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Upload example fine-tuning datasets

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  1. example_input_files/cell_classification/cell_type_annotation/cell_type_test_data.dataset/dataset.arrow +3 -0
  2. example_input_files/cell_classification/cell_type_annotation/cell_type_test_data.dataset/dataset_info.json +3 -0
  3. example_input_files/cell_classification/cell_type_annotation/cell_type_test_data.dataset/state.json +3 -0
  4. example_input_files/cell_classification/cell_type_annotation/cell_type_train_data.dataset/dataset.arrow +3 -0
  5. example_input_files/cell_classification/cell_type_annotation/cell_type_train_data.dataset/dataset_info.json +3 -0
  6. example_input_files/cell_classification/cell_type_annotation/cell_type_train_data.dataset/state.json +3 -0
  7. example_input_files/gene_classification/bivalent_promoters/bivalent_gene_labels.txt +107 -0
  8. example_input_files/gene_classification/bivalent_promoters/lys4_only_gene_labels.txt +80 -0
  9. example_input_files/gene_classification/bivalent_promoters/no_methylation_gene_labels.txt +42 -0
  10. example_input_files/gene_classification/bivalent_promoters/panglao_SRA553822-SRS2119548.dataset/dataset.arrow +3 -0
  11. example_input_files/gene_classification/bivalent_promoters/panglao_SRA553822-SRS2119548.dataset/dataset_info.json +3 -0
  12. example_input_files/gene_classification/bivalent_promoters/panglao_SRA553822-SRS2119548.dataset/state.json +3 -0
  13. example_input_files/gene_classification/dosage_sensitive_tfs/README.md +1 -0
  14. example_input_files/gene_classification/dosage_sensitive_tfs/dosage_sens_tf_labels.csv +369 -0
  15. example_input_files/gene_info_table.csv +0 -0
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+ The fine-tuning dataset for transcription factor dosage sensitivity application is 10,000 random cells from Genecorpus-30M. Please note that Genecorpus-30M is a large dataset so loading it for the first time may take some time. The Huggingface .dataset format is designed to cache the data though so future usage will be faster in that this cache allows Datasets to avoid re-processing the entire dataset with each use.
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example_input_files/gene_info_table.csv ADDED
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