Datasets:
tsantosh7
/
COVID-19_Annotations

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The dataset generation failed because of a cast error
Error code:   DatasetGenerationCastError
Exception:    DatasetGenerationCastError
Message:      An error occurred while generating the dataset

All the data files must have the same columns, but at some point there are 1 new columns ({'RNA'}) and 1 missing columns ({'ABSTRACT'}).

This happened while the csv dataset builder was generating data using

hf://datasets/tsantosh7/COVID-19_Annotations/dev.tsv (at revision b31afad97a9fada96522cc2f5b080338d4a3f7cd)

Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback:    Traceback (most recent call last):
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 2011, in _prepare_split_single
                  writer.write_table(table)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 585, in write_table
                  pa_table = table_cast(pa_table, self._schema)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2302, in table_cast
                  return cast_table_to_schema(table, schema)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2256, in cast_table_to_schema
                  raise CastError(
              datasets.table.CastError: Couldn't cast
              RNA: string
              O: string
              -- schema metadata --
              pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 471
              to
              {'ABSTRACT': Value(dtype='string', id=None), 'O': Value(dtype='string', id=None)}
              because column names don't match
              
              During handling of the above exception, another exception occurred:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1321, in compute_config_parquet_and_info_response
                  parquet_operations = convert_to_parquet(builder)
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 935, in convert_to_parquet
                  builder.download_and_prepare(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1027, in download_and_prepare
                  self._download_and_prepare(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1122, in _download_and_prepare
                  self._prepare_split(split_generator, **prepare_split_kwargs)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1882, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 2013, in _prepare_split_single
                  raise DatasetGenerationCastError.from_cast_error(
              datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
              
              All the data files must have the same columns, but at some point there are 1 new columns ({'RNA'}) and 1 missing columns ({'ABSTRACT'}).
              
              This happened while the csv dataset builder was generating data using
              
              hf://datasets/tsantosh7/COVID-19_Annotations/dev.tsv (at revision b31afad97a9fada96522cc2f5b080338d4a3f7cd)
              
              Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)

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ABSTRACT
string
O
string
:
O
A
O
region
O
of
O
the
O
bovine
B-SPEC
coronavirus
B-SPEC
(
O
BCV
B-SPEC
)
O
genome
O
that
O
functions
O
as
O
a
O
packaging
O
signal
O
has
O
been
O
cloned
O
.
O
The
O
291
O
-
O
nucleotide
B-CHED
clone
O
shares
O
72
O
%
O
homology
O
with
O
the
O
region
O
of
O
mouse
B-DISO
hepatitis
I-DISO
coronavirus
B-SPEC
(
O
MHV
B-SPEC
)
O
gene
O
1b
O
that
O
contains
O
the
O
packaging
O
signal
O
.
O
The
O
data
O
demonstrate
O
that
O
the
O
BCV
B-SPEC
genome
O
contains
O
a
O
sequence
O
that
O
is
O
conserved
O
at
O
both
O
the
O
sequence
O
and
O
functional
O
levels
O
,
O
thus
O
broadening
O
our
O
insight
O
into
O
coronavirus
B-SPEC
packaging
O
.
O
TITLE
O
:
O
Comparison
O
of
O
systemic
O
cytokine
O
levels
O
in
O
patients
O
with
O
acute
B-DISO
respiratory
I-DISO
distress
I-DISO
syndrome
I-DISO
,
O
severe
O
pneumonia
O
,
O
and
O
controls
O
.
O
ABSTRACT
O
:
O
End of preview.