Datasets:
Upload marker_pdf_conversion.ipynb
Browse files- marker_pdf_conversion.ipynb +315 -0
marker_pdf_conversion.ipynb
ADDED
@@ -0,0 +1,315 @@
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{
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"cells": [
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{
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"cell_type": "markdown",
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"source": [
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"# marker pdf conversion\n",
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"\n",
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"\n",
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"- https://github.com/VikParuchuri/marker/tree/master\n",
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"\n",
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"\n",
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"---"
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],
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"metadata": {
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"id": "PzogeOQ6rbvL"
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}
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {
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"id": "lIYdn1woOS1n"
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},
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"outputs": [],
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"source": [
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"!git clone https://github.com/VikParuchuri/marker.git\n",
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"%cd marker"
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]
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},
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{
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"cell_type": "code",
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"source": [
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"!pip install -U -q pip ninja poetry"
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],
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"metadata": {
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"id": "YkbBuXMudX5g"
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},
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"execution_count": null,
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"outputs": []
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},
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{
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"cell_type": "code",
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"source": [
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"%%bash\n",
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"set -e\n",
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46 |
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"sudo apt-get update\n",
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47 |
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"sudo apt-get install -y software-properties-common\n",
|
48 |
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"sudo apt-get install -y build-essential python3 python3-pip git\n",
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49 |
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"sudo apt-get install -y python3-dev libssl-dev libc6-dev && sudo apt install zip unzip tmux nano p7zip-full git -y\n",
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"clear\n",
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"echo \"done\""
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],
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"metadata": {
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"id": "JzW38yGYhH3W"
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},
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"execution_count": null,
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"outputs": []
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},
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{
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"cell_type": "code",
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"source": [
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"# %%bash\n",
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63 |
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"!sudo apt update && sudo apt upgrade -y > /dev/null\n",
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64 |
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"!bash scripts/install/tesseract_5_install.sh\n",
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"# !bash scripts/install/ghostscript_install.sh && clear\n",
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66 |
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"!sudo apt install ghostscript && clear\n",
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"!cat scripts/install/apt-requirements.txt | xargs sudo apt install -y --allow-unauthenticated > LOG_installs_apt.log"
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],
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"metadata": {
|
70 |
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"id": "cDcjkP3hd_Kh"
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},
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"execution_count": null,
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"outputs": []
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},
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{
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"cell_type": "code",
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"source": [
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"%%writefile convert_pdf_dir.sh\n",
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"#@title convert_pdf_dir.sh\n",
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"#!/bin/bash\n",
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"\n",
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"# Default source directory is the current directory if not specified\n",
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"SOURCE_DIR=${1:-$(pwd)}\n",
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"# Default target directory is parent of source directory + marker-pdf2text\n",
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"TARGET_DIR=${2:-$(dirname \"$(realpath $SOURCE_DIR)\")/marker-pdf2text}\n",
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"\n",
|
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"# Function to convert a single PDF file\n",
|
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"convert_pdf() {\n",
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" local source_pdf=$1\n",
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90 |
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" local target_md=$2\n",
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" mkdir -p \"$(dirname \"$target_md\")\" # Ensure the target directory exists\n",
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92 |
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" poetry run python convert_single.py \"$source_pdf\" \"$target_md\"\n",
|
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"}\n",
|
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"\n",
|
95 |
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"export -f convert_pdf\n",
|
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"\n",
|
97 |
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"# Find all PDF files and convert them\n",
|
98 |
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"find \"$SOURCE_DIR\" -type f -name '*.pdf' -exec bash -c 'convert_pdf \"$0\" \"${1/pdf/md}\"' {} \"$TARGET_DIR/$(realpath --relative-to=\"$SOURCE_DIR\" \"{}\")\" \\;\n",
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"\n",
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"echo \"Conversion complete. All markdown files have been saved to $TARGET_DIR.\""
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],
|
102 |
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"metadata": {
|
103 |
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"cellView": "form",
|
104 |
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"id": "aRi6CBR_ekIw"
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105 |
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},
|
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"execution_count": null,
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"outputs": []
|
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},
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{
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+
"cell_type": "code",
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"source": [
|
112 |
+
"!find / -name tessdata\n",
|
113 |
+
"!echo \"TESSDATA_PREFIX=/usr/share/tesseract-ocr/5/tessdata\" > local.env\n",
|
114 |
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"!sudo rm *.lock\n",
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115 |
+
"!poetry install -q"
|
116 |
+
],
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117 |
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"metadata": {
|
118 |
+
"id": "TlQ6wV_Lfawh",
|
119 |
+
"colab": {
|
120 |
+
"base_uri": "https://localhost:8080/"
|
121 |
+
},
|
122 |
+
"outputId": "299eca48-79ba-41a3-95c1-7b5ffc657b14"
|
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+
},
|
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+
"execution_count": null,
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"outputs": [
|
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{
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"output_type": "stream",
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"name": "stdout",
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"text": [
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"\u001b[1A\u001b[0J \u001b[34;1m-\u001b[39;22m \u001b[39mInstalling \u001b[39m\u001b[36mtorch\u001b[39m\u001b[39m (\u001b[39m\u001b[39;1m2.3.0\u001b[39;22m\u001b[39m)\u001b[39m: \u001b[34mInstalling...\u001b[39m\n",
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"\u001b[1A\u001b[0J \u001b[32;1m-\u001b[39;22m \u001b[39mInstalling \u001b[39m\u001b[36mtorch\u001b[39m\u001b[39m (\u001b[39m\u001b[32m2.3.0\u001b[39m\u001b[39m)\u001b[39m\n",
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"\n",
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133 |
+
"\u001b[34mWriting lock file\u001b[39m\n",
|
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"\n",
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135 |
+
"\u001b[39;1mInstalling\u001b[39;22m the current project: \u001b[36mmarker-pdf\u001b[39m (\u001b[39;1m0.1.3\u001b[39;22m)\u001b[1G\u001b[2K\u001b[39;1mInstalling\u001b[39;22m the current project: \u001b[36mmarker-pdf\u001b[39m (\u001b[32m0.1.3\u001b[39m)\n"
|
136 |
+
]
|
137 |
+
}
|
138 |
+
]
|
139 |
+
},
|
140 |
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{
|
141 |
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"cell_type": "markdown",
|
142 |
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"source": [
|
143 |
+
"---"
|
144 |
+
],
|
145 |
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"metadata": {
|
146 |
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"id": "jNOFjXVJSz2L"
|
147 |
+
}
|
148 |
+
},
|
149 |
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{
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150 |
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"cell_type": "markdown",
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151 |
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"source": [
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152 |
+
"## from dropbox\n"
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153 |
+
],
|
154 |
+
"metadata": {
|
155 |
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"id": "yn0qVN93V0v6"
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156 |
+
}
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157 |
+
},
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{
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159 |
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"cell_type": "code",
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"source": [
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"URL = \"https://www.dropbox.com/scl/fo/kbbliz7or5ptwc1c7vgb9/AF0b76tmbY3BuxHDnMzNO1E?rlkey=x5q3r7o9wdob85xjazjanloe3&dl=1\" # @param {type:\"string\"}\n",
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162 |
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"!wget -q -O data.zip $URL\n",
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163 |
+
"!unzip data.zip -d /content/pdf-textbooks\n",
|
164 |
+
"!rm data.zip && clear"
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165 |
+
],
|
166 |
+
"metadata": {
|
167 |
+
"id": "YwnblF4_iZuu"
|
168 |
+
},
|
169 |
+
"execution_count": null,
|
170 |
+
"outputs": []
|
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+
},
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{
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"cell_type": "code",
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"source": [
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175 |
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"# !bash convert_pdf_dir.sh /content/pdf-textbooks"
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176 |
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],
|
177 |
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"metadata": {
|
178 |
+
"id": "MmkB5ix-imgH"
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179 |
+
},
|
180 |
+
"execution_count": null,
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"outputs": []
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},
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183 |
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{
|
184 |
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"cell_type": "code",
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185 |
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"source": [
|
186 |
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"!DEFAULT_LANG=\"en\" TORCH_DEVICE=cuda poetry run python convert.py\\\n",
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187 |
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" /content/pdf-textbooks/python-book \\\n",
|
188 |
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" /content/marker-md2text/python-book \\\n",
|
189 |
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" --workers 6 --min_length 100"
|
190 |
+
],
|
191 |
+
"metadata": {
|
192 |
+
"id": "GWZURJALmDtV"
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},
|
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+
"execution_count": null,
|
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"outputs": []
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},
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{
|
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"cell_type": "code",
|
199 |
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"source": [
|
200 |
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"out_file=\"/content/archived-all-marker.7z\"\n",
|
201 |
+
"!find /content/marker-md2text -type f -name \"*.json\" -print -delete # fuck off\n",
|
202 |
+
"!7z a $out_file /content/marker-md2text"
|
203 |
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],
|
204 |
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"metadata": {
|
205 |
+
"id": "c5xndco3mJdq"
|
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},
|
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+
"execution_count": null,
|
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"outputs": []
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},
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{
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"cell_type": "markdown",
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"source": [
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213 |
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"## napierone"
|
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],
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215 |
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"metadata": {
|
216 |
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"id": "qybBz9Oqp2pH"
|
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}
|
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},
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{
|
220 |
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"cell_type": "code",
|
221 |
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"source": [
|
222 |
+
"target_dir = '/content/napierone-epub'\n",
|
223 |
+
"!wget -q http://napierone.com.s3-eu-north-1.amazonaws.com/NapierOne/Data/EPUB/EPUB-total.zip\n",
|
224 |
+
"!unzip -o -q EPUB-total.zip -d $target_dir\n",
|
225 |
+
"!ls $target_dir | wc -l\n",
|
226 |
+
"!rm *.zip"
|
227 |
+
],
|
228 |
+
"metadata": {
|
229 |
+
"id": "jhB5lOA6n8f5"
|
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},
|
231 |
+
"execution_count": null,
|
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"outputs": []
|
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+
},
|
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{
|
235 |
+
"cell_type": "code",
|
236 |
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"source": [
|
237 |
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"!DEFAULT_LANG=\"en\" TORCH_DEVICE=cuda poetry run python convert.py\\\n",
|
238 |
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" $target_dir \\\n",
|
239 |
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" /content/marker-napierone-file2text/EPUB \\\n",
|
240 |
+
" --workers 6 --min_length 300"
|
241 |
+
],
|
242 |
+
"metadata": {
|
243 |
+
"colab": {
|
244 |
+
"base_uri": "https://localhost:8080/"
|
245 |
+
},
|
246 |
+
"id": "Poi65wYSpryu",
|
247 |
+
"outputId": "8a20c15e-ae37-4be3-85e8-be3dea88afb8"
|
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+
},
|
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"execution_count": null,
|
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"outputs": [
|
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{
|
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"metadata": {
|
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"tags": null
|
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},
|
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"name": "stdout",
|
256 |
+
"output_type": "stream",
|
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"text": [
|
258 |
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"2024-05-08 22:37:05,427\tINFO worker.py:1749 -- Started a local Ray instance.\n",
|
259 |
+
"Loaded texify model to cuda with torch.float16 dtype\n",
|
260 |
+
"Converting 5000 pdfs in chunk 1/1 with 6 processes, and storing in /content/marker-napierone-file2text/EPUB\n",
|
261 |
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"100% 4999/5000 [14:01:52<00:08, 8.66s/it]"
|
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]
|
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}
|
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]
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},
|
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{
|
267 |
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"cell_type": "code",
|
268 |
+
"source": [
|
269 |
+
"out_file=\"/content/archived-marker-napierone-epub.7z\"\n",
|
270 |
+
"!find /content/marker-napierone-file2text -type f -name \"*.json\" -print -delete # fuck off\n",
|
271 |
+
"!7z a $out_file /content/marker-napierone-file2text"
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+
],
|
273 |
+
"metadata": {
|
274 |
+
"id": "sU8QpnNStjFn"
|
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+
},
|
276 |
+
"execution_count": null,
|
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+
"outputs": []
|
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},
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{
|
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"cell_type": "code",
|
281 |
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"source": [
|
282 |
+
"from google.colab import files\n",
|
283 |
+
"files.download(out_file)"
|
284 |
+
],
|
285 |
+
"metadata": {
|
286 |
+
"id": "iyzMPMmtqAzI"
|
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+
},
|
288 |
+
"execution_count": null,
|
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+
"outputs": []
|
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+
},
|
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