Text Generation
Transformers
Safetensors
English
llama
biology
medical
Inference Endpoints
text-generation-inference
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@@ -32,12 +32,14 @@ We explore supervised multitask pre-training by proposing ***Instruction Pre-Tra
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  - Domain-Specific Models Pre-Trained from Llama3-8B:
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  - [Finance-Llama3-8B](https://huggingface.co/instruction-pretrain/finance-Llama3-8B)
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  - [Biomedicine-Llama3-8B](https://huggingface.co/instruction-pretrain/medicine-Llama3-8B)
 
 
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  ## Domain-Adaptive Continued Pre-Training
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  Following [AdaptLLM](https://huggingface.co/AdaptLLM/medicine-chat), we augment the domain-specific raw corpora with instruction-response pairs generated by our [context-based instruction synthesizer](https://huggingface.co/instruction-pretrain/instruction-synthesizer).
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- For example, to chat with the biomedicine-Llama3-8B model:
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  ```python
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  from transformers import AutoModelForCausalLM, AutoTokenizer
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@@ -63,6 +65,32 @@ pred = tokenizer.decode(outputs[answer_start:], skip_special_tokens=True)
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  print(pred)
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  ```
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  ## Citation
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  If you find our work helpful, please cite us:
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  - Domain-Specific Models Pre-Trained from Llama3-8B:
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  - [Finance-Llama3-8B](https://huggingface.co/instruction-pretrain/finance-Llama3-8B)
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  - [Biomedicine-Llama3-8B](https://huggingface.co/instruction-pretrain/medicine-Llama3-8B)
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+ - General Instruction-Augmented Corpora: [general-instruction-augmented-corpora](https://huggingface.co/datasets/instruction-pretrain/general-instruction-augmented-corpora)
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+ - Domain-Specific Instruction-Augmented Corpora (no finance data to avoid ethical issues): [medicine-instruction-augmented-corpora](https://huggingface.co/datasets/instruction-pretrain/medicine-instruction-augmented-corpora)
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  ## Domain-Adaptive Continued Pre-Training
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  Following [AdaptLLM](https://huggingface.co/AdaptLLM/medicine-chat), we augment the domain-specific raw corpora with instruction-response pairs generated by our [context-based instruction synthesizer](https://huggingface.co/instruction-pretrain/instruction-synthesizer).
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+ ### 1. To chat with the biomedicine-Llama3-8B model:
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  ```python
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  from transformers import AutoModelForCausalLM, AutoTokenizer
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  print(pred)
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  ```
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+ ### 2. To evaluate our models on the domain-specific tasks
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+ 1. Setup dependencies
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+ ```bash
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+ git clone https://github.com/microsoft/LMOps
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+ cd LMOps/adaptllm
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+ pip install -r requirements.txt
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+ ```
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+
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+ 2. Evaluate
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+ ```bash
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+ DOMAIN='biomedicine'
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+
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+ # if the model can fit on a single GPU: set MODEL_PARALLEL=False
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+ # elif the model is too large to fit on a single GPU: set MODEL_PARALLEL=True
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+ MODEL_PARALLEL=False
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+
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+ # number of GPUs, chosen from [1,2,4,8]
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+ N_GPU=1
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+
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+ # Set as True
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+ add_bos_token=True
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+
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+ bash scripts/inference.sh ${DOMAIN} 'instruction-pretrain/medicine-Llama3-8B' ${add_bos_token} ${MODEL_PARALLEL} ${N_GPU}
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+ ```
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+
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+
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  ## Citation
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  If you find our work helpful, please cite us:
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