
def draw(data, x, y, ax):
seaborn.heatmap(data,
xticklabels=x, square=True, yticklabels=y, vmin=0.0, vmax=1.0,
cbar=False, ax=ax)
for layer in range(1, 6, 2):
fig, axs = plt.subplots(1,4, figsize=(20, 10))
print("Encoder Layer", layer+1)
for h in range(4):
draw(model.encoder.layers[layer].self_attn.attn[0, h].data,
sent, sent if h ==0 else [], ax=axs[h])
plt.show()
for layer in range(1, 6, 2):
fig, axs = plt.subplots(1,4, figsize=(20, 10))
print("Decoder Self Layer", layer+1)
for h in range(4):
draw(model.decoder.layers[layer].self_attn.attn[0, h].data[:len(tgt_sent), :len(tgt_sent)],
tgt_sent, tgt_sent if h ==0 else [], ax=axs[h])
plt.show()
print("Decoder Src Layer", layer+1)
fig, axs = plt.subplots(1,4, figsize=(20, 10))
for h in range(4):
draw(model.decoder.layers[layer].self_attn.attn[0, h].data[:len(tgt_sent), :len(sent)],
sent, tgt_sent if h ==0 else [], ax=axs[h])
plt.show()