Emaad commited on
Commit
9fbd5c3
·
1 Parent(s): 1d52ab8

Update app.py

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Files changed (1) hide show
  1. app.py +4 -3
app.py CHANGED
@@ -54,17 +54,18 @@ class model:
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  to_tensor = T.ToTensor()
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- nucleus_tensor = to_tensor(nucleus_image)
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  if protein_image:
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- protein_tensor = to_tensor(protein_image)
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- stacked_images = torch.stack([nucleus_tensor, protein_tensor], dim=0)
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  processed_images = process_image(stacked_images, dataset)
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  nucleus_image = processed_images[0].unsqueeze(0)
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  protein_image = processed_images[1].unsqueeze(0)
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  protein_image = protein_image > 0
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  protein_image = 1.0 * protein_image
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  else:
 
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  protein_image = torch.ones((256, 256))
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  threshold, heatmap = run_image_prediction(
 
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  to_tensor = T.ToTensor()
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+ nucleus_image = to_tensor(nucleus_image)
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  if protein_image:
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+ protein_image = to_tensor(protein_image)
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+ stacked_images = torch.stack([nucleus_image, protein_image], dim=0)
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  processed_images = process_image(stacked_images, dataset)
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  nucleus_image = processed_images[0].unsqueeze(0)
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  protein_image = processed_images[1].unsqueeze(0)
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  protein_image = protein_image > 0
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  protein_image = 1.0 * protein_image
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  else:
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+ nucleus_image = process_image(nucleus_image)
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  protein_image = torch.ones((256, 256))
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  threshold, heatmap = run_image_prediction(