Update Mimic4Dataset.py
Browse files- Mimic4Dataset.py +1 -2
Mimic4Dataset.py
CHANGED
@@ -155,7 +155,6 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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path_bench = './MIMIC-IV-Data-Pipeline-main'
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else:
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path_bench ='./MIMIC-IV-Data-Pipeline-main'
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print('1 bis : '+os.getcwd())
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subprocess.run(["git", "clone", repo_url, path_bench])
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os.makedirs(path_bench+'/mimic-iv')
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shutil.move(version,path_bench+'/mimic-iv')
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@@ -188,8 +187,8 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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shutil.move(file_path, './preprocessing/day_intervals_preproc')
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print(self.config.name)
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print(os.getcwd())
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if not os.path.exists('cohort.py'):
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file_path, head = urlretrieve(_COHORT, "cohort.py")
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shutil.move(file_path, './')
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data_dir = "./data/dataDic"
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path_bench = './MIMIC-IV-Data-Pipeline-main'
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else:
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path_bench ='./MIMIC-IV-Data-Pipeline-main'
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subprocess.run(["git", "clone", repo_url, path_bench])
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os.makedirs(path_bench+'/mimic-iv')
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shutil.move(version,path_bench+'/mimic-iv')
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shutil.move(file_path, './preprocessing/day_intervals_preproc')
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print(self.config.name)
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print(os.getcwd())
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+
file_path, head = urlretrieve(_COHORT, "cohort.py")
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if not os.path.exists('cohort.py'):
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shutil.move(file_path, './')
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data_dir = "./data/dataDic"
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