Datasets:
Dr. Jorge Abreu Vicente
commited on
Commit
•
16e01d5
1
Parent(s):
fba382b
Update sd-nlp-non-tokenized.py
Browse files- sd-nlp-non-tokenized.py +6 -7
sd-nlp-non-tokenized.py
CHANGED
@@ -195,7 +195,7 @@ class SourceDataNLP(datasets.GeneratorBasedBuilder):
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labels = data["label_ids"]["entity_types"]
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tag_mask = [0 if tag == "O" else 1 for tag in labels]
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yield id_, {
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-
"
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"labels": labels,
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"tag_mask": tag_mask,
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}
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@@ -204,26 +204,25 @@ class SourceDataNLP(datasets.GeneratorBasedBuilder):
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geneprod = ["B-GENEPROD", "I-GENEPROD", "B-PROTEIN", "I-PROTEIN", "B-GENE", "I-GENE"]
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tag_mask = [1 if t in geneprod else 0 for t in labels]
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yield id_, {
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-
"
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"labels": data["label_ids"]["geneprod_roles"],
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"tag_mask": tag_mask,
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}
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elif self.config.name == "SMALL_MOL_ROLES":
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labels = data["
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small_mol = ["B-SMALL_MOLECULE", "I-SMALL_MOLECULE"]
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tag_mask = [1 if t in small_mol else 0 for t in labels]
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yield id_, {
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"
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"labels": data["label_ids"]["small_mol_roles"],
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"tag_mask": tag_mask,
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}
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elif self.config.name == "BORING":
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-
yield id_, {"
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elif self.config.name == "PANELIZATION":
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labels = data["label_ids"]["panel_start"]
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tag_mask = [1 if t == "B-PANEL_START" else 0 for t in labels]
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yield id_, {
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"input_ids": data["
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"labels": data["label_ids"]["panel_start"],
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-
"tag_mask": tag_mask,
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}
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labels = data["label_ids"]["entity_types"]
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tag_mask = [0 if tag == "O" else 1 for tag in labels]
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yield id_, {
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+
"words": data["words"],
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"labels": labels,
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"tag_mask": tag_mask,
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}
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geneprod = ["B-GENEPROD", "I-GENEPROD", "B-PROTEIN", "I-PROTEIN", "B-GENE", "I-GENE"]
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tag_mask = [1 if t in geneprod else 0 for t in labels]
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yield id_, {
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"words": data["words"],
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"labels": data["label_ids"]["geneprod_roles"],
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"tag_mask": tag_mask,
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}
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elif self.config.name == "SMALL_MOL_ROLES":
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labels = data["words"]["entity_types"]
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small_mol = ["B-SMALL_MOLECULE", "I-SMALL_MOLECULE"]
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tag_mask = [1 if t in small_mol else 0 for t in labels]
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yield id_, {
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"words": data["words"],
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"labels": data["label_ids"]["small_mol_roles"],
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"tag_mask": tag_mask,
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}
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elif self.config.name == "BORING":
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yield id_, {"words": data["words"], "labels": data["label_ids"]["boring"]}
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elif self.config.name == "PANELIZATION":
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labels = data["label_ids"]["panel_start"]
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tag_mask = [1 if t == "B-PANEL_START" else 0 for t in labels]
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yield id_, {
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+
"input_ids": data["words"],
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"labels": data["label_ids"]["panel_start"],
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}
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