thbndi commited on
Commit
70ce044
1 Parent(s): 30f2144

Update Mimic4Dataset.py

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Files changed (1) hide show
  1. Mimic4Dataset.py +4 -2
Mimic4Dataset.py CHANGED
@@ -194,12 +194,14 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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  file_path, head = urlretrieve(_COHORT, "cohort.py")
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  if not os.path.exists('cohort.py'):
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  shutil.move(file_path, './')
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-
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  data_dir = "./data/dict/"+self.config.name+"/dataDic"
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  sys.path.append(path_bench)
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  config = self.config_path.split('/')[-1]
 
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  script = 'python cohort.py '+ self.config.name +" "+ self.mimic_path+ " "+path_bench+ " "+config
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- os.system(script)
 
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  return [
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  datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"filepath": data_dir}),
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  ]
 
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  file_path, head = urlretrieve(_COHORT, "cohort.py")
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  if not os.path.exists('cohort.py'):
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  shutil.move(file_path, './')
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+
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  data_dir = "./data/dict/"+self.config.name+"/dataDic"
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  sys.path.append(path_bench)
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  config = self.config_path.split('/')[-1]
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+
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  script = 'python cohort.py '+ self.config.name +" "+ self.mimic_path+ " "+path_bench+ " "+config
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+ if not os.path.exists(data_dir) :
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+ os.system(script)
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  return [
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  datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"filepath": data_dir}),
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  ]