End of training
Browse files- README.md +100 -0
- config.json +91 -0
- model.safetensors +3 -0
- runs/Nov20_10-12-39_94090b128102/events.out.tfevents.1732097583.94090b128102.1216.0 +3 -0
- runs/Nov20_10-24-44_94090b128102/events.out.tfevents.1732098289.94090b128102.1216.1 +3 -0
- runs/Nov20_10-39-04_94090b128102/events.out.tfevents.1732099149.94090b128102.1216.2 +3 -0
- special_tokens_map.json +37 -0
- tokenizer.json +0 -0
- tokenizer_config.json +59 -0
- training_args.bin +3 -0
- vocab.txt +0 -0
README.md
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---
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library_name: transformers
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license: cc-by-4.0
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base_model: NazaGara/NER-fine-tuned-BETO
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tags:
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- generated_from_trainer
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datasets:
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- biobert_json
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metrics:
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- precision
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- recall
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- f1
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- accuracy
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model-index:
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- name: NER-finetuning-BETO-CM-V3
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results:
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- task:
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name: Token Classification
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type: token-classification
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dataset:
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name: biobert_json
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type: biobert_json
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config: Biobert_json
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split: validation
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args: Biobert_json
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metrics:
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- name: Precision
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type: precision
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value: 0.9326628771316134
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- name: Recall
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type: recall
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value: 0.9424500165690931
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- name: F1
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type: f1
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value: 0.9375309048953355
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- name: Accuracy
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type: accuracy
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value: 0.977440285204991
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---
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<!-- This model card has been generated automatically according to the information the Trainer had access to. You
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should probably proofread and complete it, then remove this comment. -->
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# NER-finetuning-BETO-CM-V3
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This model is a fine-tuned version of [NazaGara/NER-fine-tuned-BETO](https://huggingface.co/NazaGara/NER-fine-tuned-BETO) on the biobert_json dataset.
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It achieves the following results on the evaluation set:
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- Loss: 0.1452
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- Precision: 0.9327
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- Recall: 0.9425
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- F1: 0.9375
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- Accuracy: 0.9774
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## Model description
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More information needed
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## Intended uses & limitations
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More information needed
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## Training and evaluation data
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More information needed
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## Training procedure
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### Training hyperparameters
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The following hyperparameters were used during training:
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- learning_rate: 2e-05
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- train_batch_size: 8
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- eval_batch_size: 8
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- seed: 42
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- optimizer: Use adamw_torch with betas=(0.9,0.999) and epsilon=1e-08 and optimizer_args=No additional optimizer arguments
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- lr_scheduler_type: linear
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- num_epochs: 10
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### Training results
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| Training Loss | Epoch | Step | Validation Loss | Precision | Recall | F1 | Accuracy |
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|:-------------:|:-----:|:-----:|:---------------:|:---------:|:------:|:------:|:--------:|
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| 0.0459 | 1.0 | 1224 | 0.1312 | 0.9209 | 0.9487 | 0.9346 | 0.9721 |
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| 0.0457 | 2.0 | 2448 | 0.1208 | 0.9199 | 0.9584 | 0.9388 | 0.9761 |
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| 0.0473 | 3.0 | 3672 | 0.1092 | 0.9341 | 0.9527 | 0.9433 | 0.9797 |
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| 0.0335 | 4.0 | 4896 | 0.1123 | 0.9321 | 0.9482 | 0.9401 | 0.9774 |
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| 0.0299 | 5.0 | 6120 | 0.1190 | 0.9313 | 0.9475 | 0.9393 | 0.9768 |
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| 0.0273 | 6.0 | 7344 | 0.1224 | 0.9335 | 0.9444 | 0.9389 | 0.9774 |
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| 0.0208 | 7.0 | 8568 | 0.1354 | 0.9356 | 0.9463 | 0.9409 | 0.9782 |
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| 0.02 | 8.0 | 9792 | 0.1371 | 0.9302 | 0.9434 | 0.9368 | 0.9774 |
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| 0.0158 | 9.0 | 11016 | 0.1408 | 0.9320 | 0.9448 | 0.9383 | 0.9777 |
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| 0.0153 | 10.0 | 12240 | 0.1452 | 0.9327 | 0.9425 | 0.9375 | 0.9774 |
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### Framework versions
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- Transformers 4.46.2
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- Pytorch 2.5.1+cu121
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- Datasets 3.1.0
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- Tokenizers 0.20.3
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config.json
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{
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"_name_or_path": "NazaGara/NER-fine-tuned-BETO",
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"architectures": [
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"BertForTokenClassification"
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],
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"attention_probs_dropout_prob": 0.1,
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"classifier_dropout": null,
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"gradient_checkpointing": false,
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"hidden_act": "gelu",
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"hidden_dropout_prob": 0.1,
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"hidden_size": 768,
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"id2label": {
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"0": "B_CANCER_CONCEPT",
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"1": "B_CHEMOTHERAPY",
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"2": "B_DATE",
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"3": "B_DRUG",
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"4": "B_FAMILY",
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"5": "B_FREQ",
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"6": "B_IMPLICIT_DATE",
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"7": "B_INTERVAL",
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"8": "B_METRIC",
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"9": "B_OCURRENCE_EVENT",
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"10": "B_QUANTITY",
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"11": "B_RADIOTHERAPY",
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"12": "B_SMOKER_STATUS",
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"13": "B_STAGE",
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"14": "B_SURGERY",
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"15": "B_TNM",
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"16": "I_CANCER_CONCEPT",
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"17": "I_DATE",
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"18": "I_DRUG",
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"19": "I_FAMILY",
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"20": "I_FREQ",
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"21": "I_IMPLICIT_DATE",
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"22": "I_INTERVAL",
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"23": "I_METRIC",
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"24": "I_OCURRENCE_EVENT",
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"25": "I_SMOKER_STATUS",
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"26": "I_STAGE",
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"27": "I_SURGERY",
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"28": "I_TNM",
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"29": "O"
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},
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"initializer_range": 0.02,
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"intermediate_size": 3072,
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"label2id": {
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"B_CANCER_CONCEPT": 0,
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"B_CHEMOTHERAPY": 1,
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"B_DATE": 2,
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"B_DRUG": 3,
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"B_FAMILY": 4,
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"B_FREQ": 5,
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"B_IMPLICIT_DATE": 6,
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"B_INTERVAL": 7,
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"B_METRIC": 8,
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"B_OCURRENCE_EVENT": 9,
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"B_QUANTITY": 10,
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"B_RADIOTHERAPY": 11,
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"B_SMOKER_STATUS": 12,
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"B_STAGE": 13,
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"B_SURGERY": 14,
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"B_TNM": 15,
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"I_CANCER_CONCEPT": 16,
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"I_DATE": 17,
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"I_DRUG": 18,
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"I_FAMILY": 19,
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"I_FREQ": 20,
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"I_IMPLICIT_DATE": 21,
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"I_INTERVAL": 22,
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"I_METRIC": 23,
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"I_OCURRENCE_EVENT": 24,
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"I_SMOKER_STATUS": 25,
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"I_STAGE": 26,
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"I_SURGERY": 27,
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"I_TNM": 28,
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"O": 29
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},
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"layer_norm_eps": 1e-12,
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"max_position_embeddings": 512,
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"model_type": "bert",
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"num_attention_heads": 12,
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"num_hidden_layers": 12,
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"output_past": true,
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"pad_token_id": 1,
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"position_embedding_type": "absolute",
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"torch_dtype": "float32",
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"transformers_version": "4.46.2",
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"type_vocab_size": 2,
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"use_cache": true,
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"vocab_size": 31002
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}
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model.safetensors
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version https://git-lfs.github.com/spec/v1
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oid sha256:352dafbddd49f7c489d719c8d3a53ea4e31c282e045349fdb8eeb53da4024ec3
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size 437156776
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runs/Nov20_10-12-39_94090b128102/events.out.tfevents.1732097583.94090b128102.1216.0
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runs/Nov20_10-24-44_94090b128102/events.out.tfevents.1732098289.94090b128102.1216.1
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runs/Nov20_10-39-04_94090b128102/events.out.tfevents.1732099149.94090b128102.1216.2
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version https://git-lfs.github.com/spec/v1
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special_tokens_map.json
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{
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"cls_token": {
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"content": "[CLS]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false
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},
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"mask_token": {
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"content": "[MASK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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},
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"content": "[PAD]",
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"normalized": false,
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"rstrip": false,
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"single_word": false
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},
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"sep_token": {
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"content": "[SEP]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false
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},
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"unk_token": {
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"content": "[UNK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false
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}
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}
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tokenizer.json
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tokenizer_config.json
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{
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"add_prefix_space": true,
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"added_tokens_decoder": {
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"0": {
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"content": "[MASK]",
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"lstrip": false,
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"special": true
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},
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"1": {
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"content": "[PAD]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"3": {
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"content": "[UNK]",
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"4": {
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"content": "[CLS]",
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"lstrip": false,
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"normalized": false,
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"special": true
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},
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"5": {
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"content": "[SEP]",
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"lstrip": false,
|
39 |
+
"normalized": false,
|
40 |
+
"rstrip": false,
|
41 |
+
"single_word": false,
|
42 |
+
"special": true
|
43 |
+
}
|
44 |
+
},
|
45 |
+
"clean_up_tokenization_spaces": false,
|
46 |
+
"cls_token": "[CLS]",
|
47 |
+
"do_basic_tokenize": true,
|
48 |
+
"do_lower_case": false,
|
49 |
+
"mask_token": "[MASK]",
|
50 |
+
"model_max_length": 512,
|
51 |
+
"never_split": null,
|
52 |
+
"num_labels": 9,
|
53 |
+
"pad_token": "[PAD]",
|
54 |
+
"sep_token": "[SEP]",
|
55 |
+
"strip_accents": false,
|
56 |
+
"tokenize_chinese_chars": true,
|
57 |
+
"tokenizer_class": "BertTokenizer",
|
58 |
+
"unk_token": "[UNK]"
|
59 |
+
}
|
training_args.bin
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:ee7c094c4334ebb1b5d025d9d9902ef7516abdeb6d9ba33207dab5f7ab8bd203
|
3 |
+
size 5304
|
vocab.txt
ADDED
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|
|