Update Mimic4Dataset.py

Mimic4Dataset.py

@@ -76,7 +76,26 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
                 "ethnicity": datasets.Value("string"),
                 "age": datasets.Value("int32"),
                 "COND": datasets.Sequence(datasets.Value("string")),
-                
+                "MEDS": {
+                            "signal": datasets.Sequence(
+                                {
+                                    "id": datasets.Sequence(datasets.Value("int32")),
+                                    "value": datasets.Sequence(datasets.Value("float32"))
+                                }
+                            ),
+                            "rate": datasets.Sequence(
+                                {
+                                    "id": datasets.Value("int32"),
+                                    "value": datasets.Sequence(datasets.Value("float32"))
+                                }
+                            ),
+                            "amount": datasets.Sequence(
+                                {
+                                    "id": datasets.Value("int32"),
+                                    "value": datasets.Sequence(datasets.Value("float32"))
+                                }
+                            )
+                        },
                 "PROC":  {
                             "id": datasets.Sequence(datasets.Value("int32")),
                             "value": datasets.Sequence(datasets.Sequence(datasets.Value("float32")))
@@ -150,15 +169,34 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
                     "value": values_chart_val}
             charts = {"signal" : chart_sig,
                     "val" : chart_val}
-    
+
+            #meds signal
+            items_meds_sig = list(meds_features['signal'].keys())
+            values_meds_sig =[meds_features['signal'][i] for i in items_meds_sig ]
+            meds_sig = {"id" : items_meds_sig,
+                    "value": values_meds_sig}
+            #meds rate
+            items_meds_rate = list(meds_features['rate'].keys())
+            values_meds_rate =[meds_features['rate'][i] for i in items_meds_rate ]
+            meds_rate = {"id" : items_meds_rate,
+                    "value": values_meds_rate}
+            #meds amount
+            items_meds_amount = list(meds_features['amount'].keys())
+            values_meds_amount =[meds_features['amount'][i] for i in items_meds_amount ]
+            meds_amount = {"id" : items_meds_amount,
+                    "value": values_meds_amount}
+            meds = {"signal" : meds_sig,
+                    "rate" : meds_rate,
+                    "amount" : meds_amount}
             yield int(hid), {
+                "label" : label,
                 "gender" : gender,
                 "ethnicity" : eth,
                 "age" : age,
+                "COND" : cond_features,
                 "PROC" : procs,
                 "CHART" : charts,
                 "OUT" : outs,
-                "COND" : cond_features,
-                "label" : label
+                "MEDS" : meds
             }