MilesCranmer commited on
Commit
0683428
1 Parent(s): bd1838a

Add warning for large numbers of datapoints

Browse files
Files changed (2) hide show
  1. pysr/sr.py +5 -0
  2. setup.py +1 -1
pysr/sr.py CHANGED
@@ -11,6 +11,7 @@ import tempfile
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  import shutil
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  from pathlib import Path
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  from datetime import datetime
 
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  global_equation_file = 'hall_of_fame.csv'
@@ -221,6 +222,10 @@ def pysr(X=None, y=None, weights=None,
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  if use_custom_variable_names:
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  assert len(variable_names) == X.shape[1]
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  if select_k_features is not None:
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  selection = run_feature_selection(X, y, select_k_features)
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  print(f"Using features {selection}")
 
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  import shutil
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  from pathlib import Path
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  from datetime import datetime
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+ import warnings
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  global_equation_file = 'hall_of_fame.csv'
 
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  if use_custom_variable_names:
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  assert len(variable_names) == X.shape[1]
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+
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+ if len(X) > 10000 and not batching:
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+ warnings.warn("Note: you are running with more than 10,000 datapoints. You should consider turning on batching (https://pysr.readthedocs.io/en/latest/docs/options/#batching). You should also reconsider if you need that many datapoints. Unless you have a large amount of noise (in which case you should smooth your dataset first), generally < 10,000 datapoints is enough to find a functional form with symbolic regression. More datapoints will lower the search speed.")
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+
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  if select_k_features is not None:
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  selection = run_feature_selection(X, y, select_k_features)
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  print(f"Using features {selection}")
setup.py CHANGED
@@ -5,7 +5,7 @@ with open("README.md", "r") as fh:
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  setuptools.setup(
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  name="pysr", # Replace with your own username
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- version="0.3.36",
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  author="Miles Cranmer",
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  author_email="miles.cranmer@gmail.com",
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  description="Simple and efficient symbolic regression",
 
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  setuptools.setup(
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  name="pysr", # Replace with your own username
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+ version="0.3.37",
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  author="Miles Cranmer",
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  author_email="miles.cranmer@gmail.com",
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  description="Simple and efficient symbolic regression",