Method,sparse_MF_correlation,sparse_MF_pvalue,sparse_CC_correlation,sparse_CC_pvalue,sparse_BP_correlation,sparse_BP_pvalue,sparse_Ave_correlation,sparse_Ave_pvalue,200_MF_correlation,200_MF_pvalue,200_CC_correlation,200_CC_pvalue,200_BP_correlation,200_BP_pvalue,200_Ave_correlation,200_Ave_pvalue,500_MF_correlation,500_MF_pvalue,500_CC_correlation,500_CC_pvalue,500_BP_correlation,500_BP_pvalue,500_Ave_correlation,500_Ave_pvalue
AAC,-0.0120530487301072,0.8508071436536463,0.0912116785938685,0.1546329908435944,0.2141018739428611,0.0007061795748057,0.0977535012688741,0.3353821046906821,,,,,,,,,,,,,,,,
APAAC,0.1716732195001037,0.0069560423057116,0.240874262539882,0.0001405462274193,0.2735843497262189,1.2923220610249705e-05,0.2287106105887349,0.002369837251247,,,,,,,,,,,,,,,,
LEARNED-VEC,0.4099830116701563,2.1689966436784665e-11,0.3051938408310146,1.120065867436256e-06,0.2987112063885428,1.7495423111940671e-06,0.3379626862965713,9.565432895322534e-07,,,,,,,,,,,,,,,,
PROTVEC,0.1854412229985308,0.0035106737585576,0.2058335849333736,0.0011949062421632,0.2952566916292122,2.329746579400883e-06,0.2288438331870389,0.0015693032491,,,,,,,,,,,,,,,,
K-SEP,0.2222351644321201,0.0004449359524399,0.2943533697632057,2.8912597759133027e-06,0.2924105791926405,2.941553534464349e-06,0.2696663711293221,0.0001502562552501,,,,,,,,,,,,,,,,
MUT2VEC,0.5462247913812742,2.6648168646769584e-20,0.3948878923766817,8.90249286171986e-10,0.5799222876570942,1.1825607450331126e-17,0.50701165713835,2.9674976600808085e-10,,,,,,,,,,,,,,,,
GENE2VEC,0.1756222504801268,0.0057448955732791,0.359607993537279,6.832652069339137e-09,0.407953665862896,2.5324890595081728e-11,0.3143946366267673,0.0019149674770853,,,,,,,,,,,,,,,,
TCGA-EMBEDDING,0.0375448135213401,0.55782521975525,0.5033396964743626,6.003047049037164e-17,0.4822408636127631,8.634372908060867e-16,0.3410417912028219,0.185941739918417,,,,,,,,,,,,,,,,
PFAM,0.3489483982233921,1.877722902620754e-08,0.510730419386372,1.114133339243178e-17,0.422215963284985,4.247926093523296e-12,0.4272982602982497,6.2604923211474655e-09,,,,,,,,,,,,,,,,
CPC-PROT,0.0604542610865414,0.3541297210052825,-0.0869798610000177,0.2340072675203556,0.1090657842339456,0.1042913765903023,0.0275133947734897,0.2308094550386468,,,,,,,,,,,,,,,,
ESM1B,0.384697625027269,8.870758807649626e-10,0.3731936223537567,1.2308236239109248e-07,0.4151856052080267,1.0531459683186124e-10,0.3910256175296842,4.135825095622976e-08,,,,,,,,,,,,,,,,
BERT-BFD,0.2918631086847955,4.893623100352673e-06,0.4157201514424359,2.702080353630567e-09,0.3234845992693526,7.937879082606092e-07,0.3436892864655279,1.8967043629889704e-06,,,,,,,,,,,,,,,,
BERT-PFAM,0.49648612931548936,3.732414283758915e-16,0.2217707389039976,0.002162915012843233,0.20682666170334332,0.0019036632513820377,0.3083611766409434,0.0013555260880752148,,,,,,,,,,,,,,,,