modify dataset key name
Browse files- configs/inference.json +2 -2
- configs/metadata.json +2 -1
- configs/train.json +3 -3
configs/inference.json
CHANGED
@@ -7,8 +7,8 @@
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"ckpt_dir": "$@bundle_root + '/models'",
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"output_dir": "$@bundle_root + '/eval'",
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"data_list_file_path": "$@bundle_root + '/configs/datalist.json'",
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-
"
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-
"test_datalist": "$monai.data.load_decathlon_datalist(@data_list_file_path, data_list_key='testing', base_dir=@
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"device": "$torch.device('cuda:0' if torch.cuda.is_available() else 'cpu')",
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"amp": true,
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"network_def": {
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"ckpt_dir": "$@bundle_root + '/models'",
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"output_dir": "$@bundle_root + '/eval'",
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"data_list_file_path": "$@bundle_root + '/configs/datalist.json'",
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+
"dataset_dir": "/workspace/data/medical/brats2018challenge",
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+
"test_datalist": "$monai.data.load_decathlon_datalist(@data_list_file_path, data_list_key='testing', base_dir=@dataset_dir)",
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"device": "$torch.device('cuda:0' if torch.cuda.is_available() else 'cpu')",
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"amp": true,
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"network_def": {
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configs/metadata.json
CHANGED
@@ -1,7 +1,8 @@
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{
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"schema": "https://github.com/Project-MONAI/MONAI-extra-test-data/releases/download/0.8.1/meta_schema_20220324.json",
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"version": "0.3.
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"changelog": {
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"0.3.7": "restructure readme to match updated template",
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"0.3.6": "added train/val graphs",
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"0.3.5": "update prepare datalist function",
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{
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"schema": "https://github.com/Project-MONAI/MONAI-extra-test-data/releases/download/0.8.1/meta_schema_20220324.json",
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+
"version": "0.3.8",
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"changelog": {
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+
"0.3.8": "modify dataset key name",
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"0.3.7": "restructure readme to match updated template",
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"0.3.6": "added train/val graphs",
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"0.3.5": "update prepare datalist function",
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configs/train.json
CHANGED
@@ -7,9 +7,9 @@
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"ckpt_dir": "$@bundle_root + '/models'",
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"output_dir": "$@bundle_root + '/eval'",
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"data_list_file_path": "$@bundle_root + '/configs/datalist.json'",
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-
"
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-
"train_datalist": "$monai.data.load_decathlon_datalist(@data_list_file_path, data_list_key='training', base_dir=@
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-
"val_datalist": "$monai.data.load_decathlon_datalist(@data_list_file_path, data_list_key='validation', base_dir=@
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"device": "$torch.device('cuda:0' if torch.cuda.is_available() else 'cpu')",
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"epochs": 300,
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"val_interval": 1,
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"ckpt_dir": "$@bundle_root + '/models'",
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"output_dir": "$@bundle_root + '/eval'",
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"data_list_file_path": "$@bundle_root + '/configs/datalist.json'",
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+
"dataset_dir": "/workspace/data/medical/brats2018challenge",
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+
"train_datalist": "$monai.data.load_decathlon_datalist(@data_list_file_path, data_list_key='training', base_dir=@dataset_dir)",
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+
"val_datalist": "$monai.data.load_decathlon_datalist(@data_list_file_path, data_list_key='validation', base_dir=@dataset_dir)",
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"device": "$torch.device('cuda:0' if torch.cuda.is_available() else 'cpu')",
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"epochs": 300,
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"val_interval": 1,
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