Upload CRISPR_data.py with huggingface_hub
Browse files- CRISPR_data.py +16 -3
CRISPR_data.py
CHANGED
@@ -601,9 +601,22 @@ class CRISPRData(datasets.GeneratorBasedBuilder):
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# dl_manager is a datasets.download.DownloadManager that can be used to download and extract URLS
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# It can accept any type or nested list/dict and will give back the same structure with the url replaced with path to local files.
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# By default the archives will be extracted and a path to a cached folder where they are extracted is returned instead of the archive
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# downloaded_files = dl_manager.download("./test.json.gz")
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ds = datasets.load_dataset('json', data_files=downloaded_files, features=datasets.Features({
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# dl_manager is a datasets.download.DownloadManager that can be used to download and extract URLS
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# It can accept any type or nested list/dict and will give back the same structure with the url replaced with path to local files.
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# By default the archives will be extracted and a path to a cached folder where they are extracted is returned instead of the archive
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proxy_url = os.environ.get("MY_HF_DATASETS_DOWNLOAD_MANAGER_PROXY")
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if proxy_url:
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from datasets.download.download_manager import DownloadManager, DownloadConfig
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dl_manager_proxy = DownloadManager(
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download_config=DownloadConfig(
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proxies={
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"http": proxy_url,
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"https": proxy_url
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}
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)
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)
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downloaded_files = dl_manager_proxy.download("https://github.com/ljw20180420/CRISPRdata/raw/refs/heads/main/dataset.json.gz")
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else:
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downloaded_files = dl_manager.download("https://github.com/ljw20180420/CRISPRdata/raw/refs/heads/main/dataset.json.gz")
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# hf_endpoint = os.environ.get("HF_ENDPOINT", "https://" + "huggingface.co")
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# downloaded_files = dl_manager.download(f"{hf_endpoint}/datasets/ljw20180420/CRISPR_data/resolve/main/dataset.json.gz")
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# downloaded_files = dl_manager.download("./test.json.gz")
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ds = datasets.load_dataset('json', data_files=downloaded_files, features=datasets.Features({
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