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ctheodoris
/
Geneformer
like
209
Fill-Mask
Transformers
Safetensors
ctheodoris/Genecorpus-30M
bert
single-cell
genomics
Inference Endpoints
License:
apache-2.0
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98ce6d7
Geneformer
/
examples
15 contributors
History:
22 commits
Christina Theodoris
Add note to recommend tuning hyperparameters for downstream applications
98ce6d7
over 1 year ago
pretraining_new_model
Update links including unsorted example lengths file
over 1 year ago
cell_classification.ipynb
Safe
96.1 kB
Add note to recommend tuning hyperparameters for downstream applications
over 1 year ago
gene_classification.ipynb
Safe
168 kB
Add note to recommend tuning hyperparameters for downstream applications
over 1 year ago
hyperparam_optimiz_for_disease_classifier.py
Safe
6.77 kB
Add example for hyperparameter optimization for disease classifier
over 1 year ago
in_silico_perturbation.ipynb
Safe
3.37 kB
Add in silico perturbation example notebook.
over 1 year ago
tokenizing_scRNAseq_data.ipynb
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3.25 kB
Add instructions to convert gene annotations w/ Ensembl Biomart
over 1 year ago
