Fix isp perturb_group dims, reformat cell states dict to keyed, add attn mask c2679c4 Christina Theodoris commited on Aug 2, 2023
Add sorting for aggregating data for goal state shifts 50e921d Christina Theodoris commited on Jul 19, 2023
Update isp to allow modeling single perturbation in multiple cells as batches acd253c Christina Theodoris commited on Jul 16, 2023
Correct order of state dict in in silico perturber stats and tensor dims of alt state emb in in silico perturber 3d06203 Christina Theodoris commited on Jul 8, 2023
Add explanation of output columns and sort by largest shift 3072225 Christina Theodoris commited on Jul 8, 2023
Modify documentation for modeling only 2 cell states 019165f Christina Theodoris commited on Jun 27, 2023
Add instructions for modeling only 2 states and modify stats script for that option 912860d Christina Theodoris commited on Jun 27, 2023
Add mixture model option for gene-gene interaction stats dc1481d Christina Theodoris commited on Jun 22, 2023
Add stats with mixture model to determine whether test perturbation is in impact component d20ad0a Christina Theodoris commited on Jun 20, 2023
Fixes to stats and adding gene dict attempt number 2 (#13) 42e9bf9 ctheodoris commited on Jun 7, 2023