A19grey commited on
Commit
2a24c63
·
1 Parent(s): f877d59

added logging for gradio demo loading and molecule geometry creation

Browse files
Files changed (3) hide show
  1. app.py +15 -4
  2. history.md +3 -0
  3. quantum_utils.py +11 -0
app.py CHANGED
@@ -209,12 +209,22 @@ def create_interface():
209
 
210
  def set_client_for_session(request: gr.Request):
211
  """Initialize client with user's IP token to handle rate limiting."""
 
212
  try:
213
- x_ip_token = request.headers['x-ip-token']
214
- return Client("A19grey/Cuda-Quantum-Molecular-Playground", headers={"x-ip-token": x_ip_token})
 
 
215
  except Exception as e:
216
- logger.error(f"Error setting client: {e}")
217
- return None
 
 
 
 
 
 
 
218
 
219
  # Load available molecules
220
  molecules = load_molecules()
@@ -505,6 +515,7 @@ def create_interface():
505
  )
506
 
507
  # Add load event to set client
 
508
  demo.load(set_client_for_session, None, client)
509
 
510
  return demo
 
209
 
210
  def set_client_for_session(request: gr.Request):
211
  """Initialize client with user's IP token to handle rate limiting."""
212
+ logger.info(f"Setting client for session with request: {request}")
213
  try:
214
+ # Try to initialize client with HF token from environment variable
215
+ client = Client("A19grey/Cuda-Quantum-Molecular-Playground", hf_token=os.getenv("HF_TOKEN"))
216
+ logger.info(f"Client initialized with A19grey HF token")
217
+ return client
218
  except Exception as e:
219
+ logger.error(f"Error setting client with HF token: {e}")
220
+ try:
221
+ # Fallback to using x-ip-token from request headers
222
+ x_ip_token = request.headers['x-ip-token']
223
+ logger.info(f"Client initialized with x-ip-token from request headers")
224
+ return Client("A19grey/Cuda-Quantum-Molecular-Playground", headers={"x-ip-token": x_ip_token})
225
+ except Exception as e:
226
+ logger.error(f"Error setting client with x-ip-token: {e}")
227
+ return None
228
 
229
  # Load available molecules
230
  molecules = load_molecules()
 
515
  )
516
 
517
  # Add load event to set client
518
+ logger.info("Adding load event to set client")
519
  demo.load(set_client_for_session, None, client)
520
 
521
  return demo
history.md CHANGED
@@ -247,3 +247,6 @@ Steps tried so far:
247
  * Fixed potential issues with implicit hydrogens
248
 
249
  ## 2023-10-14: Removed the 'Optimization Status' line from VQE optimization results in app.py. The output now only shows Final Energy, Parameter Count, Hamiltonian Terms, Iterations, and Scale Factor, along with any message output, making it clear if the simulation succeeded or failed without confusion.
 
 
 
 
247
  * Fixed potential issues with implicit hydrogens
248
 
249
  ## 2023-10-14: Removed the 'Optimization Status' line from VQE optimization results in app.py. The output now only shows Final Energy, Parameter Count, Hamiltonian Terms, Iterations, and Scale Factor, along with any message output, making it clear if the simulation succeeded or failed without confusion.
250
+
251
+ ## 2023-10-07: Added detailed debug logging to expand_geometry in quantum_utils.py.
252
+ - Added logging.debug statements to trace the input geometry, computed coordinates, center of mass, vector from center for each atom, and the final scaled coordinates output.
quantum_utils.py CHANGED
@@ -207,20 +207,31 @@ def expand_geometry(geometry_template: List[List[Any]], scale_factor: float) ->
207
  List of (atom_symbol, (x, y, z)) tuples with scaled coordinates
208
  """
209
  scaled_geometry = []
 
 
 
210
  # Find the center of mass (assuming equal weights for simplicity)
211
  coords = np.array([coord for _, coord in geometry_template])
 
212
  center = np.mean(coords, axis=0)
 
213
 
214
  for atom_symbol, coord in geometry_template:
215
  # Convert coord to numpy array for vector operations
216
  coord = np.array(coord)
 
 
217
  # Calculate vector from center
218
  vec = coord - center
 
 
219
  # Scale the vector and add back to center
220
  scaled_coord = center + vec * scale_factor
 
221
  # Convert back to tuple
222
  scaled_geometry.append((atom_symbol, tuple(scaled_coord)))
223
 
 
224
  return scaled_geometry
225
 
226
 
 
207
  List of (atom_symbol, (x, y, z)) tuples with scaled coordinates
208
  """
209
  scaled_geometry = []
210
+ logging.debug("expand_geometry: Starting with scale_factor=%f", scale_factor)
211
+ logging.debug("expand_geometry: Input geometry_template=%s", geometry_template)
212
+
213
  # Find the center of mass (assuming equal weights for simplicity)
214
  coords = np.array([coord for _, coord in geometry_template])
215
+ logging.debug("expand_geometry: Computed coordinates array: %s", coords)
216
  center = np.mean(coords, axis=0)
217
+ logging.debug("expand_geometry: Computed center of mass: %s", center)
218
 
219
  for atom_symbol, coord in geometry_template:
220
  # Convert coord to numpy array for vector operations
221
  coord = np.array(coord)
222
+ logging.debug("expand_geometry: Processing atom: %s", atom_symbol)
223
+ logging.debug("expand_geometry: Original coordinate: %s", coord)
224
  # Calculate vector from center
225
  vec = coord - center
226
+ logging.debug("expand_geometry: Computed vector from center: %s", vec)
227
+
228
  # Scale the vector and add back to center
229
  scaled_coord = center + vec * scale_factor
230
+ logging.debug("expand_geometry: Scaled coordinate: %s", scaled_coord)
231
  # Convert back to tuple
232
  scaled_geometry.append((atom_symbol, tuple(scaled_coord)))
233
 
234
+ logging.debug("expand_geometry: Final scaled geometry: %s", scaled_geometry)
235
  return scaled_geometry
236
 
237