GelGenie-nnUNet-Dec-2023 / predict_from_raw_data_args.json
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{
"folder_with_segs_from_prev_stage": null,
"list_of_lists_or_source_folder": "/exports/csce/eddie/eng/groups/DunnGroup/matthew/nnunet_training/full_set_with_val_dec_23/raw_data/test_set",
"num_parts": 1,
"num_processes_preprocessing": 3,
"num_processes_segmentation_export": 3,
"output_folder_or_list_of_truncated_output_files": "/exports/csce/eddie/eng/groups/DunnGroup/matthew/nnunet_training/full_set_with_val_dec_23/test_inference/epoch_best_fold_0",
"overwrite": true,
"part_id": 0,
"save_probabilities": false
}