poetry.lock

[[package]]
name = "altair"
version = "4.2.2"
description = "Altair: A declarative statistical visualization library for Python."
category = "main"
optional = false
python-versions = ">=3.7"

[package.dependencies]
entrypoints = "*"
jinja2 = "*"
jsonschema = ">=3.0"
numpy = "*"
pandas = ">=0.18"
toolz = "*"

[package.extras]
dev = ["black", "docutils", "ipython", "flake8", "pytest", "sphinx", "mistune (<2.0.0)", "m2r", "vega-datasets", "recommonmark"]

[[package]]
name = "anyio"
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description = "High level compatibility layer for multiple asynchronous event loop implementations"
category = "main"
optional = false
python-versions = ">=3.6.2"

[package.dependencies]
idna = ">=2.8"
sniffio = ">=1.1"

[package.extras]
doc = ["packaging", "sphinx-rtd-theme", "sphinx-autodoc-typehints (>=1.2.0)"]
test = ["coverage[toml] (>=4.5)", "hypothesis (>=4.0)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "contextlib2", "uvloop (<0.15)", "mock (>=4)", "uvloop (>=0.15)"]
trio = ["trio (>=0.16,<0.22)"]

[[package]]
name = "appnope"
version = "0.1.3"
description = "Disable App Nap on macOS >= 10.9"
category = "main"
optional = false
python-versions = "*"

[[package]]
name = "argon2-cffi"
version = "21.3.0"
description = "The secure Argon2 password hashing algorithm."
category = "main"
optional = false
python-versions = ">=3.6"

[package.dependencies]
argon2-cffi-bindings = "*"

[package.extras]
dev = ["pre-commit", "cogapp", "tomli", "coverage[toml] (>=5.0.2)", "hypothesis", "pytest", "sphinx", "sphinx-notfound-page", "furo"]
docs = ["sphinx", "sphinx-notfound-page", "furo"]
tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pytest"]

[[package]]
name = "argon2-cffi-bindings"
version = "21.2.0"
description = "Low-level CFFI bindings for Argon2"
category = "main"
optional = false
python-versions = ">=3.6"

[package.dependencies]
cffi = ">=1.0.1"

[package.extras]
dev = ["pytest", "cogapp", "pre-commit", "wheel"]
tests = ["pytest"]

[[package]]
name = "arrow"
version = "1.2.3"
description = "Better dates & times for Python"
category = "main"
optional = false
python-versions = ">=3.6"

[package.dependencies]
python-dateutil = ">=2.7.0"

[[package]]
name = "asttokens"
version = "2.2.1"
description = "Annotate AST trees with source code positions"
category = "main"
optional = false
python-versions = "*"

[package.dependencies]
six = "*"

[package.extras]
test = ["astroid", "pytest"]

[[package]]
name = "attrs"
version = "22.2.0"
description = "Classes Without Boilerplate"
category = "main"
optional = false
python-versions = ">=3.6"

[package.extras]
cov = ["attrs", "coverage-enable-subprocess", "coverage[toml] (>=5.3)"]
dev = ["attrs"]
docs = ["furo", "sphinx", "myst-parser", "zope.interface", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier"]
tests = ["attrs", "zope.interface"]
tests-no-zope = ["hypothesis", "pympler", "pytest (>=4.3.0)", "pytest-xdist", "cloudpickle", "mypy (>=0.971,<0.990)", "pytest-mypy-plugins"]
tests_no_zope = ["hypothesis", "pympler", "pytest (>=4.3.0)", "pytest-xdist", "cloudpickle", "mypy (>=0.971,<0.990)", "pytest-mypy-plugins"]

[[package]]
name = "backcall"
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description = "Specifications for callback functions passed in to an API"
category = "main"
optional = false
python-versions = "*"

[[package]]
name = "beautifulsoup4"
version = "4.11.2"
description = "Screen-scraping library"
category = "main"
optional = false
python-versions = ">=3.6.0"

[package.dependencies]
soupsieve = ">1.2"

[package.extras]
html5lib = ["html5lib"]
lxml = ["lxml"]

[[package]]
name = "biopython"
version = "1.81"
description = "Freely available tools for computational molecular biology."
category = "main"
optional = false
python-versions = ">=3.7"

[package.dependencies]
numpy = "*"

[[package]]
name = "bleach"
version = "6.0.0"
description = "An easy safelist-based HTML-sanitizing tool."
category = "main"
optional = false
python-versions = ">=3.7"

[package.dependencies]
six = ">=1.9.0"
webencodings = "*"

[package.extras]
css = ["tinycss2 (>=1.1.0,<1.2)"]

[[package]]
name = "blinker"
version = "1.5"
description = "Fast, simple object-to-object and broadcast signaling"
category = "main"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"

[[package]]
name = "cachetools"
version = "5.3.0"
description = "Extensible memoizing collections and decorators"
category = "main"
optional = false
python-versions = "~=3.7"

[[package]]
name = "certifi"
version = "2022.12.7"
description = "Python package for providing Mozilla's CA Bundle."
category = "main"
optional = false
python-versions = ">=3.6"

[[package]]
name = "cffi"
version = "1.15.1"
description = "Foreign Function Interface for Python calling C code."
category = "main"
optional = false
python-versions = "*"

[package.dependencies]
pycparser = "*"

[[package]]
name = "charset-normalizer"
version = "3.1.0"
description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
category = "main"
optional = false
python-versions = ">=3.7.0"

[[package]]
name = "click"
version = "8.1.3"
description = "Composable command line interface toolkit"
category = "main"
optional = false
python-versions = ">=3.7"

[package.dependencies]
colorama = {version = "*", markers = "platform_system == \"Windows\""}

[[package]]
name = "colorama"
version = "0.4.6"
description = "Cross-platform colored terminal text."
category = "main"
optional = false
python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,!=3.6.*,>=2.7"

[[package]]
name = "comm"
version = "0.1.2"
description = "Jupyter Python Comm implementation, for usage in ipykernel, xeus-python etc."
category = "main"
optional = false
python-versions = ">=3.6"

[package.dependencies]
traitlets = ">=5.3"

[package.extras]
test = ["pytest"]

[[package]]
name = "debugpy"
version = "1.6.6"
description = "An implementation of the Debug Adapter Protocol for Python"
category = "main"
optional = false
python-versions = ">=3.7"

[[package]]
name = "decorator"
version = "5.1.1"
description = "Decorators for Humans"
category = "main"
optional = false
python-versions = ">=3.5"

[[package]]
name = "defusedxml"
version = "0.7.1"
description = "XML bomb protection for Python stdlib modules"
category = "main"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"

[[package]]
name = "deprecation"
version = "2.1.0"
description = "A library to handle automated deprecations"
category = "main"
optional = false
python-versions = "*"

[package.dependencies]
packaging = "*"

[[package]]
name = "entrypoints"
version = "0.4"
description = "Discover and load entry points from installed packages."
category = "main"
optional = false
python-versions = ">=3.6"

[[package]]
name = "exceptiongroup"
version = "1.1.1"
description = "Backport of PEP 654 (exception groups)"
category = "dev"
optional = false
python-versions = ">=3.7"

[package.extras]
test = ["pytest (>=6)"]

[[package]]
name = "executing"
version = "1.2.0"
description = "Get the currently executing AST node of a frame, and other information"
category = "main"
optional = false
python-versions = "*"

[package.extras]
tests = ["asttokens", "pytest", "littleutils", "rich"]

[[package]]
name = "fastjsonschema"
version = "2.16.3"
description = "Fastest Python implementation of JSON schema"
category = "main"
optional = false
python-versions = "*"

[package.extras]
devel = ["colorama", "jsonschema", "json-spec", "pylint", "pytest", "pytest-benchmark", "pytest-cache", "validictory"]

[[package]]
name = "fqdn"
version = "1.5.1"
description = "Validates fully-qualified domain names against RFC 1123, so that they are acceptable to modern bowsers"
category = "main"
optional = false
python-versions = ">=2.7, !=3.0, !=3.1, !=3.2, !=3.3, !=3.4, <4"

[[package]]
name = "gitdb"
version = "4.0.10"
description = "Git Object Database"
category = "main"
optional = false
python-versions = ">=3.7"

[package.dependencies]
smmap = ">=3.0.1,<6"

[[package]]
name = "gitpython"
version = "3.1.31"
description = "GitPython is a Python library used to interact with Git repositories"
category = "main"
optional = false
python-versions = ">=3.7"

[package.dependencies]
gitdb = ">=4.0.1,<5"

[[package]]
name = "idna"
version = "3.4"
description = "Internationalized Domain Names in Applications (IDNA)"
category = "main"
optional = false
python-versions = ">=3.5"

[[package]]
name = "importlib-metadata"
version = "6.0.0"
description = "Read metadata from Python packages"
category = "main"
optional = false
python-versions = ">=3.7"

[package.dependencies]
zipp = ">=0.5"

[package.extras]
docs = ["sphinx (>=3.5)", "jaraco.packaging (>=9)", "rst.linker (>=1.9)", "furo", "sphinx-lint", "jaraco.tidelift (>=1.4)"]
perf = ["ipython"]
testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "flake8 (<5)", "pytest-cov", "pytest-enabler (>=1.3)", "packaging", "pyfakefs", "flufl.flake8", "pytest-perf (>=0.9.2)", "pytest-black (>=0.3.7)", "pytest-mypy (>=0.9.1)", "pytest-flake8", "importlib-resources (>=1.3)"]

[[package]]
name = "iniconfig"
version = "2.0.0"
description = "brain-dead simple config-ini parsing"
category = "dev"
optional = false
python-versions = ">=3.7"

[[package]]
name = "ipykernel"
version = "6.21.3"
description = "IPython Kernel for Jupyter"
category = "main"
optional = false
python-versions = ">=3.8"

[package.dependencies]
appnope = {version = "*", markers = "platform_system == \"Darwin\""}
comm = ">=0.1.1"
debugpy = ">=1.6.5"
ipython = ">=7.23.1"
jupyter-client = ">=6.1.12"
jupyter-core = ">=4.12,<5.0.0 || >=5.1.0"
matplotlib-inline = ">=0.1"
nest-asyncio = "*"
packaging = "*"
psutil = "*"
pyzmq = ">=20"
tornado = ">=6.1"
traitlets = ">=5.4.0"

[package.extras]
cov = ["coverage", "curio", "matplotlib", "pytest-cov", "trio"]
docs = ["myst-parser", "pydata-sphinx-theme", "sphinx", "sphinx-autodoc-typehints", "sphinxcontrib-github-alt", "sphinxcontrib-spelling", "trio"]
pyqt5 = ["pyqt5"]
pyside6 = ["pyside6"]
test = ["flaky", "ipyparallel", "pre-commit", "pytest-asyncio", "pytest-cov", "pytest-timeout", "pytest (>=7.0)"]

[[package]]
name = "ipyspeck"
version = "0.6.1"
description = "Speck Jupyter Widget"
category = "main"
optional = false
python-versions = "*"

[package.dependencies]
ipywidgets = ">=7.0.0"
jupyter-packaging = ">=0.3.0"

[[package]]
name = "ipython"
version = "8.11.0"
description = "IPython: Productive Interactive Computing"
category = "main"
optional = false
python-versions = ">=3.8"

[package.dependencies]
appnope = {version = "*", markers = "sys_platform == \"darwin\""}
backcall = "*"
colorama = {version = "*", markers = "sys_platform == \"win32\""}
decorator = "*"
jedi = ">=0.16"
matplotlib-inline = "*"
pexpect = {version = ">4.3", markers = "sys_platform != \"win32\""}
pickleshare = "*"
prompt-toolkit = ">=3.0.30,<3.0.37 || >3.0.37,<3.1.0"
pygments = ">=2.4.0"
stack-data = "*"
traitlets = ">=5"

[package.extras]
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black = ["black"]
doc = ["ipykernel", "setuptools (>=18.5)", "sphinx (>=1.3)", "sphinx-rtd-theme", "docrepr", "matplotlib", "stack-data", "pytest (<7)", "typing-extensions", "pytest (<7.1)", "pytest-asyncio", "testpath"]
kernel = ["ipykernel"]
nbconvert = ["nbconvert"]
nbformat = ["nbformat"]
notebook = ["ipywidgets", "notebook"]
parallel = ["ipyparallel"]
qtconsole = ["qtconsole"]
test = ["pytest (<7.1)", "pytest-asyncio", "testpath"]
test_extra = ["pytest (<7.1)", "pytest-asyncio", "testpath", "curio", "matplotlib (!=3.2.0)", "nbformat", "numpy (>=1.21)", "pandas", "trio"]

[[package]]
name = "ipython-genutils"
version = "0.2.0"
description = "Vestigial utilities from IPython"
category = "main"
optional = false
python-versions = "*"

[[package]]
name = "ipywidgets"
version = "7.6.3"
description = "IPython HTML widgets for Jupyter"
category = "main"
optional = false
python-versions = "*"

[package.dependencies]
ipykernel = ">=4.5.1"
ipython = {version = ">=4.0.0", markers = "python_version >= \"3.3\""}
jupyterlab-widgets = {version = ">=1.0.0", markers = "python_version >= \"3.6\""}
nbformat = ">=4.2.0"
traitlets = ">=4.3.1"
widgetsnbextension = ">=3.5.0,<3.6.0"

[package.extras]
test = ["pytest (>=3.6.0)", "pytest-cov", "mock"]

[[package]]
name = "isoduration"
version = "20.11.0"
description = "Operations with ISO 8601 durations"
category = "main"
optional = false
python-versions = ">=3.7"

[package.dependencies]
arrow = ">=0.15.0"

[[package]]
name = "jedi"
version = "0.18.2"
description = "An autocompletion tool for Python that can be used for text editors."
category = "main"
optional = false
python-versions = ">=3.6"

[package.dependencies]
parso = ">=0.8.0,<0.9.0"

[package.extras]
docs = ["Jinja2 (==2.11.3)", "MarkupSafe (==1.1.1)", "Pygments (==2.8.1)", "alabaster (==0.7.12)", "babel (==2.9.1)", "chardet (==4.0.0)", "commonmark (==0.8.1)", "docutils (==0.17.1)", "future (==0.18.2)", "idna (==2.10)", "imagesize (==1.2.0)", "mock (==1.0.1)", "packaging (==20.9)", "pyparsing (==2.4.7)", "pytz (==2021.1)", "readthedocs-sphinx-ext (==2.1.4)", "recommonmark (==0.5.0)", "requests (==2.25.1)", "six (==1.15.0)", "snowballstemmer (==2.1.0)", "sphinx-rtd-theme (==0.4.3)", "sphinx (==1.8.5)", "sphinxcontrib-serializinghtml (==1.1.4)", "sphinxcontrib-websupport (==1.2.4)", "urllib3 (==1.26.4)"]
qa = ["flake8 (==3.8.3)", "mypy (==0.782)"]
testing = ["Django (<3.1)", "attrs", "colorama", "docopt", "pytest (<7.0.0)"]

[[package]]
name = "jinja2"
version = "3.1.2"
description = "A very fast and expressive template engine."
category = "main"
optional = false
python-versions = ">=3.7"

[package.dependencies]
MarkupSafe = ">=2.0"

[package.extras]
i18n = ["Babel (>=2.7)"]

[[package]]
name = "jsonpointer"
version = "2.3"
description = "Identify specific nodes in a JSON document (RFC 6901)"
category = "main"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"

[[package]]
name = "jsonschema"
version = "4.17.3"
description = "An implementation of JSON Schema validation for Python"
category = "main"
optional = false
python-versions = ">=3.7"

[package.dependencies]
attrs = ">=17.4.0"
fqdn = {version = "*", optional = true, markers = "extra == \"format-nongpl\""}
idna = {version = "*", optional = true, markers = "extra == \"format-nongpl\""}
isoduration = {version = "*", optional = true, markers = "extra == \"format-nongpl\""}
jsonpointer = {version = ">1.13", optional = true, markers = "extra == \"format-nongpl\""}
pyrsistent = ">=0.14.0,<0.17.0 || >0.17.0,<0.17.1 || >0.17.1,<0.17.2 || >0.17.2"
rfc3339-validator = {version = "*", optional = true, markers = "extra == \"format-nongpl\""}
rfc3986-validator = {version = ">0.1.0", optional = true, markers = "extra == \"format-nongpl\""}
uri-template = {version = "*", optional = true, markers = "extra == \"format-nongpl\""}
webcolors = {version = ">=1.11", optional = true, markers = "extra == \"format-nongpl\""}

[package.extras]
format = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3987", "uri-template", "webcolors (>=1.11)"]
format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-validator (>0.1.0)", "uri-template", "webcolors (>=1.11)"]

[[package]]
name = "jupyter-client"
version = "8.0.3"
description = "Jupyter protocol implementation and client libraries"
category = "main"
optional = false
python-versions = ">=3.8"

[package.dependencies]
jupyter-core = ">=4.12,<5.0.0 || >=5.1.0"
python-dateutil = ">=2.8.2"
pyzmq = ">=23.0"
tornado = ">=6.2"
traitlets = ">=5.3"

[package.extras]
docs = ["ipykernel", "myst-parser", "pydata-sphinx-theme", "sphinx-autodoc-typehints", "sphinx (>=4)", "sphinxcontrib-github-alt", "sphinxcontrib-spelling"]
test = ["codecov", "coverage", "ipykernel (>=6.14)", "mypy", "paramiko", "pre-commit", "pytest", "pytest-cov", "pytest-jupyter[client] (>=0.4.1)", "pytest-timeout"]

[[package]]
name = "jupyter-core"
version = "5.2.0"
description = "Jupyter core package. A base package on which Jupyter projects rely."
category = "main"
optional = false
python-versions = ">=3.8"

[package.dependencies]
platformdirs = ">=2.5"
pywin32 = {version = ">=1.0", markers = "sys_platform == \"win32\" and platform_python_implementation != \"PyPy\""}
traitlets = ">=5.3"

[package.extras]
docs = ["myst-parser", "sphinx-autodoc-typehints", "sphinxcontrib-github-alt", "sphinxcontrib-spelling", "traitlets"]
test = ["ipykernel", "pre-commit", "pytest", "pytest-cov", "pytest-timeout"]

[[package]]
name = "jupyter-events"
version = "0.6.3"
description = "Jupyter Event System library"
category = "main"
optional = false
python-versions = ">=3.7"

[package.dependencies]
jsonschema = {version = ">=3.2.0", extras = ["format-nongpl"]}
python-json-logger = ">=2.0.4"
pyyaml = ">=5.3"
rfc3339-validator = "*"
rfc3986-validator = ">=0.1.1"
traitlets = ">=5.3"

[package.extras]
cli = ["click", "rich"]
docs = ["jupyterlite-sphinx", "myst-parser", "pydata-sphinx-theme", "sphinxcontrib-spelling"]
test = ["click", "coverage", "pre-commit", "pytest-asyncio (>=0.19.0)", "pytest-console-scripts", "pytest-cov", "pytest (>=7.0)", "rich"]

[[package]]
name = "jupyter-packaging"
version = "0.12.3"
description = "Jupyter Packaging Utilities."
category = "main"
optional = false
python-versions = ">=3.7"

[package.dependencies]
deprecation = "*"
packaging = "*"
tomlkit = "*"

[package.extras]
test = ["build", "coverage", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytest-timeout"]

[[package]]
name = "jupyter-server"
version = "2.4.0"
description = "The backend—i.e. core services, APIs, and REST endpoints—to Jupyter web applications."
category = "main"
optional = false
python-versions = ">=3.8"

[package.dependencies]
anyio = ">=3.1.0"
argon2-cffi = "*"
jinja2 = "*"
jupyter-client = ">=7.4.4"
jupyter-core = ">=4.12,<5.0.0 || >=5.1.0"
jupyter-events = ">=0.4.0"
jupyter-server-terminals = "*"
nbconvert = ">=6.4.4"
nbformat = ">=5.3.0"
packaging = "*"
prometheus-client = "*"
pywinpty = {version = "*", markers = "os_name == \"nt\""}
pyzmq = ">=24"
send2trash = "*"
terminado = ">=0.8.3"
tornado = ">=6.2.0"
traitlets = ">=5.6.0"
websocket-client = "*"

[package.extras]
docs = ["docutils (<0.20)", "ipykernel", "jinja2", "jupyter-client", "jupyter-server", "mistune (<1.0.0)", "myst-parser", "nbformat", "prometheus-client", "pydata-sphinx-theme", "send2trash", "sphinx-autodoc-typehints", "sphinxcontrib-github-alt", "sphinxcontrib-openapi", "sphinxcontrib-spelling", "sphinxemoji", "tornado", "typing-extensions"]
test = ["ipykernel", "pre-commit", "pytest-console-scripts", "pytest-jupyter[server] (>=0.4)", "pytest-timeout", "pytest (>=7.0)", "requests"]

[[package]]
name = "jupyter-server-terminals"
version = "0.4.4"
description = "A Jupyter Server Extension Providing Terminals."
category = "main"
optional = false
python-versions = ">=3.8"

[package.dependencies]
pywinpty = {version = ">=2.0.3", markers = "os_name == \"nt\""}
terminado = ">=0.8.3"

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bleach = "*"
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[[package]]
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[[package]]
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[[package]]
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[package.dependencies]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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[package.dependencies]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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[[package]]
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