import os import logging import warnings from medomni.common.registry import registry from medomni.datasets.builders.base_dataset_builder import BaseDatasetBuilder from medomni.datasets.datasets.laion_dataset import LaionDataset from medomni.datasets.datasets.cc_sbu_dataset import CCSBUDataset, CCSBUAlignDataset from medomni.datasets.datasets.med_dataset import MedDataset, MedAlignDataset from torch.utils.data import Dataset @registry.register_builder("cc_sbu") class CCSBUBuilder(BaseDatasetBuilder): train_dataset_cls = CCSBUDataset DATASET_CONFIG_DICT = {"default": "configs/datasets/cc_sbu/defaults.yaml"} def _download_ann(self): pass def _download_vis(self): pass def build(self): self.build_processors() build_info = self.config.build_info datasets = dict() split = "train" # create datasets # [NOTE] return inner_datasets (wds.DataPipeline) dataset_cls = self.train_dataset_cls datasets[split] = dataset_cls( vis_processor=self.vis_processors[split], text_processor=self.text_processors[split], location=build_info.storage, ).inner_dataset return datasets @registry.register_builder("laion") class LaionBuilder(BaseDatasetBuilder): train_dataset_cls = LaionDataset DATASET_CONFIG_DICT = {"default": "configs/datasets/laion/defaults.yaml"} def _download_ann(self): pass def _download_vis(self): pass def build(self): self.build_processors() build_info = self.config.build_info datasets = dict() split = "train" # create datasets # [NOTE] return inner_datasets (wds.DataPipeline) dataset_cls = self.train_dataset_cls datasets[split] = dataset_cls( vis_processor=self.vis_processors[split], text_processor=self.text_processors[split], location=build_info.storage, ).inner_dataset return datasets @registry.register_builder("cc_sbu_align") class CCSBUAlignBuilder(BaseDatasetBuilder): train_dataset_cls = CCSBUAlignDataset DATASET_CONFIG_DICT = { "default": "configs/datasets/cc_sbu/align.yaml", } def build_datasets(self): # at this point, all the annotations and image/videos should be all downloaded to the specified locations. logging.info("Building datasets...") self.build_processors() build_info = self.config.build_info storage_path = build_info.storage datasets = dict() if not os.path.exists(storage_path): warnings.warn("storage path {} does not exist.".format(storage_path)) # create datasets dataset_cls = self.train_dataset_cls datasets['train'] = dataset_cls( vis_processor=self.vis_processors["train"], text_processor=self.text_processors["train"], ann_paths=[os.path.join(storage_path, 'filter_cap.json')], vis_root=os.path.join(storage_path, 'image'), ) return datasets @registry.register_builder("med") class MedAlignBuilder(BaseDatasetBuilder): train_dataset_cls = MedAlignDataset DATASET_CONFIG_DICT = { "default": "configs/datasets/medinterp/align.yaml", } def build_datasets(self): # at this point, all the annotations and image/videos should be all downloaded to the specified locations. logging.info("Building datasets...") self.build_processors() build_info = self.config.build_info storage_path = build_info.storage datasets = dict() if not os.path.exists(storage_path): warnings.warn("storage path {} does not exist.".format(storage_path)) # create datasets dataset_cls = self.train_dataset_cls datasets['train'] = dataset_cls( ann_paths=[os.path.join(storage_path, 'train.json')], vis_root='/home/zhouhy/physionet.org/files/mimic-cxr-jpg/2.0.0/files', ) datasets['eval'] = dataset_cls( ann_paths=[os.path.join(storage_path, 'val.json')], vis_root='/home/zhouhy/physionet.org/files/mimic-cxr-jpg/2.0.0/files', ) return datasets