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MilesCranmer
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Commit
β’
e5a9067
1
Parent(s):
117b2c3
Create pretty variable names for print outs
Browse files- pysr/sr.py +37 -31
pysr/sr.py
CHANGED
@@ -633,8 +633,8 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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feature_names_in_ : ndarray of shape (`n_features_in_`,)
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Names of features seen during :term:`fit`. Defined only when `X`
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has feature names that are all strings.
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-
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-
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nout_ : int
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Number of output dimensions.
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selection_mask_ : list[int] of length `select_k_features`
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@@ -997,12 +997,14 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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model.n_features_in_ = n_features_in
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if feature_names_in is None:
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model.feature_names_in_ = [f"x{
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model.
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else:
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assert len(feature_names_in) == n_features_in
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model.feature_names_in_ = feature_names_in
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model.
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if selection_mask is None:
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model.selection_mask_ = np.ones(n_features_in, dtype=bool)
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@@ -1388,17 +1390,17 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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weights = check_array(weights, ensure_2d=False)
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check_consistent_length(weights, y)
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X, y = self._validate_data(X=X, y=y, reset=True, multi_output=True)
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feature_names_in_ = _check_feature_names_in(
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else:
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self.
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self.is_default_feature_names_ = False
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variable_names = self.feature_names_in_
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@@ -1721,7 +1723,11 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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Main.y,
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weights=Main.weights,
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niterations=int(self.niterations),
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variable_names=
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options=options,
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numprocs=cprocs,
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parallelism=parallelism,
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@@ -2098,9 +2104,7 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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with open(filename, "r") as f:
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buf = f.read()
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buf = _preprocess_julia_floats(buf)
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all_outputs = [
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self._postprocess_dataframe(pd.read_csv(StringIO(buf)))
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]
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except FileNotFoundError:
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raise RuntimeError(
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@@ -2118,14 +2122,23 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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},
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)
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# Regexp replace xβββ to x123 in `equation`:
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if self.
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df["equation"] = df["equation"].apply(
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return df
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def get_hof(self):
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"""Get the equations from a hall of fame file.
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@@ -2434,10 +2447,3 @@ def _subscriptify(i: int) -> str:
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For example, 123 -> "βββ".
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"""
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return "".join([chr(0x2080 + int(c)) for c in str(i)])
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def _undo_subscriptify(s: str) -> int:
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"""Converts subscript text form to integer.
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For example, "βββ" -> 123.
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"""
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return int("".join([str(ord(c) - 0x2080) for c in s]))
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feature_names_in_ : ndarray of shape (`n_features_in_`,)
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Names of features seen during :term:`fit`. Defined only when `X`
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has feature names that are all strings.
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+
pretty_feature_names_in_ : ndarray of shape (`n_features_in_`,)
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Pretty names of features, used only during printing.
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nout_ : int
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Number of output dimensions.
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selection_mask_ : list[int] of length `select_k_features`
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model.n_features_in_ = n_features_in
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if feature_names_in is None:
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model.feature_names_in_ = [f"x{i}" for i in range(n_features_in)]
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model.pretty_feature_names_in_ = [
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f"x{_subscriptify(i)}" for i in range(n_features_in)
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]
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else:
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assert len(feature_names_in) == n_features_in
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model.feature_names_in_ = feature_names_in
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model.pretty_feature_names_in_ = None
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if selection_mask is None:
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model.selection_mask_ = np.ones(n_features_in, dtype=bool)
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weights = check_array(weights, ensure_2d=False)
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check_consistent_length(weights, y)
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X, y = self._validate_data(X=X, y=y, reset=True, multi_output=True)
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self.feature_names_in_ = _check_feature_names_in(
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self, variable_names, generate_names=False
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)
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if self.feature_names_in_ is None:
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self.feature_names_in_ = [f"x{i}" for i in range(X.shape[1])]
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self.pretty_feature_names_in_ = [
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f"x{_subscriptify(i)}" for i in range(X.shape[1])
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]
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else:
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self.pretty_feature_names_in_ = None
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variable_names = self.feature_names_in_
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Main.y,
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weights=Main.weights,
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niterations=int(self.niterations),
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variable_names=(
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self.pretty_feature_names_in_
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if self.pretty_feature_names_in_ is not None
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else self.feature_names_in_
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),
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options=options,
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numprocs=cprocs,
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parallelism=parallelism,
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with open(filename, "r") as f:
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buf = f.read()
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buf = _preprocess_julia_floats(buf)
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all_outputs = [self._postprocess_dataframe(pd.read_csv(StringIO(buf)))]
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except FileNotFoundError:
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raise RuntimeError(
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},
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)
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# Regexp replace xβββ to x123 in `equation`:
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if self.pretty_feature_names_in_ is not None:
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# df["equation"] = df["equation"].apply(_undo_subscriptify_full)
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for pname, name in zip(
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self.pretty_feature_names_in_, self.feature_names_in_
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):
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df["equation"] = df["equation"].apply(
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lambda s: re.sub(
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r"\b" + f"({pname})" + r"\b",
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name,
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s,
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)
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if isinstance(s, str)
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else s
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)
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return df
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def get_hof(self):
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"""Get the equations from a hall of fame file.
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For example, 123 -> "βββ".
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"""
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return "".join([chr(0x2080 + int(c)) for c in str(i)])
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