wyxu commited on
Commit
4dfcfec
1 Parent(s): 935d5ba

Update Genome_database.py

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Files changed (1) hide show
  1. Genome_database.py +2 -2
Genome_database.py CHANGED
@@ -81,7 +81,7 @@ class GenomeDataset(datasets.GeneratorBasedBuilder):
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  region_type = 'coding'
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  product = feature.qualifiers.get('product', ['Unknown'])[0]
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  if feature.type == 'CDS':
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- translation = feature.qualifiers.get('translation', [''])[0]
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  specific_class = 'Protein'
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  else:
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  translation = 'NA'
@@ -90,7 +90,7 @@ class GenomeDataset(datasets.GeneratorBasedBuilder):
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  region_type = feature.type
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  specific_class = feature.qualifiers.get('regulatory_class', ['regulatory'])[0]
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  translation = 'NA'
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- product = 'NA'
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  elif feature.type == 'gene':
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  continue
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  else:
 
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  region_type = 'coding'
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  product = feature.qualifiers.get('product', ['Unknown'])[0]
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  if feature.type == 'CDS':
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+ translation = feature.qualifiers.get('translation', ['NA'])[0]
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  specific_class = 'Protein'
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  else:
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  translation = 'NA'
 
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  region_type = feature.type
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  specific_class = feature.qualifiers.get('regulatory_class', ['regulatory'])[0]
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  translation = 'NA'
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+ product = feature.qualifiers.get('product', ['NA'])[0]
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  elif feature.type == 'gene':
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  continue
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  else: