location merger fix

Domain2GO.py

@@ -31,7 +31,7 @@ with st.sidebar:
                 value='>sp|O18783|PLMN_NOTEU\n'
                 'MEYGKVIFLFLLFLKSGQGESLENYIKTEGASLSNSQKKQFVASSTEECEALCEKETEFVCRSFEHYNKEQKCVIMSENSKTSSVERKRDVVLFEKRIYLSDCKSGNGRNYRGTLSKTKSGITCQKWSDLSPHVPNYAPSKYPDAGLEKNYCRNPDDDVKGPWCYTTNPDIRYEYCDVPECEDECMHCSGENYRGTISKTESGIECQPWDSQEPHSHEYIPSKFPSKDLKENYCRNPDGEPRPWCFTSNPEKRWEFCNIPRCSSPPPPPGPMLQCLKGRGENYRGKIAVTKSGHTCQRWNKQTPHKHNRTPENFPCRGLDENYCRNPDGELEPWCYTTNPDVRQEYCAIPSCGTSSPHTDRVEQSPVIQECYEGKGENYRGTTSTTISGKKCQAWSSMTPHQHKKTPDNFPNADLIRNYCRNPDGDKSPWCYTMDPTVRWEFCNLEKCSGTGSTVLNAQTTRVPSVDTTSHPESDCMYGSGKDYRGKRSTTVTGTLCQAWTAQEPHRHTIFTPDTYPRAGLEENYCRNPDGDPNGPWCYTTNPKKLFDYCDIPQCVSPSSFDCGKPRVEPQKCPGRIVGGCYAQPHSWPWQISLRTRFGEHFCGGTLIAPQWVLTAAHCLERSQWPGAYKVILGLHREVNPESYSQEIGVSRLFKGPLAADIALLKLNRPAAINDKVIPACLPSQDFMVPDRTLCHVTGWGDTQGTSPRGLLKQASLPVIDNRVCNRHEYLNGRVKSTELCAGHLVGRGDSCQGDSGGPLICFEDDKYVLQGVTSWGLGCARPNKPGVYVRVSRYISWIEDVMKNN')
         else:
-            st.session_state['sequence'] = st.text_input('Enter protein sequence in FASTA format.')
+            st.session_state['sequence'] = st.text_area('Enter protein sequence in FASTA format.')
         st.session_state['name'] = st.session_state['sequence'].split('\n')[0].strip('>')
         st.button('Use example sequence', on_click=click_button)
     else:

run_domain2go_app.py

@@ -15,9 +15,9 @@ def find_domains(email, sequence, name):
     }
 
     data= {
-       'email': email,
-       'stype': 'p',
-       'sequence': f'{sequence}'}
+        'email': email,
+        'stype': 'p',
+        'sequence': f'{sequence}'}
 
 
     job_id_response = requests.post('https://www.ebi.ac.uk/Tools/services/rest/iprscan5/run', headers=headers, data=data)
@@ -95,11 +95,11 @@ def find_domains(email, sequence, name):
 
 
 def merge_locations(locations):
-    temp_locs = [i.split('-') for i in locations]
-    print(temp_locs)
+    temp_locs= [i.split('-') for i in locations]
+    temp_locs = [[int(i[0]), int(i[1])] for i in temp_locs]
     tree = intervaltree.IntervalTree.from_tuples(temp_locs)
     tree.merge_overlaps()
-    merged_locations = ['-'.join([i.begin, i.end]) for i in tree]
+    merged_locations = ['-'.join([str(i.begin), str(i.end)]) for i in tree]
     return merged_locations
     
 def generate_function_predictions(domains_df, mapping_path):