Rodrigo1771 commited on
Commit
e3ad795
1 Parent(s): c52de92

added loading script and conll files

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Files changed (3) hide show
  1. dev.conll +3 -0
  2. distemist-ner.py +107 -0
  3. train.conll +3 -0
dev.conll ADDED
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+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:498ef58b80b249be64570e36916403dc44f6af1822b77914d750b054c7d99fcf
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+ size 6961926
distemist-ner.py ADDED
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+ # Loading script for the DisTEMIST NER dataset.
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+ import datasets
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+
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+
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+ logger = datasets.logging.get_logger(__name__)
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+
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+
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+ _CITATION = """\
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+ }"""
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+
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+ _DESCRIPTION = """\
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+ https://temu.bsc.es/multicardioner/
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+ """
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+
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+ _URL = "https://huggingface.co/datasets/Rodrigo1771/distemist-ner/resolve/main/"
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+ _TRAINING_FILE = "train.conll"
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+ _DEV_FILE = "dev.conll"
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+ _TEST_FILE = "test.conll"
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+
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+ class DisTEMISTNERConfig(datasets.BuilderConfig):
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+ """BuilderConfig for DisTEMIST NER dataset"""
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+
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+ def __init__(self, **kwargs):
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+ """BuilderConfig for DisTEMIST NER.
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+
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+ Args:
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+ **kwargs: keyword arguments forwarded to super.
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+ """
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+ super(DisTEMISTNERConfig, self).__init__(**kwargs)
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+
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+
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+ class DisTEMISTNER(datasets.GeneratorBasedBuilder):
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+ """DisTEMIST NER dataset."""
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+
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+ BUILDER_CONFIGS = [
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+ DisTEMISTNERConfig(
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+ name="DisTEMIST NER",
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+ version=datasets.Version("1.0.0"),
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+ description="DisTEMIST NER dataset"),
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+ ]
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+
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+ def _info(self):
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+ return datasets.DatasetInfo(
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+ description=_DESCRIPTION,
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+ features=datasets.Features(
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+ {
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+ "id": datasets.Value("string"),
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+ "tokens": datasets.Sequence(datasets.Value("string")),
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+ "ner_tags": datasets.Sequence(
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+ datasets.features.ClassLabel(
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+ names=[
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+ "O",
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+ "B-ENFERMEDAD",
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+ "I-ENFERMEDAD",
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+ ]
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+ )
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+ ),
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+ }
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+ ),
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+ supervised_keys=None,
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+ homepage=_DESCRIPTION,
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+ citation=_CITATION,
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+ )
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+
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+ def _split_generators(self, dl_manager):
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+ """Returns SplitGenerators."""
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+ urls_to_download = {
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+ "train": f"{_URL}{_TRAINING_FILE}",
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+ "dev": f"{_URL}{_DEV_FILE}",
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+ "test": f"{_URL}{_TEST_FILE}",
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+ }
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+ downloaded_files = dl_manager.download_and_extract(urls_to_download)
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+
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+ return [
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+ datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"filepath": downloaded_files["train"]}),
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+ datasets.SplitGenerator(name=datasets.Split.VALIDATION, gen_kwargs={"filepath": downloaded_files["dev"]}),
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+ datasets.SplitGenerator(name=datasets.Split.TEST, gen_kwargs={"filepath": downloaded_files["test"]}),
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+ ]
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+
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+ def _generate_examples(self, filepath):
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+ logger.info("⏳ Generating examples from = %s", filepath)
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+ with open(filepath, encoding="utf-8") as f:
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+ guid = 0
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+ tokens = []
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+ ner_tags = []
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+ for line in f:
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+ if line.startswith("-DOCSTART-") or line == "" or line == "\n":
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+ if tokens:
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+ yield guid, {
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+ "id": str(guid),
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+ "tokens": tokens,
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+ "ner_tags": ner_tags,
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+ }
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+ guid += 1
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+ tokens = []
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+ ner_tags = []
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+ else:
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+ # DisTEMIST tokens are tab separated
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+ splits = line.split("\t")
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+ tokens.append(splits[0])
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+ ner_tags.append(splits[-1].rstrip())
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+ # last example
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+ yield guid, {
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+ "id": str(guid),
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+ "tokens": tokens,
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+ "ner_tags": ner_tags,
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+ }
train.conll ADDED
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+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:c2d15f5d4187a7e95750d14221e3d4763fcc9fe6c8371687b8bd904a0fa330d1
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+ size 27645634