fatmacankara commited on
Commit
d5f50f8
·
1 Parent(s): 22b381a

Update code/process_input.py

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  1. code/process_input.py +3 -0
code/process_input.py CHANGED
@@ -20,6 +20,9 @@ def clean_data(input_set):
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  elif '.txt' in input_set:
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  data = pd.read_csv(input_set, sep='\t', names=['uniprotID', 'wt', 'pos', 'mut'])
 
 
 
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  data = data[['uniprotID', 'wt', 'pos', 'mut']]
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  # Exclude termination codons, synonymous mutations and any non-standard residues such as Sec, 4 or 6.
 
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  elif '.txt' in input_set:
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  data = pd.read_csv(input_set, sep='\t', names=['uniprotID', 'wt', 'pos', 'mut'])
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+
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+ else:
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+ data = pd.DataFrame(columns = ['uniprotID', 'wt', 'pos', 'mut'])
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  data = data[['uniprotID', 'wt', 'pos', 'mut']]
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  # Exclude termination codons, synonymous mutations and any non-standard residues such as Sec, 4 or 6.