Update code/alphafold_featureVector.py

code/alphafold_featureVector.py

@@ -43,7 +43,7 @@ def getModelInfo(uniprotID, varPos, wt, models_we_need, path_to_output_files ):
         sasa_val = freesasa(pdb_path, path_to_output_files, uniprotID, mod, varPos, wt)
         newCol = {}
         coordDict = {}
-        with gzip.open(filename, mode='rb') as f:
+        with gzip.open(pdb_path, mode='rb') as f:
             for line in f:
                 line = line.decode()
                 if line[0:4].strip() == 'ATOM' and line[13:15].strip() == 'CA':