Instruction: Provide the Gene Ontology term that matches the characteristics of a given protein sequence.

Input: MGTARFLSAVLLLSVLLMVTFPALLSAEYHDGRVDICSLPSDSGDCLRFFEMWYFDGTTCTKFVYGGYGGNDNRFPTEKACMKRCAKA

Output: extracellular region ; potassium channel regulator activity ; serine-type endopeptidase inhibitor activity ; toxin activity ; envenomation resulting in negative regulation of voltage-gated potassium channel activity in another organism ; negative regulation of peptidase activity


GO Terms Prediction

Instruction: Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.

Output: allantoicase activity ; allantoin catabolic process ; purine nucleobase metabolic process


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: ATP binding ; FMN adenylyltransferase activity ; riboflavin kinase activity ; FAD biosynthetic process ; FMN biosynthetic process ; phosphorylation ; riboflavin biosynthetic process


Instruction: Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.

Output: cytoplasm ; cystathionine gamma-synthase activity ; cystathionine gamma-synthase activity (acts on O-phosphohomoserine) ; pyridoxal phosphate binding ; methionine biosynthetic process ; transsulfuration


Instruction: Provide the Gene Ontology term that matches the characteristics of a given protein sequence.

Output: chloroplast ; 4 iron, 4 sulfur cluster binding ; ATP binding ; metal ion binding ; oxidoreductase activity, acting on iron-sulfur proteins as donors ; oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor ; light-independent chlorophyll biosynthetic process ; photosynthesis, dark reaction


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: postsynaptic membrane ; G protein-coupled acetylcholine receptor activity ; regulation of locomotion


Instruction: Predict the specific  Gene Ontology term that represents the characteristics of a given protein sequence.

Output: host cell nucleus ; DNA binding ; DNA-binding transcription factor activity ; nucleotide binding ; DNA replication ; regulation of DNA replication ; viral DNA genome replication


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: host cell nucleus ; T=25 icosahedral viral capsid ; structural molecule activity ; microtubule-dependent intracellular transport of viral material towards nucleus ; viral entry into host cell


Instruction: Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.

Input: MSWQTYVDDHLLCEIEGNHLTHAAILGQDGSVWAKSASFPQFKPEEITGIMNDFNEPGTLAPTGLYIGGTKYMVIQGEPGSVIRGKKGPGGVTVKKTNLALVIGIYDEPMTPGQCNMIVERLGDYLIEQGL

Output: cytoplasm ; cytoskeleton ; actin binding


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Input: MKTLPKERRYETLSYLPPLTDQQIAKQVEFLLDQGFIPGVEFEEDPQPETHFWTMWKLPFFGGATANEVLAEVRECRSENPNCYIRVIGFDNIKQCQTVSFIVHKPNQNQGRY

Output: carboxysome ; ribulose-bisphosphate carboxylase activity ; photorespiration ; reductive pentose-phosphate cycle


Instruction: Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.

Output: DNA binding ; DNA-directed DNA polymerase activity ; exonuclease activity ; metal ion binding ; DNA replication


Instruction: Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.

Input: MEITSVNHICFSVSDLNTSIQFYKDILHGDLLVSGRTTAYLTIGHTWIALNQEKNIPRNEISHSYTHIAFSIDEEDFQQWIQWLKENQVNILKGRPRDIKDKKSIYFTDPDGHKIELHTGTLKDRMEYYKCENTHMQFYDEF

Output: cytoplasm ; magnesium ion binding ; transferase activity, transferring alkyl or aryl (other than methyl) groups ; response to antibiotic


Instruction: Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.

Output: DNA binding ; serine-type endopeptidase activity ; DNA repair ; DNA replication ; negative regulation of DNA-templated transcription ; proteolysis ; SOS response


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: plasma membrane ; ATP binding ; ATP hydrolysis activity ; ATPase-coupled phosphate ion transmembrane transporter activity ; inorganic phosphate transmembrane transporter activity


Instruction: Predict the specific  Gene Ontology term that represents the characteristics of a given protein sequence.

Output: ketol-acid reductoisomerase activity ; magnesium ion binding ; NADP binding ; isoleucine biosynthetic process ; valine biosynthetic process


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Input: MSNFTAEDKAAITSLWGKVNVEDAGGETLGRLLVVYPWTQRFFDSFGSLSSPSAIMGNPKVKAHGVKVLTSLGEAIKNLDDLKGTFGQLSELHCDKLHVDPENFRLLGNVLVTVLAILHGKEFTPEVQASWQKMVAGVASALASRYH

Output: hemoglobin complex ; heme binding ; metal ion binding ; oxygen binding ; oxygen carrier activity


Instruction: Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.

Output: host cell Golgi membrane ; host cell junction ; membrane ; viral envelope ; virion membrane


Instruction: Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.

Output: extracellular region ; killing of cells of another organism


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Input: PGITXTSLHVAPGARLAVKGDIPAGAKSWVINLGKGENDIMLHFNARFDAHGDIRTIV

Output: extracellular region ; carbohydrate binding


Instruction: Provide the Gene Ontology term that matches the characteristics of a given protein sequence.

Input: FLPFIAGMAANFLPKIFCAISKKC

Output: extracellular region ; defense response to bacterium


Instruction: Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.

Input: GKFSVFGKILRSIAKVFKGVGKVRKQFKTASDLDKNQ

Output: extracellular region ; toxin activity ; defense response to bacterium ; hemolysis by symbiont of host erythrocytes ; killing of cells of another organism


Instruction: Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.

Input: ADCLNEGDWCADWSGPSCCGEMWCSCPGFGKCRCKK

Output: extracellular region ; sodium channel regulator activity ; toxin activity ; modulation of process of another organism


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Input: PALIPFPRV

Output: extracellular region ; neuropeptide signaling pathway ; regulation of smooth muscle contraction


Instruction: Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.

Input: NYLHDTVGRLWGPSRAGLLDGLDWMVGDVQSR

Output: serine-type peptidase activity ; toxin activity ; blood coagulation ; fibrinolysis ; proteolysis


Instruction: Predict the specific  Gene Ontology term that represents the characteristics of a given protein sequence.

Output: DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; metal ion binding ; DNA-templated transcription


Instruction: Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.

Output: ATP binding ; ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor ; deoxyribonucleotide biosynthetic process ; DNA replication


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: plasma membrane ; metal ion binding ; oxidoreductase activity ; fatty acid biosynthetic process


Instruction: Predict the GO term based on the protein sequence.

Output: deoxyribonuclease IV (phage-T4-induced) activity ; DNA binding ; DNA-(apurinic or apyrimidinic site) endonuclease activity ; phosphoric diester hydrolase activity ; zinc ion binding ; base-excision repair


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Input: MVKLALVVIFLLLASLFQPLTAQSSCPGNKKETWPELIGVPAKFAREIIQKENSKLTNVPSVLNGSPVTKDFRCERVRLFVNVLDFVVQIPRVG

Output: extracellular region ; vacuole ; serine-type endopeptidase inhibitor activity ; negative regulation of peptidase activity ; response to wounding


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Input: MDILKDKIRSEGIVLSEHVLKVDAFLNHQIDPQLMQQVGHAFAMRFRDQGITKIVTIEASGIAPAVMAGLELGVPVIFARKYQSLTLKDNLYISKVFSFTKQTESTIAISAKHLNAHDHVLVIDDFLANGHAAKALIDLIGQAGASIAGLGIVIEKSFQDGRALLESEGYRVESLARVKSLAGGQVEFLD

Output: cytoplasm ; xanthine phosphoribosyltransferase activity ; purine ribonucleoside salvage ; xanthine metabolic process ; XMP salvage


Instruction: Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; ATP binding ; metal ion binding ; methionine-tRNA ligase activity ; tRNA binding ; methionyl-tRNA aminoacylation


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: cytoplasm ; FAD binding ; UDP-N-acetylmuramate dehydrogenase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: cytoplasm ; glycine hydroxymethyltransferase activity ; pyridoxal phosphate binding ; glycine biosynthetic process from serine ; tetrahydrofolate interconversion


Instruction: Provide the Gene Ontology term that matches the characteristics of a given protein sequence.

Output: extracellular region ; raffinose alpha-galactosidase activity ; polysaccharide catabolic process


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Output: chloroplast thylakoid membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; ATP synthesis coupled electron transport


Instruction: Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; 3-methyl-2-oxobutanoate hydroxymethyltransferase activity ; metal ion binding ; pantothenate biosynthetic process


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: plasma membrane ; GTP binding ; GTPase activity ; ribosome binding ; translation elongation factor activity ; positive regulation of translation


Instruction: Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.

Input: MRAYWFDNLEGDQRQPHDSGRAVDPAYLSKLGVLYHHISSQSEVDELAKARDYKNRDEITVSPEKMGDIYEEKVKSFFHEHLHEDEEIRYILDGAGYFDVRSEGDDWVRIWLEKGDLIILPSGIYHRFTTDEQNYTKAMRLFKDEPKWTPLNRGEETDENQFRQEYLKLRQGLAA

Output: cytoplasm ; nucleus ; acireductone dioxygenase (Ni2+-requiring) activity ; acireductone dioxygenase  activity ; iron ion binding ; nickel cation binding ; L-methionine salvage from methylthioadenosine ; methionine metabolic process


Instruction: Provide the Gene Ontology term that matches the characteristics of a given protein sequence.

Output: endoplasmic reticulum ; endoplasmic reticulum membrane ; dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity ; oligosaccharide-lipid intermediate biosynthetic process ; protein N-linked glycosylation


Instruction: Determine the Gene Ontology term that best describes the attributes of a given protein sequence.

Output: DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Output: cytoplasm ; iron ion binding ; N(6)-L-threonylcarbamoyladenine synthase activity ; tRNA threonylcarbamoyladenosine modification


Instruction: Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.

Output: cytoplasm ; carbohydrate derivative binding ; glucose-6-phosphate isomerase activity ; carbohydrate derivative metabolic process ; gluconeogenesis ; glycolytic process


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: ATP binding ; glycerol kinase activity ; glycerol catabolic process ; glycerol metabolic process ; glycerol-3-phosphate metabolic process ; phosphorylation


Instruction: Determine the Gene Ontology term that best describes the attributes of a given protein sequence.

Output: cytoplasm ; aminopeptidase activity ; dipeptidyl-peptidase activity ; serine-type peptidase activity ; proteolysis


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: cytoplasm ; ATP binding ; ATP hydrolysis activity ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Output: cytoplasm ; nuclear speck ; nucleus ; calmodulin binding ; DNA binding ; DNA-binding transcription factor activity ; cell differentiation ; male sex determination ; sex differentiation


Instruction: Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.

Output: cytoplasm ; aspartate-tRNA ligase activity ; aspartate-tRNA(Asn) ligase activity ; ATP binding ; nucleic acid binding ; aspartyl-tRNA aminoacylation


Instruction: Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; protein dimerization activity ; DNA-templated transcription


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: cytoplasm ; ATP-dependent peptidase activity ; serine-type endopeptidase activity ; proteolysis


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: cytoplasm ; diaminopimelate epimerase activity ; lysine biosynthetic process via diaminopimelate


Instruction: Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.

Input: MTTDTHTLHIEEILELLPHRFPFLLVDRVLDFEKGKFLRAVKNVSFNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSAGKLAPGELYYFAAIDEARFKRPVQPGDQMILEVEFIKERRGVARFKGVAKVDGEVACEASMMCARRREA

Output: cytoplasm ; (3R)-hydroxyacyl- dehydratase activity ; (3R)-hydroxymyristoyl- dehydratase activity ; fatty acid biosynthetic process ; lipid A biosynthetic process


Instruction: Provide the Gene Ontology term that matches the characteristics of a given protein sequence.

Output: ATP binding ; GMP synthase activity ; glutamine metabolic process


Instruction: Determine the Gene Ontology term that best describes the attributes of a given protein sequence.

Output: 4 iron, 4 sulfur cluster binding ; lyase activity ; metal ion binding ; cobalamin biosynthetic process ; thiamine biosynthetic process


Instruction: Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.

Output: cytoplasm ; ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; single-stranded DNA binding ; DNA recombination ; DNA repair ; SOS response


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Output: FMN binding ; pyridoxamine-phosphate oxidase activity ; pyridoxine biosynthetic process


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Input: MKLLTVAFSLLLLGQVHASPLVLDKRSSCQLGDVWDLNAADAACSASCAIQHGDKHGGHCDKNKVCVCN

Output: extracellular region ; membrane ; other organism cell membrane ; lipid binding ; defense response to bacterium ; immune system process


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: mitochondrion ; 4 iron, 4 sulfur cluster binding ; lipoate synthase activity ; metal ion binding ; protein lipoylation


Instruction: Provide the Gene Ontology term that matches the characteristics of a given protein sequence.

Output: endosome membrane ; phagophore assembly site membrane ; vacuolar membrane ; autophagy ; protein transport


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: cytoplasm ; adenylosuccinate synthase activity ; AMP binding ; GMP binding ; GTP binding ; magnesium ion binding ; sulfinylpropanyl adenylate synthase ; 'de novo' AMP biosynthetic process ; cellular response to cadmium ion ; fumarate metabolic process


Instruction: Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.

Output: host cell mitochondrion ; host cell nucleus ; virion component ; RNA binding ; RNA-dependent RNA polymerase activity ; 7-methylguanosine mRNA capping ; cap snatching ; DNA-templated transcription ; suppression by virus of host mRNA transcription via inhibition of RNA polymerase II activity ; suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity ; viral RNA genome replication


Instruction: Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.

Output: ATP-binding cassette (ABC) transporter complex ; ABC-type glycerol-3-phosphate transporter activity ; ATP binding ; ATP hydrolysis activity ; carbohydrate transport


Instruction: Predict the GO term based on the protein sequence.

Output: magnesium ion binding ; monooxygenase activity ; ribulose-bisphosphate carboxylase activity ; reductive pentose-phosphate cycle


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: cytoplasm ; FAD binding ; UDP-N-acetylmuramate dehydrogenase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape


Instruction: Provide the Gene Ontology term that matches the characteristics of a given protein sequence.

Output: glutamyl-tRNA reductase activity ; NADP binding ; protoporphyrinogen IX biosynthetic process


Instruction: Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.

Output: glutamyl-tRNA reductase activity ; NADP binding ; chlorophyll biosynthetic process ; protoporphyrinogen IX biosynthetic process


Instruction: Determine the Gene Ontology term that best describes the attributes of a given protein sequence.

Output: cytoplasm ; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity ; RNA binding


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: cytoplasm ; ATP binding ; glutamate 5-kinase activity ; RNA binding ; L-proline biosynthetic process ; phosphorylation


Instruction: Provide the Gene Ontology term that matches the characteristics of a given protein sequence.

Output: 2 iron, 2 sulfur cluster binding ; dihydroxy-acid dehydratase activity ; magnesium ion binding ; isoleucine biosynthetic process ; valine biosynthetic process


Instruction: Determine the Gene Ontology term that best describes the attributes of a given protein sequence.

Output: cytoplasm ; L-lactate dehydrogenase activity ; glycolytic process


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Output: ATP binding ; tRNA dimethylallyltransferase activity ; tRNA processing


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding


Instruction: Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.

Input: MNIYTSILVLSYLIGSIPFGLILSYIGGLGDIRKIGSGNIGATNVFRKSKKLAVVTLILDSLKGFVSVMLAKNFSSDQTFVFMSALFSIIGHMFPVWLSFKGGKGVATLLGSIMFIEYKFVIYFTIFWIIVFVIFRYSSLSSIISTISIMLLVYTHYSANESITFLVMSLLVIVQHIENIVRIIKGKENKI

Output: plasma membrane ; acyl-phosphate glycerol-3-phosphate acyltransferase activity ; phospholipid biosynthetic process


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Input: MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG

Output: nucleosome ; nucleus ; DNA binding ; protein heterodimerization activity ; structural constituent of chromatin


Instruction: Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.

Input: MEDPSKVQLNQLTDYIMKNCLWQFHSRKWDRERQNEGILTKTKQILLGEEVDLSTPADRCYYADALCLADAYKTEYPWINDMSKDELIQLMQQLKDRIDYVTITGSLNAELTDPRY

Output: ATP binding ; carbonyl sulfide nitrogenase activity ; iron ion binding ; iron-sulfur cluster binding ; nitrogenase activity ; nitrogen fixation


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; methylthiotransferase activity ; tRNA modification


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Output: histidinol dehydrogenase activity ; NAD binding ; zinc ion binding ; histidine biosynthetic process


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: nucleolus ; small-subunit processome ; ATP binding ; ATP hydrolysis activity ; RNA binding ; RNA helicase activity ; maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: plasma membrane ; ATP binding ; ATP:ADP antiporter activity


Instruction: Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.

Output: cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; protein methylthiotransferase activity ; peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid ; tRNA modification


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Input: MKGLLQRVRSARVEVGTEVVGAIEQGILVLVGIEPQDTRASADKLLHKLLNYRVFSDVEGKMNLSLREVGGGLLLVSQFTLAADTKSGLRAGFSKAAPPALGAELFDYLLSQARIAHPTVAAGQFGADMQVHLINDGPVTFLFDT

Output: cytoplasm ; D-aminoacyl-tRNA deacylase activity ; Gly-tRNA(Ala) hydrolase activity ; Ser(Gly)-tRNA(Ala) hydrolase activity ; tRNA binding ; D-amino acid catabolic process


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: molybdopterin synthase complex ; 4 iron, 4 sulfur cluster binding ; GTP 3',8'-cyclase activity ; GTP binding ; metal ion binding ; S-adenosyl-L-methionine binding ; Mo-molybdopterin cofactor biosynthetic process


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Input: MSYNGIGLQSVRGSATSGHIQKNIANKISKPGHYESRKNQKSLMSKRADEAKQSQNKREAYKQIKSELTKHEQLRRIEVKCMDLQDELEEQGVEPDEIKARVDELRKKLNNKEFDENDAKSPTTTTPQPSRKDKQLKEDLENENKNKDGVFEYKRRYADKRN

Output: cytoplasm ; spliceosomal complex ; mRNA processing ; RNA splicing


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: cytoplasm ; aspartic-type endopeptidase activity ; protein transport ; proteolysis


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: nucleus ; ATP binding ; ATP-dependent DNA damage sensor activity ; double-stranded DNA binding ; mismatched DNA binding ; mismatch repair ; mitotic recombination


Instruction: Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.

Output: mitochondrion ; acetyl-CoA C-acetyltransferase activity ; metal ion binding ; fatty acid beta-oxidation


Instruction: Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.

Input: MDKNLLEAVKFDEKGLVCAIAQDAETKRVLMVAWMNAEALQKTVETGFAHYYSRSRQKQWMKGEESGHTQKVRELRLDCDGDTIVMLIAQNGGIACHTGRESCFYKKWNGGAWETADAVLKDEKEIYGSTH

Output: cytoplasm ; magnesium ion binding ; phosphoribosyl-AMP cyclohydrolase activity ; zinc ion binding ; histidine biosynthetic process


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: cytoplasm ; ATP binding ; metal ion binding ; NAD binding ; NAD+ kinase activity ; NAD metabolic process ; NADP biosynthetic process ; phosphorylation


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Input: MSEASGERPRVEIWTDGGCKPNPGPGGWGALLVCRGQEKELLGGDPETTNNRMELTAAAEALEALKRPCIVTLHTDSEYLRNGITRWHTGWVRRKWRNAAGDPVANMDLWQRILEAAKPHEIDWLWVKGHSGDENNERVDQLATRGREEL

Output: cytoplasm ; magnesium ion binding ; nucleic acid binding ; RNA-DNA hybrid ribonuclease activity ; RNA catabolic process


Instruction: Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.

Output: cytoplasm ; ATP binding ; UDP-N-acetylmuramate-L-alanine ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape


Instruction: Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.

Output: cytoplasm ; peptidyl-prolyl cis-trans isomerase activity ; cell cycle ; cell division ; protein folding ; protein transport


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: cytoplasm ; exosome (RNase complex) ; poly(A) binding ; RNA binding ; CUT catabolic process ; exonucleolytic catabolism of deadenylated mRNA ; exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ; polyadenylation-dependent snoRNA 3'-end processing ; U4 snRNA 3'-end processing


Instruction: Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.

Output: clathrin-coated vesicle ; early endosome membrane ; endosome ; trans-Golgi network ; phosphatidylinositol-3,5-bisphosphate binding ; lysosome organization


Instruction: Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.

Output: cytoplasm ; 4 iron, 4 sulfur cluster binding ; ATP binding ; magnesium ion binding ; sulfurtransferase activity ; tRNA binding ; tRNA thio-modification


Instruction: Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.

Output: ATP binding ; CCA tRNA nucleotidyltransferase activity ; magnesium ion binding ; tRNA binding ; RNA repair ; tRNA 3'-terminal CCA addition


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: Cul4-RING E3 ubiquitin ligase complex ; nucleoplasm ; protein ubiquitination


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: cytoplasm ; 3-dehydroquinate synthase activity ; metal ion binding ; nucleotide binding ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: plasma membrane ; metal ion binding ; phospho-N-acetylmuramoyl-pentapeptide-transferase activity ; UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: plasma membrane ; 4-hydroxybenzoate decaprenyltransferase activity ; 4-hydroxybenzoate nonaprenyltransferase activity ; 4-hydroxybenzoate octaprenyltransferase activity ; ubiquinone biosynthetic process


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: host cell membrane ; membrane ; viral occlusion body


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: endoplasmic reticulum membrane ; carbohydrate binding ; endoplasmic reticulum unfolded protein response ; ubiquitin-dependent ERAD pathway


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: eukaryotic 43S preinitiation complex ; eukaryotic 48S preinitiation complex ; eukaryotic translation initiation factor 3 complex ; RNA binding ; translation initiation factor activity ; translation initiation factor binding ; formation of cytoplasmic translation initiation complex


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: cytoplasm ; nucleolus ; nucleic acid binding ; rRNA (adenine-N6-)-methyltransferase activity ; S-adenosyl-L-methionine binding ; zinc ion binding ; positive regulation of translation ; rRNA methylation


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Input: MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLREKDKHIEEVRKNKESKDPADETEAD

Output: cytoplasm ; microtubule ; neuron projection ; tubulin binding ; microtubule depolymerization ; neuron projection development ; regulation of microtubule polymerization or depolymerization


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Output: core mediator complex ; mediator complex ; transcription coactivator activity ; negative regulation of transcription by RNA polymerase II ; positive regulation of transcription elongation by RNA polymerase II ; positive regulation of transcription initiation by RNA polymerase II ; RNA polymerase II preinitiation complex assembly ; transcription open complex formation at RNA polymerase II promoter


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: cytoplasm ; iron ion binding ; N(6)-L-threonylcarbamoyladenine synthase activity ; tRNA threonylcarbamoyladenosine modification


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: cytoplasm ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape ; UDP-N-acetylgalactosamine biosynthetic process


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: extracellular region ; 1-acyl-2-lysophosphatidylserine acylhydrolase activity ; phosphatidylserine 1-acylhydrolase activity ; phospholipase A1 activity ; killing of cells of another organism ; lipid catabolic process


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: acyltransferase activity


Instruction: Provide the Gene Ontology term that matches the characteristics of a given protein sequence.

Output: host cell nucleus ; membrane ; virion membrane ; RNA binding ; structural constituent of virion ; viral budding from plasma membrane


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; manganese ion binding ; metalloaminopeptidase activity ; proteolysis


Instruction: Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.

Output: cytoplasm ; 3-phosphoshikimate 1-carboxyvinyltransferase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process


Instruction: Predict the GO term based on the protein sequence.

Output: cytosol ; succinate-CoA ligase complex ; ATP binding ; magnesium ion binding ; succinate-CoA ligase (ADP-forming) activity ; succinate-CoA ligase (GDP-forming) activity ; succinyl-CoA metabolic process ; tricarboxylic acid cycle


Instruction: Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.

Input: MGVDQPLGDNFITTSLDSLVNWARKSSIWPMTFGLACCAIEMMATGASHNDLDRFGIIFRASPRQSDCIIIAGTVTKKMLPVIKTVYEQMPEPKWVVAMGACACSGGVFDTYSVVQGIDTALPVDVYIPGCPPRPEALLYGLLKLQDKIMKDKNSFGSTIGLGERLESAA

Output: plasma membrane respiratory chain complex I ; 4 iron, 4 sulfur cluster binding ; iron ion binding ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; aerobic respiration ; electron transport coupled proton transport


Instruction: Predict the specific  Gene Ontology term that represents the characteristics of a given protein sequence.

Input: MEFFTMCMLAAGFGMAIGAFGTGIGQGLAVKNAVEGVSRNPGASGKILTTMMIGLAMIESLAIYVLVVCLIILFANPYKDVAIELAKAVVK

Output: plasma membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; lipid binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton motive force-driven ATP synthesis


Instruction: Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.

Output: HslUV protease complex ; ATP binding ; ATP hydrolysis activity ; peptidase activity ; proteasome-activating activity ; protein unfolding


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: metal ion binding ; UDP-3-O- N-acetylglucosamine deacetylase activity ; UDP-3-O-acyl-N-acetylglucosamine deacetylase activity ; lipid A biosynthetic process


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Output: DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; magnesium ion binding ; zinc ion binding ; DNA-templated transcription


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: cytosol ; ATP binding ; glutamate 5-kinase activity ; RNA binding ; L-proline biosynthetic process ; phosphorylation ; proline biosynthetic process


Instruction: Determine the Gene Ontology term that best describes the attributes of a given protein sequence.

Output: 4 iron, 4 sulfur cluster binding ; carbon-carbon lyase activity ; zinc ion binding ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; ATP binding ; ATP hydrolysis activity ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: cytoplasm ; ATP binding ; metal ion binding ; methionine-tRNA ligase activity ; methionyl-tRNA aminoacylation


Instruction: Predict the GO term based on the protein sequence.

Output: cytoplasm ; beta-N-acetylhexosaminidase activity ; N-acetyl-beta-D-galactosaminidase activity ; carbohydrate metabolic process ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; peptidoglycan turnover ; regulation of cell shape


Instruction: Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.

Output: DNA binding ; DNA ligase (NAD+) activity ; metal ion binding ; DNA repair ; DNA replication


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Output: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity ; zinc ion binding ; methionine biosynthetic process ; methylation


Instruction: Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.

Output: chloroplast thylakoid membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; ATP synthesis coupled electron transport


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: cytoplasm ; 3-methyl-2-oxobutanoate hydroxymethyltransferase activity ; metal ion binding ; pantothenate biosynthetic process


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: cytoplasm ; ATP binding ; sulfurtransferase activity ; tRNA binding ; tRNA modification


Instruction: Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.

Output: cytoplasm ; ATP binding ; serine-tRNA ligase activity ; selenocysteine biosynthetic process ; seryl-tRNA aminoacylation


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: host cell cytoplasm ; host cell endomembrane system ; membrane ; viral envelope ; virion membrane ; structural constituent of virion ; viral budding via host ESCRT complex


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Output: DNA binding ; DNA ligase (NAD+) activity ; metal ion binding ; DNA repair ; DNA replication


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: cytoplasm ; glycine hydroxymethyltransferase activity ; pyridoxal phosphate binding ; glycine biosynthetic process from serine ; tetrahydrofolate interconversion


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Output: cytoplasm ; excinuclease repair complex ; ATP binding ; ATP hydrolysis activity ; DNA binding ; excinuclease ABC activity ; nucleotide-excision repair ; SOS response


Instruction: Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.

Output: plasma membrane ; carboxy-lyase activity ; ubiquinone biosynthetic process


Instruction: Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.

Output: S-methyl-5-thioribose-1-phosphate isomerase activity ; L-methionine salvage from methylthioadenosine ; L-methionine salvage from S-adenosylmethionine


Instruction: Predict the specific  Gene Ontology term that represents the characteristics of a given protein sequence.

Output: cytoplasm ; ATP binding ; UDP-N-acetylmuramoylalanine-D-glutamate ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: GTP binding ; magnesium ion binding ; uracil phosphoribosyltransferase activity ; UMP salvage ; uracil salvage


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: membrane ; calcium ion binding ; mannosyl-oligosaccharide 1,2-alpha-mannosidase activity ; carbohydrate metabolic process ; protein glycosylation ; ubiquitin-dependent ERAD pathway


Instruction: Predict the specific  Gene Ontology term that represents the characteristics of a given protein sequence.

Output: cytoplasm ; aminoacyl-tRNA editing activity ; ATP binding ; isoleucine-tRNA ligase activity ; tRNA binding ; zinc ion binding ; isoleucyl-tRNA aminoacylation


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: cytoplasm ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; translation elongation factor activity


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: ATP binding ; magnesium ion binding ; nucleotidyltransferase activity


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: cytoplasm ; 3-phosphoshikimate 1-carboxyvinyltransferase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process


Instruction: Predict the specific  Gene Ontology term that represents the characteristics of a given protein sequence.

Output: plasma membrane ; ATP binding ; ATP hydrolysis activity ; ATPase-coupled phosphate ion transmembrane transporter activity ; inorganic phosphate transmembrane transporter activity


Instruction: Determine the Gene Ontology term that best describes the attributes of a given protein sequence.

Output: cytoplasm ; hydroxymethylbilane synthase activity ; heme biosynthetic process ; peptidyl-pyrromethane cofactor linkage ; protoporphyrinogen IX biosynthetic process


Instruction: Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.

Output: cytoplasm ; nucleus ; proteasome core complex, beta-subunit complex ; threonine-type endopeptidase activity ; proteolysis involved in protein catabolic process


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: cytoplasm ; FMN binding ; isopentenyl-diphosphate delta-isomerase activity ; magnesium ion binding ; NADPH binding ; oxidoreductase activity ; isoprenoid biosynthetic process


Instruction: Determine the Gene Ontology term that best describes the attributes of a given protein sequence.

Input: MARVTVEDCIDKVDNRFELVLLASHRARQISQGSSITVDRDNDKNPVVALREIADETLSPDDLKEDLIHSLQKHVEVDEPEPDPVTLAASAADGEDDDQPETVTFDQMSEEELLAGIEGLVPPEKNDDY

Output: DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; DNA-templated transcription


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Output: plasma membrane ; adenosylcobinamide-GDP ribazoletransferase activity ; cobalamin 5'-phosphate synthase activity ; cobalamin biosynthetic process


Instruction: Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.

Output: cytoplasm ; ATP binding ; sulfurtransferase activity ; tRNA binding ; tRNA modification


Instruction: Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.

Input: MPVTAMCLQDSKKLKKAKLTRKKVTPFPFSRMVLCLSLVFTLYVEATNARCLRPRSKELLCGSELVDILQFICGPTGFYVSKGASFRNRNRPGIVEECCFCGCSVAILESYCAAPVTNFTGREEQKS

Output: extracellular region ; growth factor activity ; hormone activity ; generation of neurons


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: nucleus ; nuclear receptor activity ; sequence-specific DNA binding ; zinc ion binding


Instruction: Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.

Output: thiocyanate methyltransferase activity ; thiol S-methyltransferase activity ; methylation


Instruction: Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.

Output: plasma membrane ; inorganic diphosphate phosphatase activity ; magnesium ion binding ; pyrophosphate hydrolysis-driven proton transmembrane transporter activity


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Input: MSLSIDVTSLPSISSSIYKHESSSTTSTLSGKSIGRSEQYVSPDAEAFNKYMLSKSPEDIGPSDSASNDPLTSFSIRSNAVKTNADAGVSMDSSTQSRPSSNVGCDQVDFSLSKGIKVNANLDSSISVSTVSKKEKSKSDHKNRKHYPRIEADSDSDEYVLDDSDSDDGKCKNCKYKKKYFALRMRMKQVAMQLIEDL

Output: host cell cytoplasm ; ATP hydrolysis activity ; magnesium ion binding ; nucleotide binding ; RNA binding ; viral genome replication


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Output: RNA binding ; tRNA pseudouridine synthase activity ; tRNA pseudouridine synthesis


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: helical viral capsid ; host cell nucleus ; ribonucleoprotein complex ; viral nucleocapsid ; RNA binding ; structural molecule activity ; viral entry into host cell ; viral penetration into host nucleus


Instruction: Provide the Gene Ontology term that matches the characteristics of a given protein sequence.

Input: MILNDSTIMRMVSDGLLISENFDRGCLTPNGYDLRVDAIDVEGRQYSEFEIGKNVHFLVSTIEILKIPDDVVGMIWTRSSFARKGIFGSFGAIDAGYHGNLTLSFFNAGSAVNLRRGERIAQIVFVKMIGSAEKPYHIRSGNYQNSRGIVKDPVAGSQIASEAKKN

Output: dCTP deaminase activity ; nucleotide binding ; dUMP biosynthetic process ; dUTP biosynthetic process


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Output: cytoplasm ; ATP binding ; RNA-3'-phosphate cyclase activity ; RNA processing


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: extracellular region


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: cytoplasm ; excinuclease repair complex ; ATP binding ; ATP hydrolysis activity ; DNA binding ; excinuclease ABC activity ; zinc ion binding ; nucleotide-excision repair ; SOS response


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity ; ATP binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; phosphorylation ; terpenoid biosynthetic process


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: cytoplasm ; glycine hydroxymethyltransferase activity ; pyridoxal phosphate binding ; glycine biosynthetic process from serine ; tetrahydrofolate interconversion


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; iron ion binding ; N(6)-L-threonylcarbamoyladenine synthase activity ; tRNA threonylcarbamoyladenosine modification


Instruction: Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytosol ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; quinolinate synthetase A activity ; 'de novo' NAD biosynthetic process from aspartate


Instruction: Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.

Output: plasma membrane ; acyl-phosphate glycerol-3-phosphate acyltransferase activity ; phospholipid biosynthetic process


Instruction: Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.

Output: cytoplasm ; L-lactate dehydrogenase activity ; carboxylic acid metabolic process


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: cytoplasm ; ATP binding ; magnesium ion binding ; phosphoribosylformylglycinamidine synthase activity ; 'de novo' IMP biosynthetic process


Instruction: Determine the Gene Ontology term that best describes the attributes of a given protein sequence.

Output: cytoplasm ; DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; protein dimerization activity ; DNA-templated transcription


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain


Instruction: Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.

Input: MLSAARLIAPAARSAIFSNAAVVRPLAAVSTQTQLVPAAPAQLSAVRSFQTTSVTKDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF

Output: mitochondrial membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; lipid binding ; proton transmembrane transporter activity ; proton motive force-driven ATP synthesis


Instruction: Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.

Input: MSSEITEGDLQKFHDEHFNAKAVNLWNVAFAQNDRGGNSESANVEYTQSVERYPDGTIRTLTDEQILWFRESEKRELMWKKEKEQLLKEKELRQKALDKERMVSSKPETNPKTPISLKELKDIEIYQNQFHYSAYEILEEEKILDNIFRKFTALPIKYWPATPIRG

Output: cytosol ; nucleus ; SMN complex ; spliceosomal snRNP assembly


Instruction: Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.

Input: MVKVESFELDHTKVKAPYVRKAGIKIGPKGDIVSKFDLRFVQPNKELLSDKGMHTLEHFLAGFMREKLDDVIDISPMGCKTGFYLTSFGDIDVKDIIEALEYSLSKVLEQEEIPAANELQCGSAKLHSLELAKSHAKQVLENGISDKFYVE

Output: iron ion binding ; S-ribosylhomocysteine lyase activity ; quorum sensing


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: lyase activity


Instruction: Predict the GO term based on the protein sequence.

Output: FMN binding ; oxidoreductase activity


Instruction: Determine the Gene Ontology term that best describes the attributes of a given protein sequence.

Output: cytoplasm ; plasma membrane ; lyase activity ; cell cycle ; cell division


Instruction: Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.

Output: cytoplasm ; 3-methyl-2-oxobutanoate hydroxymethyltransferase activity ; metal ion binding ; pantothenate biosynthetic process


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: cytidine deaminase activity ; deoxycytidine deaminase activity ; zinc ion binding


Instruction: Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.

Output: cytoplasm ; carbohydrate derivative binding ; glucosamine-6-phosphate deaminase activity ; carbohydrate metabolic process ; N-acetylglucosamine metabolic process


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: magnesium ion binding ; thiamine-phosphate diphosphorylase activity ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Output: class I DNA-(apurinic or apyrimidinic site) endonuclease activity ; damaged DNA binding ; oxidized purine nucleobase lesion DNA N-glycosylase activity ; zinc ion binding ; base-excision repair


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: plasma membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; proton-transporting ATP synthase activity, rotational mechanism


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Output: cytoplasm ; GTP binding ; GTPase activity ; metal ion binding ; tRNA modification


Instruction: Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.

Output: cytoplasm ; adenylosuccinate synthase activity ; GTP binding ; magnesium ion binding ; 'de novo' AMP biosynthetic process


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: acetyl-CoA carboxylase complex ; acetyl-CoA carboxylase activity ; ATP binding ; carboxyl- or carbamoyltransferase activity ; fatty acid biosynthetic process ; malonyl-CoA biosynthetic process


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: extracellular region ; arabinogalactan endo-1,4-beta-galactosidase activity ; glucosidase activity ; cell wall organization ; pectin catabolic process


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: cytoplasm ; preQ1 synthase activity ; queuosine biosynthetic process


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: cytoplasm ; GTP binding ; GTPase activity ; metal ion binding ; rRNA binding ; ribosomal small subunit biogenesis


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: DNA binding ; serine-type endopeptidase activity ; DNA repair ; DNA replication ; negative regulation of DNA-templated transcription ; proteolysis ; SOS response


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Output: cytoplasm ; coproporphyrinogen oxidase activity ; metal ion binding ; protein homodimerization activity ; protoporphyrinogen IX biosynthetic process


Instruction: Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.

Output: cytoplasm ; EKC/KEOPS complex ; iron ion binding ; N(6)-L-threonylcarbamoyladenine synthase activity ; tRNA threonylcarbamoyladenosine modification


Instruction: Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.

Output: 8-amino-7-oxononanoate synthase activity ; pyridoxal phosphate binding ; biotin biosynthetic process


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; preQ1 synthase activity ; queuosine biosynthetic process


Instruction: Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.

Output: cytoplasm ; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity ; RNA binding


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: nucleus ; DNA-binding transcription factor activity, RNA polymerase II-specific ; metal ion binding ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; cell differentiation ; male meiosis I ; regulation of transcription by RNA polymerase II ; spermatogenesis


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Input: MNILIIFTSYLLGSLPTGFLIGKYLKNIDLRTIGSGSTGATNVLRNVGKWPALFVFIIDVGKGLIAVKIAQYYTDQGLIEVIAGISAISGHIWPIWLRGKGGKAVATGLGMFLALSWKVGLASLGIFLIVLTKTKFVSLSSISAAILLPIFMFFYLGKFIHSYFFISLIVALLVIWKHRTNIKRLIKGEESKINQNQ

Output: plasma membrane ; acyl-phosphate glycerol-3-phosphate acyltransferase activity ; phospholipid biosynthetic process


Instruction: Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.

Output: plasma membrane-derived thylakoid membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; ATP synthesis coupled electron transport ; photosynthesis, light reaction


Instruction: Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; aspartate-tRNA ligase activity ; ATP binding ; nucleic acid binding ; transferase activity ; aspartyl-tRNA aminoacylation


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Output: cytosol ; endosome ; membrane ; GTPase activating protein binding ; GTPase activator activity ; guanyl-nucleotide exchange factor activity ; endocytosis ; regulation of GTPase activity ; regulation of protein transport


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: homogentisate 1,2-dioxygenase activity ; iron ion binding ; L-phenylalanine catabolic process ; tyrosine catabolic process


Instruction: Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.

Output: uridylyltransferase activity ; phosphoric diester hydrolase activity ; nitrogen compound metabolic process ; regulation of nitrogen utilization


Instruction: Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.

Input: MIALLQRVSQARVEVGGRRVGEIGPGLLVLVCAEPSDTGAVADKLVERLLKLRVFSDDAGKMNRSVVEAGGGLLIVSQFTLAADCSGGNRPSFSGAAPAEQGRVLYERLLATARSRHTPVECGEFGADMQVLLVNDGPVTIPLVVGHDKLRP

Output: cytoplasm ; D-aminoacyl-tRNA deacylase activity ; Gly-tRNA(Ala) hydrolase activity ; Ser(Gly)-tRNA(Ala) hydrolase activity ; tRNA binding ; D-amino acid catabolic process


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: 3'-5'-RNA exonuclease activity ; phosphate-dependent exonuclease activity ; tRNA binding ; rRNA catabolic process ; rRNA processing ; tRNA processing


Instruction: Determine the Gene Ontology term that best describes the attributes of a given protein sequence.

Output: cytidine deaminase activity ; deoxycytidine deaminase activity ; zinc ion binding


Instruction: Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.

Output: cytoplasm ; peptidyl-prolyl cis-trans isomerase activity ; cell cycle ; cell division ; protein folding ; protein transport


Instruction: Provide the Gene Ontology term that matches the characteristics of a given protein sequence.

Output: cytoplasm ; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity ; RNA binding


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Output: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity ; ATP binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; phosphorylation ; terpenoid biosynthetic process


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: 3-isopropylmalate dehydratase activity ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; leucine biosynthetic process


Instruction: Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.

Output: cytoplasm ; L-lactate dehydrogenase activity ; glycolytic process


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: chloroplast ; DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; protein dimerization activity ; DNA-templated transcription


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: cytoplasm ; peptidyl-prolyl cis-trans isomerase activity ; cell cycle ; cell division ; protein folding ; protein transport


Instruction: Determine the Gene Ontology term that best describes the attributes of a given protein sequence.

Output: cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; methylthiotransferase activity ; tRNA modification


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Output: ketol-acid reductoisomerase activity ; magnesium ion binding ; NADP binding ; isoleucine biosynthetic process ; valine biosynthetic process


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; ATP binding ; serine-tRNA ligase activity ; selenocysteine biosynthetic process ; seryl-tRNA aminoacylation


Instruction: Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; protein-L-isoaspartate (D-aspartate) O-methyltransferase activity ; methylation ; protein modification process ; protein repair


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Input: MAAGSTGERPFFEIITSIRYWVIHAITLPSIFLAGFLFVSTGLAYDAFGTPRPDAYFQATESKAPVVSQRYEGKSQLDDRLQ

Output: photosystem II ; plasma membrane-derived thylakoid membrane ; electron transfer activity ; heme binding ; iron ion binding ; photosynthetic electron transport chain


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: magnesium ion binding ; phosphoglucosamine mutase activity ; carbohydrate metabolic process


Instruction: Determine the Gene Ontology term that best describes the attributes of a given protein sequence.

Output: cytoplasm ; ATP binding ; magnesium ion binding ; succinate-CoA ligase (ADP-forming) activity ; succinate-CoA ligase (GDP-forming) activity ; tricarboxylic acid cycle


Instruction: Provide the Gene Ontology term that matches the characteristics of a given protein sequence.

Output: cytoplasm ; triose-phosphate isomerase activity ; gluconeogenesis ; glycolytic process


Instruction: Predict the GO term based on the protein sequence.

Output: cytoplasm ; ATP binding ; ATP hydrolysis activity ; RNA binding ; RNA helicase activity ; translation initiation factor activity


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: 4 iron, 4 sulfur cluster binding ; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity ; iron ion binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process


Instruction: Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.

Output: plasma membrane ; UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity ; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity ; carbohydrate metabolic process ; cell cycle ; cell division ; cell wall organization ; lipid glycosylation ; peptidoglycan biosynthetic process ; regulation of cell shape


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: 8-amino-7-oxononanoate synthase activity ; pyridoxal phosphate binding ; biotin biosynthetic process


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: GTP binding ; magnesium ion binding ; uracil phosphoribosyltransferase activity ; UMP salvage ; uracil salvage


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: cytoplasm ; adenylate kinase activity ; ATP binding ; AMP salvage ; phosphorylation


Instruction: Predict the specific  Gene Ontology term that represents the characteristics of a given protein sequence.

Input: MIYYLIALFVIAIDQLSKWFIVKNMELGASIPIIDNVLYITSHRNRGAAWGILENKMWFFYIITVVFVGFIVFYMKKYAKTDKLLGISLGLILGGAIGNFIDRVFRQEVVDFIHVYIFSYNYPVFNIADSALCIGVVLIIIQTLLEGKKMKE

Output: plasma membrane ; aspartic-type endopeptidase activity ; proteolysis


Instruction: Predict the GO term based on the protein sequence.

Output: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity ; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity ; metal ion binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; 3-oxoacyl- synthase activity ; beta-ketoacyl-acyl-carrier-protein synthase III activity ; fatty acid biosynthetic process


Instruction: Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.

Output: cytoplasm ; 23S rRNA (guanine(2445)-N(2))-methyltransferase activity ; RNA binding ; rRNA (guanine-N7-)-methyltransferase activity


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: cytoplasm ; ATP binding ; galactokinase activity ; magnesium ion binding ; galactose metabolic process


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Input: MIILGIDEAGRGPLSGPVVAAGVILDQDKIIDGLADSKKLTEKKRQSLYQQIITHAKAYTIVEISPQQIDELNILQATLKAIHQVANNLERQFDKVLVDGNKLPNWDYNSEAIVKGDSKIIEISAASILAKVHRDNICLEHDRLYPQYGFAKHKGYPTKEHLENIKKYGVLDIHRKSYKPVQVLLNE

Output: cytoplasm ; manganese ion binding ; RNA binding ; RNA-DNA hybrid ribonuclease activity ; RNA catabolic process


Instruction: Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.

Output: cytoplasm ; excinuclease repair complex ; ATP binding ; ATP hydrolysis activity ; DNA binding ; excinuclease ABC activity ; helicase activity ; nucleotide-excision repair ; SOS response


Instruction: Predict the GO term based on the protein sequence.

Output: plasma membrane ; ABC-type vitamin B12 transporter activity ; ATP binding ; ATP hydrolysis activity


Instruction: Predict the GO term based on the protein sequence.

Output: 3-dehydro-L-gulonate-6-phosphate decarboxylase activity ; magnesium ion binding ; orotidine-5'-phosphate decarboxylase activity ; 'de novo' pyrimidine nucleobase biosynthetic process ; L-ascorbic acid catabolic process


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: cell surface ; extracellular region ; phosphopyruvate hydratase complex ; magnesium ion binding ; phosphopyruvate hydratase activity ; glycolytic process


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: acetate-CoA ligase activity ; AMP binding ; ATP binding ; metal ion binding ; acetyl-CoA biosynthetic process from acetate ; chemotaxis


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: methenyltetrahydrofolate cyclohydrolase activity ; methylenetetrahydrofolate dehydrogenase (NADP+) activity ; histidine biosynthetic process ; methionine biosynthetic process ; purine nucleotide biosynthetic process ; tetrahydrofolate interconversion


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Output: 2 iron, 2 sulfur cluster binding ; 4 iron, 4 sulfur cluster binding ; biotin synthase activity ; iron ion binding ; biotin biosynthetic process


Instruction: Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.

Output: cobalt ion binding ; succinyl-diaminopimelate desuccinylase activity ; zinc ion binding ; diaminopimelate biosynthetic process ; lysine biosynthetic process via diaminopimelate


Instruction: Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.

Output: cytoplasm ; ATP binding ; ATP hydrolysis activity ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: DNA binding ; serine-type endopeptidase activity ; DNA repair ; DNA replication ; negative regulation of DNA-templated transcription ; proteolysis ; SOS response


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: cytoplasm ; glycine hydroxymethyltransferase activity ; pyridoxal phosphate binding ; glycine biosynthetic process from serine ; tetrahydrofolate interconversion


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: cytoplasm ; ATP binding ; magnesium ion binding ; methionine adenosyltransferase activity ; one-carbon metabolic process ; S-adenosylmethionine biosynthetic process


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Input: MAASVRILGIDPGSRVTGFGVIDVRGRDHFYVASGCIKTPADAPLADRIAVIVRHIGEVVAVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLPVSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQADAADGLAVALTHALRNHGLASRLNPSGMQVKRGRFQ

Output: cytoplasm ; crossover junction DNA endonuclease activity ; DNA binding ; magnesium ion binding ; DNA recombination ; DNA repair


Instruction: Provide the Gene Ontology term that matches the characteristics of a given protein sequence.

Input: MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLREKDKHIEEVRKNKESKDPADETEAD

Output: cytoplasm ; microtubule ; regulation of microtubule polymerization or depolymerization


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Output: cytoplasm ; ATP binding ; magnesium ion binding ; shikimate kinase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process ; phosphorylation


Instruction: Predict the GO term based on the protein sequence.

Output: cytoplasm ; rRNA (uridine-2'-O-)-methyltransferase activity


Instruction: Predict the GO term based on the protein sequence.

Output: 4 iron, 4 sulfur cluster binding ; cyclase activity ; iron ion binding ; oxidoreductase activity ; S-adenosyl-L-methionine binding ; pyrroloquinoline quinone biosynthetic process


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; imidazoleglycerol-phosphate synthase activity ; lyase activity ; histidine biosynthetic process


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: cytoplasm ; 4-hydroxy-tetrahydrodipicolinate reductase ; NAD binding ; NADP binding ; oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor ; diaminopimelate biosynthetic process ; lysine biosynthetic process via diaminopimelate


Instruction: Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.

Output: cytoplasm ; ATP binding ; ATP hydrolysis activity ; RNA binding ; RNA helicase activity ; RNA catabolic process


Instruction: Predict the GO term based on the protein sequence.

Output: cytoplasm ; aspartate-tRNA ligase activity ; ATP binding ; nucleic acid binding ; transferase activity ; aspartyl-tRNA aminoacylation


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: ketol-acid reductoisomerase activity ; magnesium ion binding ; NADP binding ; isoleucine biosynthetic process ; valine biosynthetic process


Instruction: Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.

Output: NADH dehydrogenase complex ; plasma membrane ; NAD binding ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; respiratory electron transport chain


Instruction: Predict the GO term based on the protein sequence.

Input: AAFALPAFASFEKDVITPAALEAVLNRKAPLYNIMMENDAILNVIANVKTVISNPVLEEALLKTNHGVNGIPCGESCVWIPCLTSAVGCSCKSKVCYRNSLDN

Output: defense response


Instruction: Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.

Output: L-rhamnonate dehydratase activity ; magnesium ion binding ; amino acid catabolic process


Instruction: Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.

Output: plasma membrane ; phosphatidylserine decarboxylase activity ; phosphatidylethanolamine biosynthetic process


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: 1-deoxy-D-xylulose-5-phosphate synthase activity ; magnesium ion binding ; thiamine pyrophosphate binding ; 1-deoxy-D-xylulose 5-phosphate biosynthetic process ; terpenoid biosynthetic process ; thiamine biosynthetic process


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: 4 iron, 4 sulfur cluster binding ; carbon-carbon lyase activity ; zinc ion binding ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; ATP binding ; serine-tRNA ligase activity ; selenocysteine biosynthetic process ; seryl-tRNA aminoacylation


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; ATP binding ; glutamate 5-kinase activity ; RNA binding ; L-proline biosynthetic process ; phosphorylation


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: plasma membrane ; undecaprenyl-diphosphatase activity ; cell wall organization ; dephosphorylation ; peptidoglycan biosynthetic process ; regulation of cell shape ; response to antibiotic


Instruction: Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.

Output: ketol-acid reductoisomerase activity ; magnesium ion binding ; isoleucine biosynthetic process ; valine biosynthetic process


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Output: 4 iron, 4 sulfur cluster binding ; ATP binding ; metal ion binding ; oxidoreductase activity, acting on iron-sulfur proteins as donors ; oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor ; light-independent bacteriochlorophyll biosynthetic process ; photosynthesis, dark reaction


Instruction: Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.

Output: cytoplasm ; nucleus ; nuclear protein quality control by the ubiquitin-proteasome system ; proteasome localization ; protein transport


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Input: MRAVVQRSLEAKVTIEGNTVGTIDHGFVVLLGVGPTDTEAESDYLAEKISKLRVFSDPVGKMNLALADVGGQVLSISQFTLYADTHRGNRPSFTGAADPALGDRLYQAFNAKLKALGVPVATGEFGGDMQVSLTNDGPVTILFDTEAK

Output: cytoplasm ; D-aminoacyl-tRNA deacylase activity ; Gly-tRNA(Ala) hydrolase activity ; Ser(Gly)-tRNA(Ala) hydrolase activity ; tRNA binding ; D-amino acid catabolic process


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: eukaryotic 43S preinitiation complex ; eukaryotic 48S preinitiation complex ; eukaryotic translation initiation factor 3 complex ; RNA binding ; translation initiation factor activity ; translation initiation factor binding ; formation of cytoplasmic translation initiation complex


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: nucleus ; 4 iron, 4 sulfur cluster binding ; ATP binding ; ATP hydrolysis activity ; chromatin binding ; DNA binding ; DNA helicase activity ; metal ion binding ; DNA recombination ; DNA repair ; DNA replication ; male germ-line stem cell population maintenance ; regulation of double-strand break repair via homologous recombination ; telomere maintenance


Instruction: Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.

Output: cytoplasm ; 3-phosphoshikimate 1-carboxyvinyltransferase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Output: plasma membrane ; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity ; metal ion binding ; ubiquinone biosynthetic process


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: cytoplasm ; nucleoid ; ATP binding ; DNA binding ; cell division ; chromosome condensation ; chromosome segregation ; DNA replication


Instruction: Predict the specific  Gene Ontology term that represents the characteristics of a given protein sequence.

Output: cytoplasm ; ATP binding ; heat shock protein binding ; unfolded protein binding ; zinc ion binding ; DNA replication ; protein folding ; response to heat


Instruction: Determine the GO term that accurately describes the attributes of a given protein sequence.

Output: periplasmic space ; calcium ion binding ; heme binding ; iron ion binding ; nitrite reductase (cytochrome, ammonia-forming) activity ; anaerobic respiration ; nitrate assimilation


Instruction: Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.

Output: NADH dehydrogenase complex ; plasma membrane ; NAD binding ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; respiratory electron transport chain


Instruction: Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.

Output: cytoplasm ; ATP binding ; ATP phosphoribosyltransferase activity ; magnesium ion binding ; histidine biosynthetic process


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Output: acetyl-CoA carboxylase complex ; acetyl-CoA carboxylase activity ; ATP binding ; carboxyl- or carbamoyltransferase activity ; zinc ion binding ; fatty acid biosynthetic process ; malonyl-CoA biosynthetic process


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: plasma membrane ; antiporter activity ; voltage-gated chloride channel activity


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Input: MKQLFLIIGAPGSGKTTDAELIAKNNSETIAHFSTGDLLRAESAKKTERGLLIEKFTSQGELVPLEIVVETILSAIKSSSKGIILIDGYPRSVEQMQALDKELNAQNEVVLKSVIEVKVSENTAKERVLGRSRGADDNERVFHNRMRVFLDPLAEIQNFYKNKNVYKAINGERSIEEIVNEMQKYILSFAN

Output: cytoplasm ; adenylate kinase activity ; ATP binding ; AMP salvage ; phosphorylation


Instruction: Determine the Gene Ontology term that best describes the attributes of a given protein sequence.

Output: plasma membrane ; phosphatidylserine decarboxylase activity ; phosphatidylethanolamine biosynthetic process


Instruction: Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.

Output: cytoplasm ; iron ion binding ; N(6)-L-threonylcarbamoyladenine synthase activity ; tRNA threonylcarbamoyladenosine modification


Instruction: Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.

Output: 3-isopropylmalate dehydratase activity ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; leucine biosynthetic process


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: periplasmic space ; metal ion binding ; molybdopterin cofactor binding ; oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor ; protein repair


Instruction: Predict the specific  Gene Ontology term that represents the characteristics of a given protein sequence.

Output: ATP binding ; GMP synthase activity ; glutamine metabolic process


Instruction: Predict the GO term based on the protein sequence.

Output: cytoplasm ;  kinase activity ; ATP binding ; phosphoprotein phosphatase activity ; protein serine/threonine kinase activity ; glucose metabolic process ; glyoxylate cycle ; phosphorylation ; tricarboxylic acid cycle


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: ATP binding ; kinase activity ; phosphotransferase activity, alcohol group as acceptor ; 1,6-anhydro-N-acetyl-beta-muramic acid catabolic process ; amino sugar metabolic process ; carbohydrate metabolic process ; peptidoglycan turnover ; phosphorylation


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: ATP binding ; DNA binding ; DNA-binding transcription factor activity ; carbohydrate metabolic process ; positive regulation of carbohydrate metabolic process ; positive regulation of DNA-templated transcription


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: ATP binding ; GMP synthase activity ; glutamine metabolic process


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Input: MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALCEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPSMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGLAS

Output: cytoplasm ; manganese ion binding ; RNA binding ; RNA-DNA hybrid ribonuclease activity ; RNA catabolic process


Instruction: Determine the Gene Ontology term that best describes the attributes of a given protein sequence.

Output: metal ion binding ; UDP-3-O- N-acetylglucosamine deacetylase activity ; UDP-3-O-acyl-N-acetylglucosamine deacetylase activity ; lipid A biosynthetic process


Instruction: Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.

Output: magnesium ion binding ; manganese ion binding ; NAD+ diphosphatase activity ; NADH pyrophosphatase activity ; RNA NAD-cap (NMN-forming) hydrolase activity ; zinc ion binding


Instruction: Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.

Output: cytoplasm ; O-phospho-L-serine:2-oxoglutarate aminotransferase activity ; pyridoxal phosphate binding ; L-serine biosynthetic process ; pyridoxine biosynthetic process


Instruction: Predict the specific  Gene Ontology term that represents the characteristics of a given protein sequence.

Output: cytoplasm ; metal ion binding ; rhamnulose-1-phosphate aldolase activity ; rhamnose catabolic process


Instruction: Predict the specific  Gene Ontology term that represents the characteristics of a given protein sequence.

Output: 4 iron, 4 sulfur cluster binding ; ATP binding ; metal ion binding ; oxidoreductase activity, acting on iron-sulfur proteins as donors ; oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor ; light-independent bacteriochlorophyll biosynthetic process ; photosynthesis, dark reaction


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; ATP binding ; heat shock protein binding ; unfolded protein binding ; zinc ion binding ; DNA replication ; protein folding ; response to heat


Instruction: For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.

Output: NADP binding ; shikimate 3-dehydrogenase (NADP+) activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process ; shikimate metabolic process


Instruction: Predict the GO term based on the protein sequence.

Input: GLWSKIKETGKEAAKAAGKAALDKIAEAV

Output: extracellular region ; defense response


Instruction: Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.

Output: plasma membrane ; phosphotransferase activity, for other substituted phosphate groups ; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase activity ; 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process ; lipid A biosynthetic process ; lipopolysaccharide biosynthetic process ; response to antibiotic


Instruction: The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.

Output: orotidine-5'-phosphate decarboxylase activity ; 'de novo' pyrimidine nucleobase biosynthetic process ; 'de novo' UMP biosynthetic process


Instruction: The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.

Output: plasma membrane ; undecaprenyl-diphosphatase activity ; cell wall organization ; dephosphorylation ; peptidoglycan biosynthetic process ; regulation of cell shape ; response to antibiotic


Instruction: Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.

Output: heme binding ; metal ion binding ; peroxidase activity ; heme biosynthetic process


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: DNA-directed RNA polymerase complex ; exosome (RNase complex) ; primosome complex ; DNA primase activity ; metal ion binding ; poly(A) binding


Instruction: Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.

Output: cytoplasm ; ATP binding ; magnesium ion binding ; phosphoribosylformylglycinamidine synthase activity ; 'de novo' IMP biosynthetic process


Instruction: Predict the GO term based on the protein sequence.

Output: molybdopterin synthase complex ; 4 iron, 4 sulfur cluster binding ; GTP 3',8'-cyclase activity ; GTP binding ; metal ion binding ; S-adenosyl-L-methionine binding ; Mo-molybdopterin cofactor biosynthetic process


Instruction: Find the Gene Ontology term that matches the attributes of a given protein sequence.

Output: plasma membrane ; NAD binding ; NADH dehydrogenase (ubiquinone) activity ; quinone binding