sentence: An initial cluster set of 413 protein sequences annotated in genomes of Arabidopsis thaliana ( Kaul et al ., 2000 ) , Vitis vinifera ( Jaillon et al ., 2007 ) , Theobroma cacao ( Argout et al ., 2011 ) , Coffea canephora ( Denoeud et al ., 2014 ) , Phoenix dactylifera ( Al-Mssallem et al ., 2013 ) , Oryza sativa ( Sequencing Project International Rice Genome , 2005 ) , Musa acuminata ( D'Hont et al ., 2012 ) , and Amborella trichopoda ( Albert et al ., 2013 ) were retrieved from GreenPhylDB ( http://www.greenphyl.org/ ) ( Rouard et al ., 2011 ) .