Add application file

environment.yml

@@ -45,7 +45,6 @@ dependencies:
   - exceptiongroup=1.2.0
   - executing=2.0.1
   - expat=2.6.2
-  - fastapi=0.111.0
   - fastapi-cli=0.0.4
   - ffmpeg=7.0.1
   - ffmpy=0.3.0
@@ -67,19 +66,10 @@ dependencies:
   - gettext-tools=0.22.5
   - gmp=6.3.0
   - gnutls=3.7.9
-  - gradio=4.33.0
-  - gradio-client=0.17.0
   - graphite2=1.3.13
   - h11=0.14.0
-  - h2=4.1.0
   - harfbuzz=8.5.0
-  - hpack=4.0.0
-  - httpcore=1.0.5
-  - httpx=0.27.0
-  - huggingface_hub=0.23.2
-  - hyperframe=6.0.1
   - icu=73.2
-  - idna=3.7
   - importlib-metadata=7.1.0
   - importlib-resources=6.4.0
   - importlib_metadata=7.1.0
@@ -192,7 +182,9 @@ dependencies:
   - orjson=3.10.3
   - overrides=7.7.0
   - p11-kit=0.24.1
-  - pandoc=3.2
+  - packaging=24.1
+  - pandas=2.2.3
+  - pandoc=3.2.1
   - pandocfilters=1.5.0
   - parso=0.8.4
   - patsy=0.5.6
@@ -213,6 +205,8 @@ dependencies:
   - pugixml=1.14
   - pure_eval=0.2.2
   - pycparser=2.22
+  - pydantic=2.9.2
+  - pydantic-core=2.23.4
   - pydub=0.25.1
   - pygments=2.18.0
   - pyobjc-core=10.2
@@ -220,6 +214,7 @@ dependencies:
   - pyparsing=3.1.2
   - pysocks=1.7.1
   - python=3.12.3
+  - python-dateutil=2.9.0
   - python-fastjsonschema=2.19.1
   - python-json-logger=2.0.7
   - python-multipart=0.0.9
@@ -251,7 +246,6 @@ dependencies:
   - sniffio=1.3.1
   - soupsieve=2.5
   - stack_data=0.6.2
-  - starlette=0.37.2
   - statsmodels=0.14.2
   - svt-av1=2.1.0
   - tbb=2021.12.0
@@ -262,7 +256,7 @@ dependencies:
   - tomli=2.0.1
   - tomlkit=0.12.0
   - toolz=0.12.1
-  - tornado=6.4
+  - tornado=6.4.1
   - tqdm=4.66.4
   - traitlets=5.14.3
   - typer=0.12.3
@@ -298,134 +292,100 @@ dependencies:
   - zlib=1.3.1
   - zstd=1.5.6
   - pip:
-      - aiohttp==3.9.5
-      - aioitertools==0.12.0
+      - aiohappyeyeballs==2.4.3
+      - aiohttp==3.10.9
       - aiosignal==1.3.1
-      - aiosmtplib==2.0.2
-      - aiosqlite==0.20.0
-      - alembic==1.13.3
-      - anthropic==0.34.2
-      - arize-phoenix==5.1.2
-      - arize-phoenix-evals==0.16.1
-      - arize-phoenix-otel==0.5.1
       - asgiref==3.8.1
-      - astor==0.8.1
-      - authlib==1.3.2
-      - azure-core==1.31.0
-      - azure-identity==1.17.1
       - backoff==2.2.1
       - bcrypt==4.2.0
       - bio==1.7.1
-      - biopython==1.83
+      - biopython==1.84
       - biothings-client==0.3.1
-      - boto3==1.35.18
-      - botocore==1.35.18
-      - build==1.2.2
+      - build==1.2.2.post1
       - cachetools==5.5.0
+      - chardet==3.0.4
       - chroma-hnswlib==0.7.6
       - chromadb==0.5.11
-      - cohere==5.9.1
       - coloredlogs==15.0.1
-      - cryptography==43.0.1
-      - dataclasses-json==0.6.6
+      - dataclasses-json==0.6.7
       - deprecated==1.2.14
       - dirtyjson==1.0.8
       - diskcache==5.6.3
       - distro==1.9.0
-      - duckdb==1.1.1
-      - duckduckgo-search==6.2.13
       - durationpy==0.9
-      - faker==19.13.0
-      - fastapi-mail==1.4.1
-      - fastavro==1.9.7
+      - fastapi==0.115.3
       - flatbuffers==24.3.25
       - frozenlist==1.4.1
       - google-auth==2.35.0
-      - google-search-results==2.4.2
       - googleapis-common-protos==1.65.0
+      - googletrans==3.1.0a0
       - gprofiler-official==1.0.0
-      - graphql-core==3.2.4
-      - greenlet==3.0.3
+      - gradio==5.3.0
+      - gradio-client==1.4.2
+      - greenlet==3.1.1
       - groq==0.11.0
-      - grpc-interceptor==0.15.4
       - grpcio==1.66.2
-      - grpcio-tools==1.66.2
-      - hdbscan==0.8.38.post1
+      - h2==3.2.0
+      - hpack==3.0.0
+      - hstspreload==2024.10.1
+      - httpcore==1.0.6
       - httptools==0.6.1
-      - httpx-sse==0.4.0
+      - httpx==0.27.2
+      - huggingface-hub==0.26.1
       - humanfriendly==10.0
+      - hyperframe==5.2.0
+      - idna==2.10
+      - inquirerpy==0.3.4
       - jiter==0.5.0
-      - jmespath==1.0.1
       - jsonpatch==1.33
-      - jsonpath-python==1.0.6
       - kubernetes==31.0.0
-      - langchain==0.3.1
-      - langchain-anthropic==0.2.1
+      - langchain==0.3.2
       - langchain-community==0.3.1
       - langchain-core==0.3.9
-      - langchain-experimental==0.0.60
+      - langchain-experimental==0.3.2
       - langchain-groq==0.2.0
       - langchain-openai==0.2.2
       - langchain-text-splitters==0.3.0
+      - langchainhub==0.1.21
       - langgraph==0.2.34
-      - langgraph-checkpoint==2.0.0
-      - langsmith==0.1.130
-      - llama-cloud==0.1.0
-      - llama-cpp-python==0.2.77
-      - llama-index==0.11.14
+      - langgraph-checkpoint==2.0.1
+      - langsmith==0.1.131
+      - llama-cloud==0.1.4
+      - llama-cpp-python==0.2.90
+      - llama-index==0.11.20
       - llama-index-agent-openai==0.3.4
-      - llama-index-callbacks-arize-phoenix==0.2.1
       - llama-index-cli==0.3.1
-      - llama-index-core==0.11.14
-      - llama-index-embeddings-adapter==0.2.1
+      - llama-index-core==0.11.20
       - llama-index-embeddings-openai==0.2.5
-      - llama-index-experimental==0.3.1
-      - llama-index-finetuning==0.2.0
       - llama-index-indices-managed-llama-cloud==0.4.0
-      - llama-index-legacy==0.9.48
-      - llama-index-llms-azure-openai==0.2.1
+      - llama-index-legacy==0.9.48.post3
       - llama-index-llms-groq==0.2.0
-      - llama-index-llms-llama-cpp==0.1.3
-      - llama-index-llms-mistralai==0.2.3
-      - llama-index-llms-openai==0.2.9
+      - llama-index-llms-llama-cpp==0.2.3
+      - llama-index-llms-openai==0.2.16
       - llama-index-llms-openai-like==0.2.0
-      - llama-index-llms-replicate==0.1.3
-      - llama-index-multi-modal-llms-openai==0.2.1
-      - llama-index-postprocessor-cohere-rerank==0.2.0
+      - llama-index-multi-modal-llms-openai==0.2.3
       - llama-index-program-openai==0.2.0
       - llama-index-question-gen-openai==0.2.0
       - llama-index-readers-file==0.2.2
       - llama-index-readers-llama-parse==0.3.0
-      - llama-parse==0.5.6
+      - llama-parse==0.5.12
       - llamaindex-py-client==0.1.19
-      - llvmlite==0.43.0
-      - mako==1.3.5
-      - marshmallow==3.21.2
-      - mistralai==1.0.3
+      - marshmallow==3.22.0
       - mmh3==5.0.1
       - monotonic==1.6
       - mpmath==1.3.0
-      - msal==1.31.0
-      - msal-extensions==1.2.0
       - msgpack==1.1.0
-      - multidict==6.0.5
+      - multidict==6.1.0
       - mygene==3.2.2
       - mypy-extensions==1.0.0
       - networkx==3.3
       - nltk==3.9.1
-      - numba==0.60.0
-      - numexpr==2.10.1
       - oauthlib==3.2.2
       - onnxruntime==1.19.2
       - openai==1.51.0
-      - openinference-instrumentation==0.1.18
-      - openinference-instrumentation-llama-index==3.0.2
-      - openinference-semantic-conventions==0.1.10
       - opentelemetry-api==1.27.0
-      - opentelemetry-exporter-otlp==1.27.0
       - opentelemetry-exporter-otlp-proto-common==1.27.0
       - opentelemetry-exporter-otlp-proto-grpc==1.27.0
-      - opentelemetry-exporter-otlp-proto-http==1.27.0
       - opentelemetry-instrumentation==0.48b0
       - opentelemetry-instrumentation-asgi==0.48b0
       - opentelemetry-instrumentation-fastapi==0.48b0
@@ -433,55 +393,45 @@ dependencies:
       - opentelemetry-sdk==1.27.0
       - opentelemetry-semantic-conventions==0.48b0
       - opentelemetry-util-http==0.48b0
-      - packaging==23.2
-      - pandas==1.5.3
-      - pandasai==2.2.15
-      - parameterized==0.9.0
-      - pooch==1.8.1
-      - portalocker==2.10.1
+      - outcome==1.3.0.post0
+      - pfzy==0.3.4
+      - pooch==1.8.2
       - posthog==3.7.0
-      - primp==0.6.3
       - protobuf==4.25.5
-      - pyarrow==17.0.0
       - pyasn1==0.6.1
       - pyasn1-modules==0.4.1
-      - pydantic==2.9.2
-      - pydantic-core==2.23.4
       - pydantic-settings==2.5.2
-      - pyjwt==2.9.0
-      - pynndescent==0.5.13
-      - pypdf==4.2.0
+      - pypdf==4.3.1
       - pypika==0.48.9
       - pyproject-hooks==1.2.0
-      - python-dateutil==2.9.0.post0
       - python-dotenv==1.0.1
-      - pytrials==1.0.0
-      - qdrant-client==1.11.3
-      - regex==2024.5.15
-      - replicate==0.26.0
+      - regex==2024.9.11
       - requests-oauthlib==2.0.0
       - requests-toolbelt==1.0.0
+      - rfc3986==1.5.0
       - rsa==4.9
-      - s3transfer==0.10.2
-      - safetensors==0.4.3
-      - sentence-transformers==2.7.0
-      - sqlalchemy==2.0.30
-      - sqlean-py==3.45.1
-      - sqlglot==25.24.3
-      - sqlglotrs==0.2.12
-      - strawberry-graphql==0.236.0
+      - safetensors==0.4.5
+      - selenium==4.27.0
+      - sentence-transformers==3.1.1
+      - sortedcontainers==2.4.0
+      - sqlalchemy==2.0.35
+      - starlette==0.41.0
       - striprtf==0.0.26
-      - sympy==1.13.2
-      - tenacity==8.3.0
-      - tiktoken==0.7.0
-      - tokenizers==0.19.1
+      - sympy==1.13.3
+      - tavily-python==0.5.0
+      - tenacity==8.5.0
+      - tiktoken==0.8.0
+      - tokenizers==0.20.0
       - torch==2.4.1
-      - transformers==4.41.2
-      - types-requests==2.32.0.20240907
+      - transformers==4.45.1
+      - trio==0.27.0
+      - trio-websocket==0.11.1
+      - types-requests==2.32.0.20240914
       - typing-inspect==0.9.0
-      - umap-learn==0.5.6
       - uvloop==0.20.0
       - watchfiles==0.24.0
+      - webdriver-manager==4.0.2
       - wrapt==1.16.0
-      - yarl==1.9.4
+      - wsproto==1.2.0
+      - yarl==1.13.1
 prefix: /Users/satoc/miniforge3/envs/gradio

requirements.txt

@@ -60,6 +60,8 @@ pytrials==1.0.0
 regex==2024.5.15
 replicate==0.26.0
 safetensors
+selenium==4.27.0
+sentence-transformers==3.1.1
 setuptools==70.0.0
 SQLAlchemy==2.0.30
 striprtf==0.0.26