ctheodoris commited on
Commit
59ee7f9
1 Parent(s): 0f88377

remove testing prints

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Files changed (1) hide show
  1. geneformer/in_silico_perturber.py +0 -3
geneformer/in_silico_perturber.py CHANGED
@@ -1300,7 +1300,6 @@ class InSilicoPerturber:
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  summary_stat=None,
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  silent=True,
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  )
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- print("TESTINGGGG")
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  # need to remove overexpressed gene and cls/eos to quantify cosine shifts
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  if self.perturb_type == "overexpress":
@@ -1387,8 +1386,6 @@ class InSilicoPerturber:
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  del perturbation_cls_emb
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  del cls_cos_sims
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  del gene_cos_sims
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- print("test")
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- print(dir())
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  # save dict to disk every self.clear_mem_ncells/10 (default 100) cells
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  if i % max(1,self.clear_mem_ncells/10) == 0:
 
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  summary_stat=None,
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  silent=True,
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  )
 
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  # need to remove overexpressed gene and cls/eos to quantify cosine shifts
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  if self.perturb_type == "overexpress":
 
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  del perturbation_cls_emb
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  del cls_cos_sims
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  del gene_cos_sims
 
 
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  # save dict to disk every self.clear_mem_ncells/10 (default 100) cells
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  if i % max(1,self.clear_mem_ncells/10) == 0: