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license: cc-by-4.0
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license: cc-by-4.0
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language:
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- en
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tags:
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- biology
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- plant science
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- named entity recognition
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- relation extraction
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pretty_name: PICKLE
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# PICKLE
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PICKLE is the dataset associated with the manuscript *In a PICKLE: A gold standard entity and relation corpus for the molecular plant sciences*. The code repository associated with this dataset can be found [here](https://github.com/serenalotreck/pickle-corpus-code).
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## Format specification
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This dataset is formatted according to the [specifications for use with the DyGIE++ architecture](https://github.com/dwadden/dygiepp/blob/master/doc/data.md).
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## Dataset details
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There are a total of 250 documents in `all.jsonl`, split up into 68%/12%/20% train/dev/test. Each document is an abstract from a scientific paper in the search results for the terms "gibberellic acid" and "jasmonic acid". There are 6,245 entity and 2,149 relation annotations across the 250 documents.
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