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AVIDa-SARS-CoV-2 is a dataset featuring the antigen-variable domain of heavy chain of heavy chain antibody (VHH) interactions obtained from two alpacas immunized with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike proteins.
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AVIDa-SARS-CoV-2 includes binary labels indicating the binding or non-binding of diverse VHH sequences to 12 SARS-CoV-2 mutants, such as the Delta and Omicron variants.
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Further details on AVIDa-SARS-CoV-2 are described in our paper "A SARS-CoV-2 Interaction Dataset and VHH Sequence Corpus for Antibody Language Models.”
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## Columns
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- Project Page: https://avida-sars-cov-2.cognanous.com
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- Code: https://github.com/cognano/AVIDa-SARS-CoV-2
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- Paper:
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## Citation
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If you use AVIDa-SARS-CoV-2 in your research, please cite the following paper.
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```bibtex
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```
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AVIDa-SARS-CoV-2 is a dataset featuring the antigen-variable domain of heavy chain of heavy chain antibody (VHH) interactions obtained from two alpacas immunized with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike proteins.
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AVIDa-SARS-CoV-2 includes binary labels indicating the binding or non-binding of diverse VHH sequences to 12 SARS-CoV-2 mutants, such as the Delta and Omicron variants.
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Further details on AVIDa-SARS-CoV-2 are described in our paper "[A SARS-CoV-2 Interaction Dataset and VHH Sequence Corpus for Antibody Language Models](https://arxiv.org/abs/2405.18749).”
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## Columns
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- Project Page: https://avida-sars-cov-2.cognanous.com
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- Code: https://github.com/cognano/AVIDa-SARS-CoV-2
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- Paper: https://arxiv.org/abs/2405.18749
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## Citation
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If you use AVIDa-SARS-CoV-2 in your research, please cite the following paper.
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```bibtex
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@article{tsuruta2024sars,
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title={A {SARS}-{C}o{V}-2 Interaction Dataset and {VHH} Sequence Corpus for Antibody Language Models},
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author={Hirofumi Tsuruta and Hiroyuki Yamazaki and Ryota Maeda and Ryotaro Tamura and Akihiro Imura},
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journal={arXiv preprint arXiv:2405.18749},
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year={2024}
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}
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```
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