sentence: RNA-sequencing analysis was done on the three independent RNA samples from the two experimental conditions.For RiboMethSeq , transfections with TFIP11 siRNA ( siTFIP11 # 1 or siTFIP11 # 2 ) , Coilin siRNA ( siCoilin # 1 or siCoilin # 2 ) , DHX15 siRNA ( siDHX15 # 1 or siDHX15 # 2 ) , control siRNA ( siCtr ) were performed twice each .