MultiMed / app.py
not-lain's picture
Merge branch 'main' of https://huggingface.co/spaces/TeamTonic/MultiMed
c14b293
raw
history blame
11.7 kB
# Welcome to Team Tonic's MultiMed
import numpy as np
import os
import torch
import torchaudio
import gradio as gr
import requests
import json
import dotenv
from transformers import AutoProcessor, SeamlessM4TModel
from lang_list import (
LANGUAGE_NAME_TO_CODE,
S2ST_TARGET_LANGUAGE_NAMES,
S2TT_TARGET_LANGUAGE_NAMES,
T2TT_TARGET_LANGUAGE_NAMES,
TEXT_SOURCE_LANGUAGE_NAMES,
LANG_TO_SPKR_ID,
)
dotenv.load_dotenv()
DEFAULT_TARGET_LANGUAGE = "English"
AUDIO_SAMPLE_RATE = 16000.0
MAX_INPUT_AUDIO_LENGTH = 60 # in seconds
def predict(
task_name: str,
audio_source: str,
input_audio_mic: str | None,
input_audio_file: str | None,
input_text: str | None,
source_language: str | None,
target_language: str,
) -> tuple[tuple[int, np.ndarray] | None, str]:
task_name = task_name.split()[0]
source_language_code = LANGUAGE_NAME_TO_CODE[source_language] if source_language else None
target_language_code = LANGUAGE_NAME_TO_CODE[target_language]
if task_name in ["S2ST", "S2TT", "ASR"]:
if audio_source == "microphone":
input_data = input_audio_mic
else:
input_data = input_audio_file
arr, org_sr = torchaudio.load(input_data)
new_arr = torchaudio.functional.resample(arr, orig_freq=org_sr, new_freq=AUDIO_SAMPLE_RATE)
max_length = int(MAX_INPUT_AUDIO_LENGTH * AUDIO_SAMPLE_RATE)
if new_arr.shape[1] > max_length:
new_arr = new_arr[:, :max_length]
gr.Warning(f"Input audio is too long. Only the first {MAX_INPUT_AUDIO_LENGTH} seconds is used.")
input_data = processor(audios = new_arr, sampling_rate=AUDIO_SAMPLE_RATE, return_tensors="pt").to(device)
else:
input_data = processor(text = input_text, src_lang=source_language_code, return_tensors="pt").to(device)
if task_name in ["S2TT", "T2TT"]:
tokens_ids = model.generate(**input_data, generate_speech=False, tgt_lang=target_language_code, num_beams=5, do_sample=True)[0].cpu().squeeze().detach().tolist()
else:
output = model.generate(**input_data, return_intermediate_token_ids=True, tgt_lang=target_language_code, num_beams=5, do_sample=True, spkr_id=LANG_TO_SPKR_ID[target_language_code][0])
waveform = output.waveform.cpu().squeeze().detach().numpy()
tokens_ids = output.sequences.cpu().squeeze().detach().tolist()
text_out = processor.decode(tokens_ids, skip_special_tokens=True)
if task_name in ["S2ST", "T2ST"]:
return (AUDIO_SAMPLE_RATE, waveform), text_out
else:
return None, text_out
def process_image_with_openai(image):
image_data = convert_image_to_required_format(image)
openai_api_key = os.getenv('OPENAI_API_KEY') # Make sure to have this in your .env file
data_payload = {
"model": "gpt-4-vision-preview",
"messages": [
{
"role": "user",
"content": image_data
}
],
"max_tokens": 300
}
response = requests.post(
"https://api.openai.com/v1/chat/completions",
headers={
"Content-Type": "application/json",
"Authorization": f"Bearer {openai_api_key}"
},
json=data_payload
)
if response.status_code == 200:
return response.json()['choices'][0]['message']['content']
else:
raise Exception(f"OpenAI Error: {response.status_code}")
def query_vectara(text):
user_message = text
# Read authentication parameters from the .env file
CUSTOMER_ID = os.getenv('CUSTOMER_ID')
CORPUS_ID = os.getenv('CORPUS_ID')
API_KEY = os.getenv('API_KEY')
# Define the headers
api_key_header = {
"customer-id": CUSTOMER_ID,
"x-api-key": API_KEY
}
# Define the request body in the structure provided in the example
request_body = {
"query": [
{
"query": user_message,
"queryContext": "",
"start": 1,
"numResults": 50,
"contextConfig": {
"charsBefore": 0,
"charsAfter": 0,
"sentencesBefore": 2,
"sentencesAfter": 2,
"startTag": "%START_SNIPPET%",
"endTag": "%END_SNIPPET%",
},
"rerankingConfig": {
"rerankerId": 272725718,
"mmrConfig": {
"diversityBias": 0.35
}
},
"corpusKey": [
{
"customerId": CUSTOMER_ID,
"corpusId": CORPUS_ID,
"semantics": 0,
"metadataFilter": "",
"lexicalInterpolationConfig": {
"lambda": 0
},
"dim": []
}
],
"summary": [
{
"maxSummarizedResults": 5,
"responseLang": "auto",
"summarizerPromptName": "vectara-summary-ext-v1.2.0"
}
]
}
]
}
# Make the API request using Gradio
response = requests.post(
"https://api.vectara.io/v1/query",
json=request_body, # Use json to automatically serialize the request body
verify=True,
headers=api_key_header
)
if response.status_code == 200:
query_data = response.json()
if query_data:
sources_info = []
# Extract the summary.
summary = query_data['responseSet'][0]['summary'][0]['text']
# Iterate over all response sets
for response_set in query_data.get('responseSet', []):
# Extract sources
for source in response_set.get('response', [])[:5]: # Limit to top 5 sources.
source_metadata = source.get('metadata', [])
source_info = {}
for metadata in source_metadata:
metadata_name = metadata.get('name', '')
metadata_value = metadata.get('value', '')
if metadata_name == 'title':
source_info['title'] = metadata_value
elif metadata_name == 'author':
source_info['author'] = metadata_value
elif metadata_name == 'pageNumber':
source_info['page number'] = metadata_value
if source_info:
sources_info.append(source_info)
result = {"summary": summary, "sources": sources_info}
return f"{json.dumps(result, indent=2)}"
else:
return "No data found in the response."
else:
return f"Error: {response.status_code}"
def convert_to_markdown(vectara_response_json):
vectara_response = json.loads(vectara_response_json)
if vectara_response:
summary = vectara_response.get('summary', 'No summary available')
sources_info = vectara_response.get('sources', [])
# Format the summary as Markdown
markdown_summary = f'**Summary:** {summary}\n\n'
# Format the sources as a numbered list
markdown_sources = ""
for i, source_info in enumerate(sources_info):
author = source_info.get('author', 'Unknown author')
title = source_info.get('title', 'Unknown title')
page_number = source_info.get('page number', 'Unknown page number')
markdown_sources += f"{i+1}. {title} by {author}, Page {page_number}\n"
return f"{markdown_summary}**Sources:**\n{markdown_sources}"
else:
return "No data found in the response."
# Main function to handle the Gradio interface logic
def process_and_query(text, image):
try:
# If an image is provided, process it with OpenAI and use the response as the text query for Vectara
if image is not None:
text = process_image_with_openai(image)
# Now, use the text (either provided by the user or obtained from OpenAI) to query Vectara
vectara_response_json = query_vectara(text)
markdown_output = convert_to_markdown(vectara_response_json)
return markdown_output
except Exception as e:
return str(e)
# Define the Gradio interface
iface = gr.Interface(
fn=process_and_query,
inputs=[
gr.Textbox(label="Input Text"),
gr.Image(label="Upload Image")
],
outputs=[gr.Markdown(label="Output Text")],
title="👋🏻Welcome to ⚕🗣️😷MultiMed - Access Chat ⚕🗣️😷",
description = '''
### How To Use ⚕🗣️😷MultiMed⚕:
#### 🗣️📝Interact with ⚕🗣️😷MultiMed⚕ in any language using audio or text!
#### 🗣️📝 This is an educational and accessible conversational tool to improve wellness and sanitation in support of public health.
#### 📚🌟💼 The knowledge base is composed of publicly available medical and health sources in multiple languages. We also used [Kelvalya/MedAware](https://huggingface.co/datasets/keivalya/MedQuad-MedicalQnADataset) that we processed and converted to HTML. The quality of the answers depends on the quality of the dataset, so if you want to see some data represented here, do [get in touch](https://discord.gg/GWpVpekp). You can also use 😷MultiMed⚕️ on your own data & in your own way by cloning this space. 🧬🔬🔍 Simply click here: <a style="display:inline-block" href="https://huggingface.co/spaces/TeamTonic/MultiMed?duplicate=true"><img src="https://img.shields.io/badge/-Duplicate%20Space-blue?labelColor=white&style=flat&logo=data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAAXNSR0IArs4c6QAAAP5JREFUOE+lk7FqAkEURY+ltunEgFXS2sZGIbXfEPdLlnxJyDdYB62sbbUKpLbVNhyYFzbrrA74YJlh9r079973psed0cvUD4A+4HoCjsA85X0Dfn/RBLBgBDxnQPfAEJgBY+A9gALA4tcbamSzS4xq4FOQAJgCDwV2CPKV8tZAJcAjMMkUe1vX+U+SMhfAJEHasQIWmXNN3abzDwHUrgcRGmYcgKe0bxrblHEB4E/pndMazNpSZGcsZdBlYJcEL9Afo75molJyM2FxmPgmgPqlWNLGfwZGG6UiyEvLzHYDmoPkDDiNm9JR9uboiONcBXrpY1qmgs21x1QwyZcpvxt9NS09PlsPAAAAAElFTkSuQmCC&logoWidth=14" alt="Duplicate Space"></a></h3>
#### Join us : 🌟TeamTonic🌟 is always making cool demos! Join our active builder's🛠️community on 👻Discord: [Discord](https://discord.gg/GWpVpekp) On 🤗Huggingface: [TeamTonic](https://huggingface.co/TeamTonic) & [MultiTransformer](https://huggingface.co/MultiTransformer) On 🌐Github: [Polytonic](https://github.com/tonic-ai) & contribute to 🌟 [PolyGPT](https://github.com/tonic-ai/polygpt-alpha)"
''',
theme='ParityError/Anime',
examples=[
["What is the proper treatment for buccal herpes?"],
["Male, 40 presenting with swollen glands and a rash"],
["How does cellular metabolism work TCA cycle"],
["What special care must be provided to children with chicken pox?"],
["When and how often should I wash my hands ?"],
["بکل ہرپس کا صحیح علاج کیا ہے؟"],
["구강 헤르페스의 적절한 치료법은 무엇입니까?"],
["Je, ni matibabu gani sahihi kwa herpes ya buccal?"],
],
)
iface.launch()