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PDBEurope
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protein_structure_NER_model_v1.2

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Tags:
biology
protein structure
token classification
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mevol commited on
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1 Parent(s): 8cfcce9

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adding manually curated annotations in BioC XML files; adding annotations extracted from curated BioC XML files as JSON and tab-separated CSV; adding manually curated annotations and corresponding sentences extracted from BioC XML as IOB formated input for training

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  1. BioC_XML/4784909_v0.xml +0 -0
  2. BioC_XML/4786784_v0.xml +0 -0
  3. BioC_XML/4792962_v0.xml +0 -0
  4. BioC_XML/4832331_v0.xml +0 -0
  5. BioC_XML/4833862_v0.xml +0 -0
  6. BioC_XML/4848090_v0.xml +0 -0
  7. BioC_XML/4850273_v0.xml +0 -0
  8. BioC_XML/4850288_v0.xml +0 -0
  9. BioC_XML/4852598_v0.xml +0 -0
  10. BioC_XML/4887326_v0.xml +0 -0
  11. annotation_CSV/PMC4784909.csv +0 -0
  12. annotation_CSV/PMC4786784.csv +0 -0
  13. annotation_CSV/PMC4792962.csv +0 -0
  14. annotation_CSV/PMC4832331.csv +0 -0
  15. annotation_CSV/PMC4833862.csv +0 -0
  16. annotation_CSV/PMC4848090.csv +0 -0
  17. annotation_CSV/PMC4850273.csv +0 -0
  18. annotation_CSV/PMC4850288.csv +0 -0
  19. annotation_CSV/PMC4852598.csv +0 -0
  20. annotation_CSV/PMC4887326.csv +0 -0
  21. annotation_IOB/all.tsv +0 -0
  22. annotation_IOB/dev.tsv +0 -0
  23. annotation_IOB/test.tsv +0 -0
  24. annotation_IOB/train.tsv +0 -0
  25. annotation_JSON/annotations.json +0 -0
BioC_XML/4784909_v0.xml ADDED
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BioC_XML/4786784_v0.xml ADDED
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BioC_XML/4792962_v0.xml ADDED
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BioC_XML/4832331_v0.xml ADDED
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BioC_XML/4833862_v0.xml ADDED
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BioC_XML/4848090_v0.xml ADDED
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BioC_XML/4850273_v0.xml ADDED
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BioC_XML/4850288_v0.xml ADDED
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BioC_XML/4852598_v0.xml ADDED
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BioC_XML/4887326_v0.xml ADDED
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annotation_CSV/PMC4784909.csv ADDED
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annotation_CSV/PMC4786784.csv ADDED
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annotation_CSV/PMC4792962.csv ADDED
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annotation_CSV/PMC4832331.csv ADDED
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annotation_CSV/PMC4833862.csv ADDED
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annotation_CSV/PMC4848090.csv ADDED
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annotation_CSV/PMC4850273.csv ADDED
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annotation_CSV/PMC4850288.csv ADDED
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annotation_CSV/PMC4852598.csv ADDED
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annotation_CSV/PMC4887326.csv ADDED
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annotation_IOB/all.tsv ADDED
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annotation_IOB/dev.tsv ADDED
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annotation_IOB/test.tsv ADDED
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annotation_IOB/train.tsv ADDED
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annotation_JSON/annotations.json ADDED
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