feat: push custom model

1_Pooling/config.json

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+{
+  "word_embedding_dimension": 768,
+  "pooling_mode_cls_token": true,
+  "pooling_mode_mean_tokens": false,
+  "pooling_mode_max_tokens": false,
+  "pooling_mode_mean_sqrt_len_tokens": false,
+  "pooling_mode_weightedmean_tokens": false,
+  "pooling_mode_lasttoken": false,
+  "include_prompt": true
+}

README.md

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+---
+license: apache-2.0
+datasets:
+- fine-tuned/NFCorpus-8-8-gpt-4o-2024-05-13-855191
+- allenai/c4
+language:
+- en
+pipeline_tag: feature-extraction
+tags:
+- sentence-transformers
+- feature-extraction
+- sentence-similarity
+- mteb
+- Medical
+- Nutrition
+- Information
+- Retrieval
+- Dataset
+---
+This model is a fine-tuned version of [**jinaai/jina-embeddings-v2-base-en**](https://huggingface.co/jinaai/jina-embeddings-v2-base-en) designed for the following use case:
+
+medical information retrieval
+
+## How to Use
+This model can be easily integrated into your NLP pipeline for tasks such as text classification, sentiment analysis, entity recognition, and more. Here's a simple example to get you started:
+
+```python
+from sentence_transformers import SentenceTransformer
+from sentence_transformers.util import cos_sim
+
+model = SentenceTransformer(
+    'fine-tuned/NFCorpus-8-8-gpt-4o-2024-05-13-855191',
+    trust_remote_code=True
+)
+
+embeddings = model.encode([
+    'first text to embed',
+    'second text to embed'
+])
+print(cos_sim(embeddings[0], embeddings[1]))
+```

config.json

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+{
+  "_name_or_path": "mytmp/finetuned_model",
+  "architectures": [
+    "JinaBertModel"
+  ],
+  "attention_probs_dropout_prob": 0.0,
+  "attn_implementation": null,
+  "auto_map": {
+    "AutoConfig": "configuration_bert.JinaBertConfig",
+    "AutoModel": "modeling_bert.JinaBertModel",
+    "AutoModelForMaskedLM": "jinaai/jina-bert-implementation--modeling_bert.JinaBertForMaskedLM",
+    "AutoModelForSequenceClassification": "jinaai/jina-bert-implementation--modeling_bert.JinaBertForSequenceClassification"
+  },
+  "classifier_dropout": null,
+  "emb_pooler": "mean",
+  "feed_forward_type": "geglu",
+  "gradient_checkpointing": false,
+  "hidden_act": "gelu",
+  "hidden_dropout_prob": 0.1,
+  "hidden_size": 768,
+  "initializer_range": 0.02,
+  "intermediate_size": 3072,
+  "layer_norm_eps": 1e-12,
+  "max_position_embeddings": 8192,
+  "model_max_length": 8192,
+  "model_type": "bert",
+  "num_attention_heads": 12,
+  "num_hidden_layers": 12,
+  "pad_token_id": 0,
+  "position_embedding_type": "alibi",
+  "torch_dtype": "float32",
+  "transformers_version": "4.40.2",
+  "type_vocab_size": 2,
+  "use_cache": true,
+  "vocab_size": 30528
+}

config_sentence_transformers.json

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+{
+  "__version__": {
+    "sentence_transformers": "2.7.0",
+    "transformers": "4.40.2",
+    "pytorch": "2.3.0+cu121"
+  },
+  "prompts": {},
+  "default_prompt_name": null
+}

configuration_bert.py

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+# coding=utf-8
+# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
+# Copyright (c) 2018, NVIDIA CORPORATION.  All rights reserved.
+# Copyright (c) 2023 Jina AI GmbH. All rights reserved.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+""" BERT model configuration"""
+from collections import OrderedDict
+from typing import Mapping
+
+from transformers.configuration_utils import PretrainedConfig
+from transformers.onnx import OnnxConfig
+from transformers.utils import logging
+
+
+logger = logging.get_logger(__name__)
+
+
+class JinaBertConfig(PretrainedConfig):
+    r"""
+    This is the configuration class to store the configuration of a [`JinaBertModel`]. It is used to
+    instantiate a BERT model according to the specified arguments, defining the model architecture. Instantiating a
+    configuration with the defaults will yield a similar configuration to that of the BERT
+    [bert-base-uncased](https://huggingface.co/bert-base-uncased) architecture.
+
+    Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
+    documentation from [`PretrainedConfig`] for more information.
+
+
+    Args:
+        vocab_size (`int`, *optional*, defaults to 30522):
+            Vocabulary size of the BERT model. Defines the number of different tokens that can be represented by the
+            `inputs_ids` passed when calling [`BertModel`] or [`TFBertModel`].
+        hidden_size (`int`, *optional*, defaults to 768):
+            Dimensionality of the encoder layers and the pooler layer.
+        num_hidden_layers (`int`, *optional*, defaults to 12):
+            Number of hidden layers in the Transformer encoder.
+        num_attention_heads (`int`, *optional*, defaults to 12):
+            Number of attention heads for each attention layer in the Transformer encoder.
+        intermediate_size (`int`, *optional*, defaults to 3072):
+            Dimensionality of the "intermediate" (often named feed-forward) layer in the Transformer encoder.
+        hidden_act (`str` or `Callable`, *optional*, defaults to `"gelu"`):
+            The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
+            `"relu"`, `"silu"` and `"gelu_new"` are supported.
+        hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
+            The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
+        attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
+            The dropout ratio for the attention probabilities.
+        max_position_embeddings (`int`, *optional*, defaults to 512):
+            The maximum sequence length that this model might ever be used with. Typically set this to something large
+            just in case (e.g., 512 or 1024 or 2048).
+        type_vocab_size (`int`, *optional*, defaults to 2):
+            The vocabulary size of the `token_type_ids` passed when calling [`BertModel`] or [`TFBertModel`].
+        initializer_range (`float`, *optional*, defaults to 0.02):
+            The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
+        layer_norm_eps (`float`, *optional*, defaults to 1e-12):
+            The epsilon used by the layer normalization layers.
+        position_embedding_type (`str`, *optional*, defaults to `"absolute"`):
+            Type of position embedding. Choose one of `"absolute"`, `"relative_key"`, `"relative_key_query"`. For
+            positional embeddings use `"absolute"`. For more information on `"relative_key"`, please refer to
+            [Self-Attention with Relative Position Representations (Shaw et al.)](https://arxiv.org/abs/1803.02155).
+            For more information on `"relative_key_query"`, please refer to *Method 4* in [Improve Transformer Models
+            with Better Relative Position Embeddings (Huang et al.)](https://arxiv.org/abs/2009.13658).
+        is_decoder (`bool`, *optional*, defaults to `False`):
+            Whether the model is used as a decoder or not. If `False`, the model is used as an encoder.
+        use_cache (`bool`, *optional*, defaults to `True`):
+            Whether or not the model should return the last key/values attentions (not used by all models). Only
+            relevant if `config.is_decoder=True`.
+        classifier_dropout (`float`, *optional*):
+            The dropout ratio for the classification head.
+        feed_forward_type (`str`, *optional*, defaults to `"original"`):
+            The type of feed forward layer to use in the bert layers.
+            Can be one of GLU variants, e.g. `"reglu"`, `"geglu"`
+        emb_pooler (`str`, *optional*, defaults to `None`):
+            The function to use for pooling the last layer embeddings to get the sentence embeddings.
+            Should be one of `None`, `"mean"`.
+        attn_implementation (`str`, *optional*, defaults to `"torch"`):
+            The implementation of the self-attention layer. Can be one of:
+            - `None` for the original implementation,
+            - `torch` for the PyTorch SDPA implementation,
+
+    Examples:
+
+    ```python
+    >>> from transformers import JinaBertConfig, JinaBertModel
+
+    >>> # Initializing a JinaBert configuration
+    >>> configuration = JinaBertConfig()
+
+    >>> # Initializing a model (with random weights) from the configuration
+    >>> model = JinaBertModel(configuration)
+
+    >>> # Accessing the model configuration
+    >>> configuration = model.config
+
+    >>> # Encode text inputs
+    >>> embeddings = model.encode(text_inputs)
+    ```"""
+    model_type = "bert"
+
+    def __init__(
+        self,
+        vocab_size=30522,
+        hidden_size=768,
+        num_hidden_layers=12,
+        num_attention_heads=12,
+        intermediate_size=3072,
+        hidden_act="gelu",
+        hidden_dropout_prob=0.1,
+        attention_probs_dropout_prob=0.1,
+        max_position_embeddings=512,
+        type_vocab_size=2,
+        initializer_range=0.02,
+        layer_norm_eps=1e-12,
+        pad_token_id=0,
+        position_embedding_type="absolute",
+        use_cache=True,
+        classifier_dropout=None,
+        feed_forward_type="original",
+        emb_pooler=None,
+        attn_implementation='torch',
+        **kwargs,
+    ):
+        super().__init__(pad_token_id=pad_token_id, **kwargs)
+
+        self.vocab_size = vocab_size
+        self.hidden_size = hidden_size
+        self.num_hidden_layers = num_hidden_layers
+        self.num_attention_heads = num_attention_heads
+        self.hidden_act = hidden_act
+        self.intermediate_size = intermediate_size
+        self.hidden_dropout_prob = hidden_dropout_prob
+        self.attention_probs_dropout_prob = attention_probs_dropout_prob
+        self.max_position_embeddings = max_position_embeddings
+        self.type_vocab_size = type_vocab_size
+        self.initializer_range = initializer_range
+        self.layer_norm_eps = layer_norm_eps
+        self.position_embedding_type = position_embedding_type
+        self.use_cache = use_cache
+        self.classifier_dropout = classifier_dropout
+        self.feed_forward_type = feed_forward_type
+        self.emb_pooler = emb_pooler
+        self.attn_implementation = attn_implementation
+
+class JinaBertOnnxConfig(OnnxConfig):
+    @property
+    def inputs(self) -> Mapping[str, Mapping[int, str]]:
+        if self.task == "multiple-choice":
+            dynamic_axis = {0: "batch", 1: "choice", 2: "sequence"}
+        else:
+            dynamic_axis = {0: "batch", 1: "sequence"}
+        return OrderedDict(
+            [
+                ("input_ids", dynamic_axis),
+                ("attention_mask", dynamic_axis),
+                ("token_type_ids", dynamic_axis),
+            ]
+        )

model.safetensors

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+version https://git-lfs.github.com/spec/v1
+oid sha256:47a34bb01795135a1182d355662630028b67848d3198db20efa709af06f25f54
+size 549493968

modules.json

@@ -0,0 +1,20 @@
+[
+  {
+    "idx": 0,
+    "name": "0",
+    "path": "",
+    "type": "sentence_transformers.models.Transformer"
+  },
+  {
+    "idx": 1,
+    "name": "1",
+    "path": "1_Pooling",
+    "type": "sentence_transformers.models.Pooling"
+  },
+  {
+    "idx": 2,
+    "name": "2",
+    "path": "2_Normalize",
+    "type": "sentence_transformers.models.Normalize"
+  }
+]

sentence_bert_config.json

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+{
+  "max_seq_length": 8192,
+  "do_lower_case": false
+}

special_tokens_map.json

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+{
+  "cls_token": {
+    "content": "[CLS]",
+    "lstrip": false,
+    "normalized": false,
+    "rstrip": false,
+    "single_word": false
+  },
+  "mask_token": {
+    "content": "[MASK]",
+    "lstrip": false,
+    "normalized": false,
+    "rstrip": false,
+    "single_word": false
+  },
+  "pad_token": {
+    "content": "[PAD]",
+    "lstrip": false,
+    "normalized": false,
+    "rstrip": false,
+    "single_word": false
+  },
+  "sep_token": {
+    "content": "[SEP]",
+    "lstrip": false,
+    "normalized": false,
+    "rstrip": false,
+    "single_word": false
+  },
+  "unk_token": {
+    "content": "[UNK]",
+    "lstrip": false,
+    "normalized": false,
+    "rstrip": false,
+    "single_word": false
+  }
+}

tokenizer_config.json

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+{
+  "added_tokens_decoder": {
+    "0": {
+      "content": "[PAD]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "100": {
+      "content": "[UNK]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "101": {
+      "content": "[CLS]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "102": {
+      "content": "[SEP]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "103": {
+      "content": "[MASK]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    }
+  },
+  "clean_up_tokenization_spaces": true,
+  "cls_token": "[CLS]",
+  "do_basic_tokenize": true,
+  "do_lower_case": true,
+  "mask_token": "[MASK]",
+  "model_max_length": 2147483648,
+  "never_split": null,
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "strip_accents": null,
+  "tokenize_chinese_chars": true,
+  "tokenizer_class": "BertTokenizer",
+  "unk_token": "[UNK]"
+}

training_args.bin

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+oid sha256:5cbf542337e430976b82de1a077fff76986a9a1f00a31c8d617848695275dac2
+size 5176