ShuxianZou
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README.md
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## RNA function prediction tasks
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The datasets listed below are collected following the setting in Wang et al. (2023) [4].
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* Cross-species splice site prediction
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* ncRNA family classification
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* RNA modification site prediction
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## Reference
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## RNA function prediction tasks
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The datasets listed below are collected following the setting in Wang et al. (2023) [4].
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* Cross-species splice site prediction
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* 2 datasets: acceptor, donor
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* 4 test species: zebrafish, fruit fly, worm, and plant
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* input sequence: pre-mRNA fragment
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* ncRNA family classification
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* 2 datasets: boundary noise 0, boundary noise 200
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* input sequence: small noncoding RNA with different level of boundary noise
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* RNA modification site prediction
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* 12 labels (modification sites): Am, Cm, Gm, Tm, m1A, m5C, m5U, m6A, m6Am, m7G, Φ, and I.
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## Reference
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