Datasets:

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9 values
2
0
Biomarker
C0043459
Zellweger Syndrome
disease
H-02
5194
PEX13
PEX13
CTD_human
10,332,040
We now have evidence that the complete human cDNA encoding Pex13p, an SH3 protein of a docking factor for the peroxisome targeting signal 1 receptor (Pex5p), rescues peroxisomal matrix protein import and its assembly in fibroblasts from PBD patients of complementation group H. In addition, we detected mutations on the human PEX13 cDNA in two patients of group H. A severe phenotype of a ZS patient (H-02) was homozygous for a nonsense mutation, W234ter, which results in the loss of not only the SH3 domain but also the putative transmembrane domain of Pex13p.
0.400549
We now have evidence that the complete human cDNA encoding Pex13p, an SH3 protein of a docking factor for the peroxisome targeting signal 1 receptor (Pex5p), rescues peroxisomal matrix protein import and its assembly in fibroblasts from PBD patients of complementation group H. In addition, we detected mutations on the human <span class="gene" id="10332040-3-326-331">PEX13</span> cDNA in two patients of group H. A severe phenotype of a <span class="disease" id="10332040-3-389-391">ZS</span> patient (<span class="disease" id="10332040-3-401-405">H-02</span>) was homozygous for a nonsense mutation, W234ter, which results in the loss of not only the SH3 domain but also the putative transmembrane domain of Pex13p.
CTD_human;ORPHANET
1
0
Biomarker
C0010346
Crohn Disease
disease
Crohn's disease
3593
IL12B
IL12B
CTD_human
18,438,406
We also show that several risk loci are common to ulcerative colitis and Crohn's disease (IL23R, IL12B, HLA, NKX2-3 and MST1), whereas autophagy genes ATG16L1 and IRGM, along with NOD2 (also known as CARD15), are specific for Crohn's disease.
0.219113
We also show that several risk loci are common to ulcerative colitis and <span class="disease" id="18438406-2-73-88">Crohn's disease</span> (IL23R, <span class="gene" id="18438406-2-97-102">IL12B</span>, HLA, NKX2-3 and MST1), whereas autophagy genes ATG16L1 and IRGM, along with NOD2 (also known as CARD15), are specific for <span class="disease" id="18438406-2-226-241">Crohn's disease</span>.
CTD_human
null
null
Negative
MESH:D000012
null
null
ABL
6714
null
SRC
null
28,021,072
UNASSIGNED: 10006 Background: Dasatinib is an oral tyrosine kinase inhibitor of KIT, PDGFR, ABL and SRC with a distinct binding affinity for KIT and PDGFR.
null
null
null
null
null
Negative
MESH:D009336
null
null
tumor necrosis factor a
171293
null
cathepsin D
null
28,061,403
It also significantly restored hippocampal level of reactive oxygen species (ROS), glutathione (GSH), nuclear factor (erythroid-derived 2)-like 2 (Nrf2), activity of catalase and caspase 3, nuclear factor-<kappa>B (NF-kB), toll-like receptor 4 (TLR4), tumor necrosis factor a (TNFa), interleukin-1b (IL-1b), neural cell adhesion molecule (NCAM), glial fibrillary acidic protein (GFAP), cathepsin D, and heme oxygenase 1 (HO-1).
null
null
null
null
null
Negative
MESH:D002545
null
null
cerebral ischemia
81687
null
MMP-9
null
28,059,805
Finally, the induction of MMP-2 and MMP-9 by cerebral ischemia was partially blocked by crocin in aged rats.
null
null
null
1
0
Biomarker
C0079744
Diffuse Large B-Cell Lymphoma
disease
diffuse large cell lymphoma
567
B2M
beta 2 microglobulin
CTD_human
7,688,627
Value of serum beta 2 microglobulin as an indicator of early relapse in diffuse large cell lymphoma.
0.200549
Value of serum <span class="gene" id="7688627-0-15-35">beta 2 microglobulin</span> as an indicator of early relapse in <span class="disease" id="7688627-0-72-99">diffuse large cell lymphoma</span>.
CTD_human
1
0
Biomarker
C2239176
Liver carcinoma
disease
Hepatocellular Carcinoma
7099
TLR4
Toll-like Receptor 4
CTD_human
27,022,031
Toll-like Receptor 4 on Macrophage Promotes the Development of Steatohepatitis-related Hepatocellular Carcinoma in Mice.
0.203022
<span class="gene" id="27022031-0-0-20">Toll-like Receptor 4</span> on Macrophage Promotes the Development of Steatohepatitis-related <span class="disease" id="27022031-0-87-111">Hepatocellular Carcinoma</span> in Mice.
CTD_human
1
0
Biomarker
C0020538
Hypertensive disease
group
hypertension
5728
PTEN
PTEN
CTD_human
15,646,324
The findings indicated that the expression of PTEN is reduced in hypertensive aorta, that the reduced PTEN experession can be reversed by captopril treatment, that AngII and the increased mechanical strain may participate in regulating expression of PTEN, and that PTEN may play a role in the arterial remodeling induced by hypertension.
0.2
The findings indicated that the expression of <span class="gene" id="15646324-9-46-50">PTEN</span> is reduced in hypertensive aorta, that the reduced <span class="gene" id="15646324-9-102-106">PTEN</span> experession can be reversed by captopril treatment, that AngII and the increased mechanical strain may participate in regulating expression of <span class="gene" id="15646324-9-250-254">PTEN</span>, and that <span class="gene" id="15646324-9-265-269">PTEN</span> may play a role in the arterial remodeling induced by <span class="disease" id="15646324-9-324-336">hypertension</span>.
CTD_human
null
null
Negative
MESH:D010300
null
null
Familial forms of Parkinson's disease
31607
null
PINK1
null
28,011,627
Familial forms of Parkinson's disease (PD) caused by mutations in PINK1 are linked to mitochondrial impairment.
null
null
null
1
0
Biomarker
C0001430
Adenoma
group
adenoma
7296
TXNRD1
TXNRD1
CTD_human
18,483,336
Consistent with the individual SNP results, we observed a significant overall association with adenoma risk for SEPP1 and TXNRD1 (global P = 0.02 and 0.008, respectively) but not for the four GPX genes.
0.205415
Consistent with the individual SNP results, we observed a significant overall association with <span class="disease" id="18483336-10-95-102">adenoma</span> risk for SEPP1 and <span class="gene" id="18483336-10-122-128">TXNRD1</span> (global P = 0.02 and 0.008, respectively) but not for the four GPX genes.
CTD_human
1
0
Biomarker
C0020615
Hypoglycemia
disease
hypoglycaemia
6927
HNF1A
MODY3
CTD_human
15,787,664
Diabetic subjects with mutations in the gene encoding hepatocyte nuclear factor (HNF)-1alpha (MODY3) are prone to develop hypoglycaemia at low doses of glibenclamide, interpreted as sulphonylurea hypersensitivity.
0.201648
Diabetic subjects with mutations in the gene encoding hepatocyte nuclear factor (HNF)-1alpha (<span class="gene" id="15787664-1-94-99">MODY3</span>) are prone to develop <span class="disease" id="15787664-1-122-135">hypoglycaemia</span> at low doses of glibenclamide, interpreted as sulphonylurea hypersensitivity.
CTD_human
4
0
Biomarker
C0009375
Colonic Neoplasms
group
colon tumor
595
CCND1
cyclin D1
CTD_human
21,081,470
Western blots revealed overexpression of ?-catenin, c-Myc, cyclin D1, inducible nitric oxide synthase and cyclooxygenase-2 in colon tumor samples.
0.201648
Western blots revealed overexpression of &beta;-catenin, c-Myc, <span class="gene" id="21081470-8-59-68">cyclin D1</span>, inducible nitric oxide synthase and cyclooxygenase-2 in <span class="disease" id="21081470-8-126-137">colon tumor</span> samples.
CTD_human
null
null
Negative
MESH:D009369
null
null
tumour
22060
null
p53
null
28,066,899
These phenotypes coincided with an increased apoptosis and preferential up-regulation of p53 tumour suppressor protein in CD8+ T cells.
null
null
null
null
null
Negative
MESH:D018205
null
null
AT
16163
null
IL-13
null
28,193,830
We show that exposure of AT to Th2 cytokines, such as IL-4, IL-13, and GM-CSF, stimulates ATM proliferation, whereas Th1 cytokines, such as TNF-a, inhibit local ATM proliferation.
null
null
null
null
null
Negative
MESH:D001404
null
null
Babesia
101091522
null
paraoxonase-1
null
28,160,310
OBJECTIVES: The purpose of the study was to investigate the concentrations of serum amyloid A (SAA), haptoglobin (Hp), and paraoxonase-1 (PON1) in cats naturally infected with Hepatozoon felis and Babesia vogeli.
null
null
null
null
null
Negative
MESH:D000544
null
null
Alzheimer's disease
4225
null
meprin b
null
28,105,004
The latter event was discussed to be rather neuroprotective, whereas the ectodomain shedding of APP by meprin b reminiscent to BACE-1 is in line with the amyloid hypothesis of Alzheimer's disease, promoting neurodegeneration.
null
null
null
null
null
Negative
MESH:D003876
null
null
AD lesions
77125
null
IL-33
null
28,063,040
Moreover, the expression of alarmins such as TSLP, IL-33, and IL-25 is upregulated in acute AD lesions.
null
null
null
22
114
Biomarker
C0271829
Pendred's syndrome
disease
PDS
5172
SLC26A4
pendrin
CTD_human
10,644,529
The gene causing Pendred syndrome (PDS) encodes a protein designated pendrin, which is expressed in the thyroid, kidney, and fetal cochlea.
0.721287
The gene causing <span class="disease" id="10644529-2-17-33">Pendred syndrome</span> (<span class="disease" id="10644529-2-35-38">PDS</span>) encodes a protein designated <span class="gene" id="10644529-2-69-76">pendrin</span>, which is expressed in the thyroid, kidney, and fetal cochlea.
CTD_human;ORPHANET;UNIPROT
35
0
Therapeutic
C0027051
Myocardial Infarction
disease
myocardial infarction
5327
PLAT
alteplase
CTD_human
19,341,228
The patients with myocardial infarction after administration of alteplase had statistically significantly higher coronary flow (TIMI-3), 72.5% as compared to the patients who received streptokinase, 39.2%.
0.213027
The patients with <span class="disease" id="19341228-6-18-39">myocardial infarction</span> after administration of <span class="gene" id="19341228-6-64-73">alteplase</span> had statistically significantly higher coronary flow (TIMI-3), 72.5% as compared to the patients who received streptokinase, 39.2%.
CTD_human
null
null
Negative
MESH:D009369
null
null
malignancies
22060
null
p53
null
28,155,209
Because p53 function is depressed in most malignancies, if MSCs in malignancy also have p53 hypofunction, differentiation therapy to osteogenic or adipogenic lineage may be an effective treatment.
null
null
null
3
0
Biomarker
C0003873
Rheumatoid Arthritis
disease
rheumatoid arthritis
639
PRDM1
PRDM1
CTD_human
19,898,481
Genetic variants at CD28, PRDM1 and CD2/CD58 are associated with rheumatoid arthritis risk.
0.205638
Genetic variants at CD28, <span class="gene" id="19898481-0-26-31">PRDM1</span> and CD2/CD58 are associated with <span class="disease" id="19898481-0-65-85">rheumatoid arthritis</span> risk.
CTD_human
null
null
Negative
MESH:D000592
null
null
OA
2641
null
glucagon-like-peptide 1
null
28,153,094
Here, we utilized the congruent pharmacological activities of OA and glucagon-like-peptide 1 (GLP-1) in relieving IR and improving liver and pancreas functions and used a synthetic-biology-inspired design principle to engineer a therapeutic gene circuit that enables a concerted action of both drugs.
null
null
null
null
null
Negative
MESH:D001169
null
null
CIA
12482
null
CD20
null
28,094,754
Human umbilical cord MSC, anti-TNF antibody, rhTNFR:Fc fusion protein and anti-CD20 antibody were respectively injected intraperitoneally into CIA mice.
null
null
null
null
null
Negative
MESH:C536766
null
null
glycogen synthesis
85243
null
phosphatidylinositol-3-kinase
null
28,134,520
RT-PCR and Western blotting analyses suggested that the SBFO extract could promote the expression of phosphatidylinositol-3-kinase (PI3K) and glycogen synthesis (GS) while inhibiting the expression of glycogen synthesis kinase-3b (GSK-3b).
null
null
null
null
null
Negative
MESH:D018235
null
null
ASM
80332
null
ADAM33
null
28,056,993
ADAM33, which is expressed in ASM cells, is suggested to play a role in the function of these cells.
null
null
null
27
1
Biomarker
C0030567
Parkinson Disease
disease
Parkinson's disease
6622
SNCA
alpha-synuclein
CTD_human
12,732,244
In humans, mutations in the alpha-synuclein gene or exposure to the neurotoxin 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP) produce Parkinson's disease with loss of dopaminergic neurons and depletion of nigrostriatal dopamine. alpha-Synuclein is a vertebrate-specific component of presynaptic nerve terminals that may function in modulating synaptic transmission.
0.44
In humans, mutations in the <span class="gene" id="12732244-1-28-43">alpha-synuclein</span> gene or exposure to the neurotoxin 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP) produce <span class="disease" id="12732244-1-139-158">Parkinson's disease</span> with loss of dopaminergic neurons and depletion of nigrostriatal dopamine. alpha-Synuclein is a vertebrate-specific component of presynaptic nerve terminals that may function in modulating synaptic transmission.
CTD_human
null
null
Negative
MESH:D014085
null
null
TEM
20344
null
P-selectin
null
28,104,442
Pharmacologic inhibition or knockdown of endothelial P-selectin blocks EP4-mediated cancer cell TEM, and inhibition of P-selectin prevents RCC tumor intravasation in CAM assay.
null
null
null
null
null
Negative
MESH:D017827
null
null
wild type
50873
null
Park2
null
28,086,194
Male Park2 wild type (WT) and KO mice (8 weeks old) were fed on a Lieber-DeCarli diet containing 6.6% ethanol for 2 weeks, and compared their responses.
null
null
null
null
null
Negative
MESH:D013224
null
null
asthmatic
18843
null
BPIFA1
null
28,165,446
Here we show that BPIFA1 levels are reduced in sputum samples from asthmatic patients and that BPIFA1 is secreted basolaterally from healthy, but not asthmatic human bronchial epithelial cultures (HBECs), where it suppresses ASM contractility by binding to and inhibiting the Ca(2+) influx channel Orai1.
null
null
null
3
5
Biomarker
C0009324
Ulcerative Colitis
disease
ulcerative colitis
149233
IL23R
IL23R
CTD_human
18,438,406
We also show that several risk loci are common to ulcerative colitis and Crohn's disease (IL23R, IL12B, HLA, NKX2-3 and MST1), whereas autophagy genes ATG16L1 and IRGM, along with NOD2 (also known as CARD15), are specific for Crohn's disease.
0.278605
We also show that several risk loci are common to <span class="disease" id="18438406-2-50-68">ulcerative colitis</span> and Crohn's disease (<span class="gene" id="18438406-2-90-95">IL23R</span>, IL12B, HLA, NKX2-3 and MST1), whereas autophagy genes ATG16L1 and IRGM, along with NOD2 (also known as CARD15), are specific for Crohn's disease.
CTD_human
5
0
Biomarker
C0020538
Hypertensive disease
group
hypertension
4846
NOS3
endothelial nitric oxide synthase
CTD_human
11,457,755
Insulin resistance, hyperlipidemia, and hypertension in mice lacking endothelial nitric oxide synthase.
0.353426
Insulin resistance, hyperlipidemia, and <span class="disease" id="11457755-0-40-52">hypertension</span> in mice lacking <span class="gene" id="11457755-0-69-102">endothelial nitric oxide synthase</span>.
CTD_human
1
0
Biomarker
C0033626
Protein Deficiency
disease
Protein deficiency
847
CAT
catalase
CTD_human
15,865,262
Protein deficiency in normal rats resulted in a significant increase in hepatic activities of catalase, glutathione peroxidase, glutathione reductase, and glutathione-S-transferase and the levels of lipid peroxidation.
0.2
<span class="disease" id="15865262-5-0-18">Protein deficiency</span> in normal rats resulted in a significant increase in hepatic activities of <span class="gene" id="15865262-5-94-102">catalase</span>, glutathione peroxidase, glutathione reductase, and glutathione-S-transferase and the levels of lipid peroxidation.
CTD_human
null
null
Negative
MESH:C562593
null
null
XPG
7508
null
XPC
null
28,185,850
Our results show that a short DNase I treatment before the immunoreaction, enhances the fluorescence signal of NER proteins, such as XPG, DDB2 and XPC.
null
null
null
null
null
Negative
MESH:D014552
null
null
urinary tract infections
6717
null
Sri
null
28,187,754
The objective of this study was to evaluate urinary tract infections caused by ESBL producers and the antibiotic susceptibility patterns in Sri Lanka.
null
null
null
3
47
Biomarker
C0398791
Nijmegen Breakage Syndrome
disease
NBS
4683
NBN
NBS1
CTD_human
17,395,558
We describe a patient with a NBS clinical phenotype, chromosomal sensitivity to X-rays but without mutations in the whole NBS1 or in the Cernunnos gene.
0.53733
We describe a patient with a <span class="disease" id="17395558-6-29-32">NBS</span> clinical phenotype, chromosomal sensitivity to X-rays but without mutations in the whole <span class="gene" id="17395558-6-122-126">NBS1</span> or in the Cernunnos gene.
CTD_human;ORPHANET
null
null
Negative
MESH:D006980
null
null
hyperthyroid
363287
null
HDAC4
null
28,063,219
In vivo experiments confirmed the downregulation of miR-1 in cardiac tissue from hyperthyroid animals, which was accompanied by increased HDAC4 mRNA levels.
null
null
null
null
null
Negative
MESH:D001523
null
null
Parkinson-like behaviors
21823
null
tyrosine hydroxylase
null
28,025,041
The present study examined age and sex difference in tyrosine hydroxylase (TH) expression and dopamine-dependent and Parkinson-like behaviors following LPS treatment.
null
null
null
35
277
Biomarker
C0035372
Rett Syndrome
disease
RTT
4204
MECP2
MECP2
CTD_human
19,190,538
Rett Syndrome (RTT) is caused in more than 60% of cases by nonsense mutations in the MECP2 gene.
0.92
<span class="disease" id="19190538-1-0-13">Rett Syndrome</span> (<span class="disease" id="19190538-1-15-18">RTT</span>) is caused in more than 60% of cases by nonsense mutations in the <span class="gene" id="19190538-1-85-90">MECP2</span> gene.
CTD_human;ORPHANET;UNIPROT
10
3
Biomarker
C0030567
Parkinson Disease
disease
PD
120892
LRRK2
LRRK2
CTD_human
23,017,109
We report that adult neurogenesis is highly susceptible to multiple "risk factors" for PD, including ?-synuclein accumulation, LRRK2 G2019 mutation and exposure to environmental toxins.
0.44
We report that adult neurogenesis is highly susceptible to multiple "risk factors" for <span class="disease" id="23017109-11-87-89">PD</span>, including &alpha;-synuclein accumulation, <span class="gene" id="23017109-11-127-132">LRRK2</span> G2019 mutation and exposure to environmental toxins.
CTD_human
null
null
Negative
MESH:D064419
null
null
CID
25109
null
rCD1
null
28,063,490
We provide detailed protocols for rCD1 synthesis, CID component expression in and delivery to mammalian cells and the determination of enzyme kinetics inside intact cells by a specially designed image acquisition and data analysis method.
null
null
null
null
null
Negative
MESH:D008175
null
null
spread of lung cancer
13649
null
epidermal growth factor receptors
null
28,015,089
UNASSIGNED: 7362 Background: Activated epidermal growth factor receptors (EGFR) and cyclooxygenase-2 (COX-2) enzyme play a related role in growth, apoptosis, angiogenesis, and metastatic spread of lung cancer.
null
null
null
null
null
Negative
MESH:D008380
null
null
Marek's disease
777930
null
miR-155
null
28,113,043
We also showed that v-rel could rescue the suppression of miR-155 expression observed in Marek's disease virus (MDV)-transformed cell lines, where its functional viral homologue MDV-miR-M4 is overexpressed.
null
null
null
1
0
Biomarker
C0003873
Rheumatoid Arthritis
disease
rheumatoid arthritis
8200
GDF5
GDF-5
CTD_human
18,830,904
Modulatory effects of inflammation and therapy on GDF-5 expression in rheumatoid arthritis synovium.
0.203008
Modulatory effects of inflammation and therapy on <span class="gene" id="18830904-0-50-55">GDF-5</span> expression in <span class="disease" id="18830904-0-70-90">rheumatoid arthritis</span> synovium.
CTD_human
1
0
Biomarker
C0010692
Cystitis
disease
inflammation of bladder
4803
NGF
NGF
CTD_human
16,889,433
Overexpression of NGF is known to mediate inflammation of bladder in this model.
0.280549
Overexpression of <span class="gene" id="16889433-6-18-21">NGF</span> is known to mediate <span class="disease" id="16889433-6-42-65">inflammation of bladder</span> in this model.
CTD_human
null
null
Negative
MESH:D007249
null
null
chronic inflammation
21898
null
TLR-4
null
28,159,232
Moreover, compared with UYDP, FYDP effectively normalized cell proliferation and downregulated mRNA expression levels of pro-inflammatory cytokines, NF-kB, TLR-4, and iNOs in lipopolysaccharide-induced chronic inflammation cells.
null
null
null
1
1
Biomarker
C0021390
Inflammatory Bowel Diseases
group
inflammatory bowel disease
3586
IL10
IL10
CTD_human
23,291,587
Three risk loci shared with ankylosing spondylitis and psoriasis (the MHC class I region, ERAP1 and IL23R and the MHC class I-ERAP1 interaction), as well as two loci shared with inflammatory bowel disease (IL23R and IL10) implicate shared pathogenic pathways in the spondyloarthritides and Beh?et's disease.
0.246909
Three risk loci shared with ankylosing spondylitis and psoriasis (the MHC class I region, ERAP1 and IL23R and the MHC class I-ERAP1 interaction), as well as two loci shared with <span class="disease" id="23291587-8-178-204">inflammatory bowel disease</span> (IL23R and <span class="gene" id="23291587-8-216-220">IL10</span>) implicate shared pathogenic pathways in the spondyloarthritides and Beh&Ccedil;et's disease.
CTD_human
2
0
Biomarker
C0003850
Arteriosclerosis
disease
atherosclerosis
348
APOE
apolipoprotein E
CTD_human
17,118,406
To assess the effect of folic acid on the development of atherosclerosis, male apolipoprotein E-deficient mice fed a standard chow diet received either water (control group) or an aqueous solution of folic acid that provided a dose of 75 microg/kg/day, for ten weeks.
0.292035
To assess the effect of folic acid on the development of <span class="disease" id="17118406-2-57-72">atherosclerosis</span>, male <span class="gene" id="17118406-2-79-95">apolipoprotein E</span>-deficient mice fed a standard chow diet received either water (control group) or an aqueous solution of folic acid that provided a dose of 75 microg/kg/day, for ten weeks.
CTD_human
null
null
Negative
MESH:D004342
null
null
experimental allergic conjunctivitis
20657
null
SOD3
null
28,063,939
The role of extracellular superoxide dismutase 3 (SOD3) in immune response and allergic conjunctival inflammation was examined in a murine model for experimental allergic conjunctivitis (EAC).
null
null
null
null
null
Negative
MESH:D012480
null
null
Salmonella Enteritidis
1077779
null
S1400
null
28,110,775
We demonstrate that combined administration of Lactobacillus salivarius 59 and Enterococcus faecium PXN33 were effective competitive excluders of Salmonella Enteritidis S1400 in poultry.
null
null
null
1
0
Biomarker
C1328840
Autoimmune Lymphoproliferative Syndrome
disease
autoimmune lymphoproliferative syndrome
4893
NRAS
NRAS
CTD_human
17,517,660
NRAS mutation causes a human autoimmune lymphoproliferative syndrome.
0.200549
<span class="gene" id="17517660-0-0-4">NRAS</span> mutation causes a human <span class="disease" id="17517660-0-29-68">autoimmune lymphoproliferative syndrome</span>.
CTD_human
null
null
Negative
MESH:D015179
null
null
colorectal carcinoma
693204
null
microRNA (miR)-619-5p
null
28,101,234
UNASSIGNED: The present study aimed to detect the expression of metastasis associated lung adenocarcinoma transcript 1 (MALAT1) and microRNA (miR)-619-5p in colorectal carcinoma (CRC), and to evaluate the significance of MALAT1 and miR-619-5p expression in the clinical diagnosis and prognosis of CRC.
null
null
null
14
0
Biomarker
C0020538
Hypertensive disease
group
hypertension
1906
EDN1
endothelin-1
CTD_human
15,188,945
Studies suggest that endothelin-1 contributes to the pathogenesis of hypertension.
0.339563
Studies suggest that <span class="gene" id="15188945-1-21-33">endothelin-1</span> contributes to the pathogenesis of <span class="disease" id="15188945-1-69-81">hypertension</span>.
CTD_human
3
0
Biomarker
C0025202
melanoma
disease
cutaneous melanoma
434
ASIP
ASIP
CTD_human
18,488,027
ASIP and TYR pigmentation variants associate with cutaneous melanoma and basal cell carcinoma.
0.222055
<span class="gene" id="18488027-0-0-4">ASIP</span> and TYR pigmentation variants associate with <span class="disease" id="18488027-0-50-68">cutaneous melanoma</span> and basal cell carcinoma.
CTD_human
28
0
Biomarker
C0007131
Non-Small Cell Lung Carcinoma
disease
non-small-cell lung cancer
238
ALK
ALK
CTD_human
22,508,824
Remarkable tumor response to crizotinib in a 14-year-old girl with ALK-positive non-small-cell lung cancer.
0.28
Remarkable tumor response to crizotinib in a 14-year-old girl with <span class="gene" id="22508824-0-67-70">ALK</span>-positive <span class="disease" id="22508824-0-80-106">non-small-cell lung cancer</span>.
CTD_human
1
0
Biomarker
C0007131
Non-Small Cell Lung Carcinoma
disease
non-small cell lung cancer
6774
STAT3
STAT3
CTD_human
21,549,414
Prognostic significance of STAT3 expression and its correlation with chemoresistance of non-small cell lung cancer cells.
0.212637
Prognostic significance of <span class="gene" id="21549414-0-27-32">STAT3</span> expression and its correlation with chemoresistance of <span class="disease" id="21549414-0-88-114">non-small cell lung cancer</span> cells.
CTD_human
1
0
Biomarker
C0028754
Obesity
disease
obese
7436
VLDLR
VLDLR
CTD_human
20,975,297
Similarly, transcripts associated with cholesterol and lipoprotein metabolism showed a differential expression, with APOE and ABCA being decreased and VLDLR being increased in obese versus lean subjects.
0.200824
Similarly, transcripts associated with cholesterol and lipoprotein metabolism showed a differential expression, with APOE and ABCA being decreased and <span class="gene" id="20975297-4-151-156">VLDLR</span> being increased in <span class="disease" id="20975297-4-176-181">obese</span> versus lean subjects.
CTD_human
1
0
Biomarker
C1961099
Precursor T-Cell Lymphoblastic Leukemia-Lymphoma
disease
T-cell acute lymphoblastic leukemia
6134
RPL10
RPL10
CTD_human
23,263,491
Exome sequencing identifies mutation in CNOT3 and ribosomal genes RPL5 and RPL10 in T-cell acute lymphoblastic leukemia.
0.200549
Exome sequencing identifies mutation in CNOT3 and ribosomal genes RPL5 and <span class="gene" id="23263491-0-75-80">RPL10</span> in <span class="disease" id="23263491-0-84-119">T-cell acute lymphoblastic leukemia</span>.
CTD_human
14
20
Biomarker
C0033300
Progeria
disease
Hutchinson-Gilford syndrome
4000
LMNA
lamin
CTD_human
15,726,408
The diagnosis of Hutchinson-Gilford syndrome was confirmed by analysis of the lamin A gene, revealing a heterozygous c.1824C > T (G608G) mutation.
0.75263
The diagnosis of <span class="disease" id="15726408-7-17-44">Hutchinson-Gilford syndrome</span> was confirmed by analysis of the <span class="gene" id="15726408-7-78-83">lamin</span> A gene, revealing a heterozygous c.1824C &gt; T (G608G) mutation.
CTD_human;ORPHANET;UNIPROT
1
0
Biomarker
C0011860
Diabetes Mellitus, Non-Insulin-Dependent
disease
type 2 diabetes
6424
SFRP4
Secreted frizzled-related protein 4
CTD_human
23,140,642
Secreted frizzled-related protein 4 reduces insulin secretion and is overexpressed in type 2 diabetes.
0.200549
<span class="gene" id="23140642-0-0-35">Secreted frizzled-related protein 4</span> reduces insulin secretion and is overexpressed in <span class="disease" id="23140642-0-86-101">type 2 diabetes</span>.
CTD_human
null
null
Negative
MESH:D013274
null
null
gastric cancer
387182
null
miR-187
null
28,098,868
The expression and biological function for miR-187 in gastric cancer remains unknow.
null
null
null
1
0
Biomarker
C0206180
Ki-1+ Anaplastic Large Cell Lymphoma
disease
anaplastic large cell lymphoma
3320
HSP90AA1
HSP90
CTD_human
17,157,164
The HSP90 inhibitor 17-AAG synergizes with doxorubicin and U0126 in anaplastic large cell lymphoma irrespective of ALK expression.
0.200275
The <span class="gene" id="17157164-0-4-9">HSP90</span> inhibitor 17-AAG synergizes with doxorubicin and U0126 in <span class="disease" id="17157164-0-68-98">anaplastic large cell lymphoma</span> irrespective of ALK expression.
CTD_human
2
0
Biomarker
C0024121
Lung Neoplasms
group
lung tumor
2
A2M
alpha-2-macroglobulin
CTD_human
19,180,532
Notably, expression of alpha-2-macroglobulin, transthyretin, alpha-1-antitrypsin, and properdin was in common in different lung tumor models, but regulation of orosomucoid-8, apolipoprotein-A1, apolipoprotein-C3, apolipoprotein-E, glutathione peroxidase-3, plasma retinol-binding protein, and serum amyloid P component was unique when the serum proteomes of c-myc and c-raf tumor bearing mice were compared.
0.2
Notably, expression of <span class="gene" id="19180532-8-23-44">alpha-2-macroglobulin</span>, transthyretin, alpha-1-antitrypsin, and properdin was in common in different <span class="disease" id="19180532-8-123-133">lung tumor</span> models, but regulation of orosomucoid-8, apolipoprotein-A1, apolipoprotein-C3, apolipoprotein-E, glutathione peroxidase-3, plasma retinol-binding protein, and serum amyloid P component was unique when the serum proteomes of c-myc and c-raf tumor bearing mice were compared.
CTD_human
null
null
Negative
MESH:D006528
null
null
HCC
387218
null
miR-26a
null
28,079,894
We found that chemotherapeutic drug doxorubicin (Dox) induced autophagy but decreased the level of miR-26a/b in HCC cells.
null
null
null
null
null
Negative
MESH:C535879
null
null
caudal type homeobox 2
768612
null
transcription factor 4
null
28,106,824
An analysis of cis-acting elements in avian MUC2 gene promoters revealed conservation of binding sites, within a 2.9 kb proximal promoter region, for transcription factors such as caudal type homeobox 2 (CDX2), GATA binding protein 4 (GATA4), hepatocyte nuclear factor 4 a (HNF4A), and transcription factor 4 (TCF4) that are important for maintaining intestinal homeostasis and functional integrity.
null
null
null
null
null
Negative
MESH:C562465
null
null
TBCD
511349
null
ARL2
null
28,126,905
We previously purified TBCD from bovine tissues and showed that it tightly binds the small GTPase ARL2 but appears to be inactive.
null
null
null
null
null
Negative
MESH:D015658
null
null
virus
57314
null
Th1
null
28,077,601
Whereas vaccination of mice with an influenza subunit vaccine induced moderate virus-specific IgG1, vaccination together with RNAdjuvant significantly enhanced this IgG1 and additionally promoted the formation of IgG2b/c, which is indicative of Th1 responses.
null
null
null
2
0
Biomarker
C0023487
Acute Promyelocytic Leukemia
disease
APL
4869
NPM1
NPM
CTD_human
14,508,522
Induction of apoptosis was seen also in the PML-RARalpha-expressing APL cell line NB4, and in several other atRA-sensitive leukemia cell lines, demonstrating that this effect is limited neither to the monocyte lineage nor to the rare NPM-RARalpha fusion variant.
0.405769
Induction of apoptosis was seen also in the PML-RARalpha-expressing <span class="disease" id="14508522-7-68-71">APL</span> cell line NB4, and in several other atRA-sensitive leukemia cell lines, demonstrating that this effect is limited neither to the monocyte lineage nor to the rare <span class="gene" id="14508522-7-234-237">NPM</span>-RARalpha fusion variant.
CTD_human;ORPHANET
1
1
Biomarker
C2931788
Atypical Hemolytic Uremic Syndrome
disease
atypical hemolytic uremic syndrome
629
CFB
complement factor B
CTD_human
17,182,750
Gain-of-function mutations in complement factor B are associated with atypical hemolytic uremic syndrome.
0.201374
Gain-of-function mutations in <span class="gene" id="17182750-0-30-49">complement factor B</span> are associated with <span class="disease" id="17182750-0-70-104">atypical hemolytic uremic syndrome</span>.
CTD_human
null
null
Negative
MESH:D016609
null
null
HD
627
null
BDNF
null
28,031,779
The comparison of BDNF values, using a Kruskal Wallis test, between patients with DM2, in HD and healthy controls showed statistical differences (P < 0.001).
null
null
null
1
0
Biomarker
C0003165
Anthracosis
disease
coal workers' pneumoconiosis
7124
TNF
TNF?
CTD_human
20,005,085
Possible effect of gene polymorphisms on the release of TNF? and IL1 cytokines in coal workers' pneumoconiosis.
0.207012
Possible effect of gene polymorphisms on the release of <span class="gene" id="20005085-0-56-60">TNF&alpha;</span> and IL1 cytokines in <span class="disease" id="20005085-0-82-110">coal workers' pneumoconiosis</span>.
CTD_human
null
null
Negative
MESH:D055370
null
null
lung injury
24482
null
IGF-1
null
28,077,319
CONCLUSIONS: IGFBP-5, IGF-1 and TGF-b1 in the type II AECs play a key role in lung injury caused by bleomycin and pioglitazone attenuates the lung injury/fibrosis by restoring IGFBP-5 and IGF-1 and decreasing TGF-b1 expressions in the type II AECs.
null
null
null
null
null
Negative
MESH:D055752
null
null
small cell lung cancer
7864
null
SCLC
null
28,089,889
Loss of the tumor suppressors RB1 and TP53 and MYC amplification are frequent oncogenic events in small cell lung cancer (SCLC).
null
null
null
1
0
Biomarker
C0007134
Renal Cell Carcinoma
disease
renal cell carcinoma
5058
PAK1
p21-activated kinase 1
CTD_human
17,621,631
Modulation of p21-activated kinase 1 alters the behavior of renal cell carcinoma.
0.200549
Modulation of <span class="gene" id="17621631-0-14-36">p21-activated kinase 1</span> alters the behavior of <span class="disease" id="17621631-0-60-80">renal cell carcinoma</span>.
CTD_human
null
null
Negative
MESH:D006528
null
null
overexpressed in hepatocellular carcinoma
17829
null
Mucin 1
null
28,012,230
Mucin 1 (MUC1), as an oncogene, is overexpressed in hepatocellular carcinoma (HCC) cells and promotes the progression and tumorigenesis of HCC through JNK/TGF-b signaling pathway.
null
null
null
null
null
Negative
MESH:D012559
null
null
schizophrenia
12801
null
CB1
null
28,138,895
The involvement of CB1 receptor ligands in the schizophrenia has already been revealed and confirmed.
null
null
null
null
null
Negative
MESH:C536494
null
null
uveal melanoma
3577;3579
null
CXCR1/2
null
28,129,639
Our data showed that LDX-mediated inhibition of CXCR1/2 abrogated motility and induced apoptosis in cultured cutaneous and uveal melanoma cells and xenografts independently of the molecular defects associated with the malignant phenotype.
null
null
null
25
0
Biomarker
C0004153
Atherosclerosis
disease
atherosclerosis
348
APOE
apoE
CTD_human
9,649,566
Thus, comparisons between the 2/2 and 3/3 mice unequivocally demonstrate that a single amino acid difference (Arg158 Cys) in the apoE protein is sufficient to cause type III HLP and spontaneous atherosclerosis in mice.
0.587329
Thus, comparisons between the 2/2 and 3/3 mice unequivocally demonstrate that a single amino acid difference (Arg158 Cys) in the <span class="gene" id="9649566-6-129-133">apoE</span> protein is sufficient to cause type III HLP and spontaneous <span class="disease" id="9649566-6-194-209">atherosclerosis</span> in mice.
CTD_human;HPO
68
0
Therapeutic
C0020538
Hypertensive disease
group
hypertension
5443
POMC
adrenocorticotropic hormone
CTD_human
17,954,371
Aspirin prevents and partially reverses adrenocorticotropic hormone-induced hypertension in the rat.
0.203846
Aspirin prevents and partially reverses <span class="gene" id="17954371-0-40-67">adrenocorticotropic hormone</span>-induced <span class="disease" id="17954371-0-76-88">hypertension</span> in the rat.
CTD_human
null
null
Negative
MESH:C538037
null
null
T-box 15
14735
null
glypican 4
null
28,105,114
mRNA expression levels of two developmental genes, T-box 15 (Tbx15) and glypican 4 (Gpc4) were detected in fat tissues.
null
null
null
null
null
Negative
MESH:D057851
null
null
PCO
6717
null
Sri
null
28,208,899
MATERIALS AND METHODS: All patients with PCO presenting to Ophthalmology Out Patient Department at Sri Siddhartha Medical College between November 2014 to November 2015 were included.
null
null
null
7
23
Biomarker
C1848533
Ataxia with vitamin E deficiency
disease
Ataxia with isolated vitamin E deficiency
7274
TTPA
TTPA
CTD_human
15,300,460
Ataxia with isolated vitamin E deficiency: neurological phenotype, clinical follow-up and novel mutations in TTPA gene in Italian families.
0.686044
<span class="disease" id="15300460-0-0-41">Ataxia with isolated vitamin E deficiency</span>: neurological phenotype, clinical follow-up and novel mutations in <span class="gene" id="15300460-0-109-113">TTPA</span> gene in Italian families.
CTD_human;ORPHANET;UNIPROT
1
0
Biomarker
C0242422
Parkinsonian Disorders
group
Parkinsonism
142
PARP1
PARP-1
CTD_human
17,640,816
PARP-1 mediates acute neuronal cell death induced by a variety of insults including cerebral ischemia, 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine-induced Parkinsonism, and CNS trauma.
0.2
<span class="gene" id="17640816-3-0-6">PARP-1</span> mediates acute neuronal cell death induced by a variety of insults including cerebral ischemia, 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine-induced <span class="disease" id="17640816-3-156-168">Parkinsonism</span>, and CNS trauma.
CTD_human
1
0
Biomarker
C0005586
Bipolar Disorder
disease
bipolar disorder
6863
TAC1
PPT
CTD_human
15,845,098
An inverse relationship between PPT-A mRNA expression levels and lifetime antipsychotic treatment (Fluphenazine) in the schizophrenic and bipolar disorder groups was found.
0.2
An inverse relationship between <span class="gene" id="15845098-6-32-35">PPT</span>-A mRNA expression levels and lifetime antipsychotic treatment (Fluphenazine) in the schizophrenic and <span class="disease" id="15845098-6-138-154">bipolar disorder</span> groups was found.
CTD_human
1
0
Biomarker
C3714756
Intellectual Disability
group
mental retardation
9901
SRGAP3
MEGAP
CTD_human
21,082,655
Selected genes that are present in the hemizygous state and which might be important for the phenotype of this patient as regards the congenital heart defect, autistic behavior and mental retardation (CAV3, OXTR, and SRGAP3/MEGAP, respectively) are discussed in context of the clinical features.
0.204931
Selected genes that are present in the hemizygous state and which might be important for the phenotype of this patient as regards the congenital heart defect, autistic behavior and <span class="disease" id="21082655-6-181-199">mental retardation</span> (CAV3, OXTR, and <span class="gene" id="21082655-6-217-223">SRGAP3</span>/<span class="gene" id="21082655-6-224-229">MEGAP</span>, respectively) are discussed in context of the clinical features.
CTD_human
null
null
Negative
MESH:D009369
null
null
inha/Tag adrenal tumors
24052
null
Sgcd
null
28,131,743
Besides earlier reported Gata4 and Lhcgr, we found up-regulated Esr1, Prlr-rs1, and down-regulated Grb10, Mmp24, Sgcd, Rerg, Gnas, Nfatc2, Gnrhr, Igf2 in inha/Tag adrenal tumors.
null
null
null
null
null
Negative
MESH:D009369
null
null
tumor
353326
null
MART1
null
28,178,658
MART1, a human melanoma-specific tumor antigen, was used to induce an increased immune reaction, since a MART1-protective response is required to overcome immune tolerance to the melanoma antigen MelanA.
null
null
null
1
2
Biomarker
C0019569
Hirschsprung Disease
disease
Hirschsprung disease
3084
NRG1
NRG1
CTD_human
22,974,608
Aberrant high expression of NRG1 gene in Hirschsprung disease.
0.202747
Aberrant high expression of <span class="gene" id="22974608-0-28-32">NRG1</span> gene in <span class="disease" id="22974608-0-41-61">Hirschsprung disease</span>.
CTD_human
null
null
Negative
MESH:D000796
null
null
Kimura disease
5594
null
extracellular signal regulated kinase 1/2
null
28,108,473
OBJECTIVE: To investigate the expressions of interleukin (IL)-21 and phosphorylated extracellular signal regulated kinase 1/2 (pERK1/2) in Kimura disease (KD) and to correlate the findings with clinical and prognostic variables.
null
null
null
1
0
Biomarker
C0034069
Pulmonary Fibrosis
disease
pulmonary fibrosis
1440
CSF3
G-CSF
CTD_human
17,894,541
Increased granulocyte-colony stimulating factor (G-CSF) and granulocyte-macrophage colony stimulating factor (GM-CSF) levels in BAL fluid from patients with sulfur mustard gas-induced pulmonary fibrosis.
0.2
Increased <span class="gene" id="17894541-0-10-47">granulocyte-colony stimulating factor</span> (<span class="gene" id="17894541-0-49-54">G-CSF</span>) and granulocyte-macrophage colony stimulating factor (GM-CSF) levels in BAL fluid from patients with sulfur mustard gas-induced <span class="disease" id="17894541-0-184-202">pulmonary fibrosis</span>.
CTD_human
1
0
Biomarker
C0853897
Diabetic Cardiomyopathies
disease
diabetic cardiomyopathy
7124
TNF
Tumor necrosis factor-alpha
CTD_human
17,909,696
Tumor necrosis factor-alpha antagonism protects from myocardial inflammation and fibrosis in experimental diabetic cardiomyopathy.
0.2
<span class="gene" id="17909696-0-0-27">Tumor necrosis factor-alpha</span> antagonism protects from myocardial inflammation and fibrosis in experimental <span class="disease" id="17909696-0-106-129">diabetic cardiomyopathy</span>.
CTD_human
null
null
Negative
MESH:D009369
null
null
tumors
117189
null
GD3
null
28,016,257
BEC2 is a murine IgG2b antibody that elicits antiidiotypic response to GD3, a glycosphingolipid overexpressed on membranes of SCLC and other tumors derived from the neural crest.
null
null
null
1
0
Biomarker
C0024305
Lymphoma, Non-Hodgkin
disease
NHL
3123
HLA-DRB1
HLA-DRB1
CTD_human
22,096,508
Finally, control participants with either HLA-DRB1*01:01 or AH 8.1 reported having a family history of NHL twice as likely as those who did not have either allele or haplotype, providing the first empirical evidence that HLA associations may explain some of the well-established relationship between family history and NHL risk.
0.219922
Finally, control participants with either <span class="gene" id="22096508-9-42-50">HLA-DRB1</span>*01:01 or AH 8.1 reported having a family history of <span class="disease" id="22096508-9-103-106">NHL</span> twice as likely as those who did not have either allele or haplotype, providing the first empirical evidence that HLA associations may explain some of the well-established relationship between family history and <span class="disease" id="22096508-9-319-322">NHL</span> risk.
CTD_human
3
9
Biomarker
C2750442
Hypermanganesemia with Dystonia Polycythemia and Cirrhosis
disease
parkinsonism and dystonia with hypermanganesemia, polycythemia, and chronic liver disease
55532
SLC30A10
SLC30A10
CTD_human
22,341,971
Mutations in SLC30A10 cause parkinsonism and dystonia with hypermanganesemia, polycythemia, and chronic liver disease.
0.600549
Mutations in <span class="gene" id="22341971-0-13-21">SLC30A10</span> cause <span class="disease" id="22341971-0-28-117">parkinsonism and dystonia with hypermanganesemia, polycythemia, and chronic liver disease</span>.
CTD_human;ORPHANET;UNIPROT
null
null
Negative
MESH:D002545
null
null
brain ischemia
65960
null
TSG
null
28,049,198
2,3,4',5-tetrahydroxystilbene 2-O-b-D-glucoside (TSG), a monomer of stilbene from polygonummultiflorum, exerts neuroprotection in a range of experimental models such as Alzheimer's disease and brain ischemia.
null
null
null
null
null
Negative
MESH:D004194
null
null
alleviated disease symptoms
117198
null
NS1
null
28,052,239
ICR-suckling mice consumed honeysuckle aqueous extract either before or after intracranial injection with DENV2 showed decreased levels of NS1 RNA and protein expression accompanied with alleviated disease symptoms, decreased virus load, and prolonged survival time.
null
null
null
null
null
Negative
MESH:D000744
null
null
cold agglutinin disease
28395
null
IGHV4-34
null
28,097,289
Furthermore, subset 4 IGs do not bind DNA nor i or I carbohydrate antigens, common targets of IGHV4-34-utilizing antibodies in systemic lupus erythematosus and cold agglutinin disease, respectively.
null
null
null
null
null
Negative
MESH:D009410
null
null
loss of cerebellar neurons
22594
null
Xrcc1
null
28,002,403
Indeed, remarkably, genetic deletion of Parp1 rescued normal cerebellar ADP-ribose levels and reduced the loss of cerebellar neurons and ataxia in Xrcc1-defective mice, identifying a molecular mechanism by which endogenous single-strand breaks trigger neuropathology.
null
null
null
null
null
Negative
MESH:D017563
null
null
interstitial lung disease
260431
null
COPD
null
28,008,651
Chronic obstructive pulmonary disease (COPD) and interstitial lung disease (ILD) were predictors of pre-transplant PMI (b=-2.3, p=0.001 for COPD; b=2.1, p<0.001 for ILD) and percent change in PMI at 12 months post-transplantation relative to baseline (b=19.2, p=0.04 for COPD; b=-20.1, p=0.01 for ILD).
null
null
null
7
1
Biomarker
C0011860
Diabetes Mellitus, Non-Insulin-Dependent
disease
noninsulin-dependent diabetes mellitus
3667
IRS1
insulin receptor substrate-1
CTD_human
8,723,689
Deletion of Gly723 in the insulin receptor substrate-1 of a patient with noninsulin-dependent diabetes mellitus.
0.669945
Deletion of Gly723 in the <span class="gene" id="8723689-0-26-54">insulin receptor substrate-1</span> of a patient with <span class="disease" id="8723689-0-73-111">noninsulin-dependent diabetes mellitus</span>.
CTD_human;UNIPROT
null
null
Negative
MESH:C562591
null
null
XPD
2071
null
ERCC3
null
28,115,302
Thirty-eight polymorphisms in eight NER genes were genotyped by Sequenom MassARRAY platform, including XPA, XPC, DDB2, XPB (ERCC3), XPD (ERCC2), ERCC1, XPF (ERCC4), and XPG (ERCC5).
null
null
null