File size: 3,843 Bytes
1ef6919
 
 
 
 
ec3cb85
1ef6919
ec3cb85
1ef6919
 
 
 
7463a0f
1ef6919
 
 
e3ca541
1ef6919
 
b250c4a
2384629
fe41a26
2384629
 
 
 
 
 
 
 
 
4ee9af4
 
 
2384629
 
fe41a26
 
2384629
fe41a26
 
c8d4fdc
fe41a26
 
dc06405
fe41a26
dc06405
 
 
 
 
 
 
 
 
 
1ef6919
 
 
 
 
c542d22
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1ef6919
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
ccaac9c
 
 
2384629
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
---
annotations_creators:
- expert-generated
language_creators:
- expert-generated
language:
- en
license:
- unknown
multilinguality:
- monolingual
size_categories:
- 10K<n<100K
source_datasets:
- original
task_categories:
- token-classification
task_ids:
- named-entity-recognition
pretty_name: Bc2GmCorpus
dataset_info:
  config_name: bc2gm_corpus
  features:
  - name: id
    dtype: string
  - name: tokens
    sequence: string
  - name: ner_tags
    sequence:
      class_label:
        names:
          '0': O
          '1': B-GENE
          '2': I-GENE
  splits:
  - name: train
    num_bytes: 6095123
    num_examples: 12500
  - name: validation
    num_bytes: 1215919
    num_examples: 2500
  - name: test
    num_bytes: 2454589
    num_examples: 5000
  download_size: 2154630
  dataset_size: 9765631
configs:
- config_name: bc2gm_corpus
  data_files:
  - split: train
    path: bc2gm_corpus/train-*
  - split: validation
    path: bc2gm_corpus/validation-*
  - split: test
    path: bc2gm_corpus/test-*
  default: true
---

# Dataset Card for bc2gm_corpus

## Table of Contents
- [Dataset Description](#dataset-description)
  - [Dataset Summary](#dataset-summary)
  - [Supported Tasks and Leaderboards](#supported-tasks-and-leaderboards)
  - [Languages](#languages)
- [Dataset Structure](#dataset-structure)
  - [Data Instances](#data-instances)
  - [Data Fields](#data-fields)
  - [Data Splits](#data-splits)
- [Dataset Creation](#dataset-creation)
  - [Curation Rationale](#curation-rationale)
  - [Source Data](#source-data)
  - [Annotations](#annotations)
  - [Personal and Sensitive Information](#personal-and-sensitive-information)
- [Considerations for Using the Data](#considerations-for-using-the-data)
  - [Social Impact of Dataset](#social-impact-of-dataset)
  - [Discussion of Biases](#discussion-of-biases)
  - [Other Known Limitations](#other-known-limitations)
- [Additional Information](#additional-information)
  - [Dataset Curators](#dataset-curators)
  - [Licensing Information](#licensing-information)
  - [Citation Information](#citation-information)
  - [Contributions](#contributions)

## Dataset Description

- **Homepage:** [Github](https://github.com/spyysalo/bc2gm-corpus/)
- **Repository:** [Github](https://github.com/spyysalo/bc2gm-corpus/)
- **Paper:** [NCBI](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2559986/)
- **Leaderboard:**
- **Point of Contact:**

### Dataset Summary

[More Information Needed]

### Supported Tasks and Leaderboards

[More Information Needed]

### Languages

[More Information Needed]

## Dataset Structure

### Data Instances

[More Information Needed]

### Data Fields

- `id`: Sentence identifier.  
- `tokens`: Array of tokens composing a sentence.  
- `ner_tags`: Array of tags, where `0` indicates no disease mentioned, `1` signals the first token of a disease and `2` the subsequent disease tokens.  

### Data Splits

[More Information Needed]

## Dataset Creation

### Curation Rationale

[More Information Needed]

### Source Data

#### Initial Data Collection and Normalization

[More Information Needed]

#### Who are the source language producers?

[More Information Needed]

### Annotations

#### Annotation process

[More Information Needed]

#### Who are the annotators?

[More Information Needed]

### Personal and Sensitive Information

[More Information Needed]

## Considerations for Using the Data

### Social Impact of Dataset

[More Information Needed]

### Discussion of Biases

[More Information Needed]

### Other Known Limitations

[More Information Needed]

## Additional Information

### Dataset Curators

[More Information Needed]

### Licensing Information

[More Information Needed]

### Citation Information

[More Information Needed]

### Contributions

Thanks to [@mahajandiwakar](https://github.com/mahajandiwakar) for adding this dataset.