Update Mimic4Dataset.py
Browse files- Mimic4Dataset.py +5 -4
Mimic4Dataset.py
CHANGED
@@ -158,18 +158,19 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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repo_url='https://github.com/healthylaife/MIMIC-IV-Data-Pipeline'
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if os.path.exists('MIMIC-IV-Data-Pipeline-main'):
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path_bench = './MIMIC-IV-Data-Pipeline-main'
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os.chdir(path_bench)
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print('1 : '+os.getcwd())
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else:
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path_bench ='./MIMIC-IV-Data-Pipeline-main'
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print('1 bis : '+os.getcwd())
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subprocess.run(["git", "clone", repo_url, path_bench])
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os.chdir(path_bench)
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os.makedirs('mimic-iv')
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shutil.move(self.mimic_path,path_bench+'/mimic-iv')
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#print('2 : '+os.getcwd())
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self.mimic_path = './mimic-iv/'+version
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#download config file if not custom
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repo_url='https://github.com/healthylaife/MIMIC-IV-Data-Pipeline'
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if os.path.exists('MIMIC-IV-Data-Pipeline-main'):
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path_bench = './MIMIC-IV-Data-Pipeline-main'
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#os.chdir(path_bench)
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print('1 : '+os.getcwd())
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else:
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path_bench ='./MIMIC-IV-Data-Pipeline-main'
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print('1 bis : '+os.getcwd())
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subprocess.run(["git", "clone", repo_url, path_bench])
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#os.chdir(path_bench)
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os.makedirs(path_bench+'/mimic-iv')
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shutil.move(self.mimic_path,path_bench+'/mimic-iv')
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#print('2 : '+os.getcwd())
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os.chdir(path_bench)
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print('5 : '+os.getcwd())
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self.mimic_path = './mimic-iv/'+version
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#download config file if not custom
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