import gradio as gr from unstructured.partition.pdf import partition_pdf import pymupdf from PIL import Image import numpy as np import io import pandas as pd from langchain.text_splitter import RecursiveCharacterTextSplitter import gc import torch import chromadb from chromadb.utils.embedding_functions import OpenCLIPEmbeddingFunction from chromadb.utils.data_loaders import ImageLoader from sentence_transformers import SentenceTransformer from chromadb.utils import embedding_functions from transformers import LlavaNextProcessor, LlavaNextForConditionalGeneration import base64 from langchain_community.llms import HuggingFaceEndpoint from langchain import PromptTemplate import spaces if torch.cuda.is_available(): processor = LlavaNextProcessor.from_pretrained("llava-hf/llava-v1.6-mistral-7b-hf") vision_model = LlavaNextForConditionalGeneration.from_pretrained( "llava-hf/llava-v1.6-mistral-7b-hf", torch_dtype=torch.float16, low_cpu_mem_usage=True, load_in_4bit=True, ) def image_to_bytes(image): img_byte_arr = io.BytesIO() image.save(img_byte_arr, format="PNG") return base64.b64encode(img_byte_arr.getvalue()).decode("utf-8") @spaces.GPU(duration=60*4) def get_image_descriptions(images): torch.cuda.empty_cache() gc.collect() descriptions = [] prompt = "[INST] \nDescribe the image in a sentence [/INST]" for img in images: inputs = processor(prompt, img, return_tensors="pt").to("cuda:0") output = vision_model.generate(**inputs, max_new_tokens=100) descriptions.append(processor.decode(output[0], skip_special_tokens=True)) return descriptions CSS = """ #table_col {background-color: rgb(33, 41, 54);} """ def extract_pdfs(docs, doc_collection): if docs: doc_collection = [] doc_collection.extend(docs) return ( doc_collection, gr.Tabs(selected=1), pd.DataFrame([i.split("/")[-1] for i in list(docs)], columns=["Filename"]), ) def extract_images(docs): images = [] for doc_path in docs: doc = pymupdf.open(doc_path) # open a document for page_index in range(len(doc)): # iterate over pdf pages page = doc[page_index] # get the page image_list = page.get_images() for image_index, img in enumerate( image_list, start=1 ): # enumerate the image list xref = img[0] # get the XREF of the image pix = pymupdf.Pixmap(doc, xref) # create a Pixmap if pix.n - pix.alpha > 3: # CMYK: convert to RGB first pix = pymupdf.Pixmap(pymupdf.csRGB, pix) images.append(Image.open(io.BytesIO(pix.pil_tobytes("JPEG")))) return images # def get_vectordb(text, images, tables): def get_vectordb(text, images): client = chromadb.EphemeralClient() loader = ImageLoader() sentence_transformer_ef = embedding_functions.SentenceTransformerEmbeddingFunction( model_name="multi-qa-mpnet-base-dot-v1" ) if "text_db" in [i.name for i in client.list_collections()]: client.delete_collection("text_db") if "image_db" in [i.name for i in client.list_collections()]: client.delete_collection("image_db") text_collection = client.get_or_create_collection( name="text_db", embedding_function=sentence_transformer_ef, data_loader=loader, ) image_collection = client.get_or_create_collection( name="image_db", embedding_function=sentence_transformer_ef, data_loader=loader, metadata={"hnsw:space": "cosine"}, ) image_descriptions = get_image_descriptions(images) image_dict = [{"image": image_to_bytes(img) for img in images}] if len(images)>0: image_collection.add( ids=[str(i) for i in range(len(images))], documents=image_descriptions, metadatas=image_dict, ) splitter = RecursiveCharacterTextSplitter( chunk_size=500, chunk_overlap=10, ) if len(text)>0: docs = splitter.create_documents([text]) doc_texts = [i.page_content for i in docs] text_collection.add( ids=[str(i) for i in list(range(len(doc_texts)))], documents=doc_texts ) return client def extract_data_from_pdfs(docs, session, progress=gr.Progress()): if len(docs) == 0: raise gr.Error("No documents to process") progress(0, "Extracting Images") images = extract_images(docs) progress(0.25, "Extracting Text") strategy = "hi_res" model_name = "yolox" all_elements = [] for doc in docs: elements = partition_pdf( filename=doc, strategy=strategy, infer_table_structure=True, model_name=model_name, ) all_elements.extend(elements) all_text = "" # tables = [] prev = None for i in all_elements: meta = i.to_dict() if meta["type"].lower() not in ["table", "figurecaption"]: if meta["type"].lower() in ["listitem", "title"]: all_text += "\n\n" + meta["text"] + "\n" else: all_text += meta["text"] elif meta["type"] == "Table": continue # tables.append(meta["metadata"]["text_as_html"]) # html = "
".join(tables) # display = "

Sample Tables

" + "
".join(tables[:2]) # html = gr.HTML(html) # vectordb = get_vectordb(all_text, images, tables) progress(0.5, "Generating image descriptions") image_descriptions = "\n".join(get_image_descriptions(images)) progress(0.75, "Inserting data into vector database") vectordb = get_vectordb(all_text, images) progress(1, "Completed") session["processed"] = True return ( vectordb, session, gr.Row(visible=True), all_text[:2000] + "...", # display, images[:2], "

Completed

", # image_descriptions ) sentence_transformer_ef = embedding_functions.SentenceTransformerEmbeddingFunction( model_name="multi-qa-mpnet-base-dot-v1" ) def conversation(vectordb_client, msg, num_context, img_context, history): text_collection = vectordb_client.get_collection( "text_db", embedding_function=sentence_transformer_ef ) image_collection = vectordb_client.get_collection( "image_db", embedding_function=sentence_transformer_ef ) results = text_collection.query( query_texts=[msg], include=["documents"], n_results=num_context )["documents"][0] # print(results) # print("R"*100) similar_images = image_collection.query( query_texts=[msg], include=["metadatas", "distances", "documents"], n_results=img_context, ) img_links = [i["image"] for i in similar_images["metadatas"][0]] images_and_locs = [ Image.open(io.BytesIO(base64.b64decode(i[1]))) for i in zip(similar_images["distances"][0], img_links) ] img_desc = "\n".join(similar_images["documents"][0]) if len(img_links) == 0: img_desc = "No Images Are Provided" template = """ Context: {context} Included Images: {images} Question: {question} Answer: """ prompt = PromptTemplate(template=template, input_variables=["context", "question"]) context = "\n\n".join(results) # references = [gr.Textbox(i, visible=True, interactive=False) for i in results] response = llm(prompt.format(context=context, question=msg, images=img_desc)) return history + [(msg, response)], results, images_and_locs def check_validity_and_llm(session_states): if session_states.get("processed", False) == True: return gr.Tabs(selected=2) raise gr.Error("Please extract data first") def get_stats(vectordb): eles = vectordb.get() # words = text_data = [f"Chunks: {len(eles)}", "HIII"] return "\n".join(text_data), "", "" llm = HuggingFaceEndpoint( repo_id="mistralai/Mixtral-8x7B-Instruct-v0.1", temperature=0.4, max_new_tokens=800, ) with gr.Blocks(css=CSS, theme=gr.themes.Soft()) as demo: vectordb = gr.State() doc_collection = gr.State(value=[]) session_states = gr.State(value={}) references = gr.State(value=[]) gr.Markdown( """

Multimodal PDF Chatbot

Interact With Your PDF Documents

""" ) gr.Markdown( """

Note: This application leverages advanced Retrieval-Augmented Generation (RAG) techniques to provide context-aware responses from your PDF documents


Utilizing multimodal capabilities, this chatbot can interpret and answer queries based on both textual and visual information within your PDFs.
""" ) gr.Markdown( """
Warning: Extracting text and images from your document and generating embeddings may take some time due to the use of OCR and multimodal LLMs for image description
""" ) with gr.Tabs() as tabs: with gr.TabItem("Upload PDFs", id=0) as pdf_tab: with gr.Row(): with gr.Column(): documents = gr.File( file_count="multiple", file_types=["pdf"], interactive=True, label="Upload your PDF file/s", ) pdf_btn = gr.Button(value="Next", elem_id="button1") with gr.TabItem("Extract Data", id=1) as preprocess: with gr.Row(): with gr.Column(): back_p1 = gr.Button(value="Back") with gr.Column(): embed = gr.Button(value="Extract Data") with gr.Column(): next_p1 = gr.Button(value="Next") with gr.Row() as row: with gr.Column(): selected = gr.Dataframe( interactive=False, col_count=(1, "fixed"), headers=["Selected Files"], ) with gr.Column(variant="panel"): prog = gr.HTML( value="

Click the 'Extract' button to extract data from PDFs

" ) with gr.Accordion("See Parts of Extracted Data", open=False): with gr.Column(visible=True) as sample_data: with gr.Row(): with gr.Column(): ext_text = gr.Textbox( label="Sample Extracted Text", lines=15 ) with gr.Column(): images = gr.Gallery( label="Sample Extracted Images", columns=1, rows=2 ) with gr.TabItem("Chat", id=2) as chat_tab: with gr.Column(): choice = gr.Radio( ["chromaDB"], value="chromaDB", label="Vector Database", interactive=True, ) num_context = gr.Slider( label="Number of text context elements", minimum=1, maximum=20, step=1, interactive=True, value=3, ) img_context = gr.Slider( label="Number of image context elements", minimum=1, maximum=10, step=1, interactive=True, value=2, ) with gr.Row(): with gr.Column(): ret_images = gr.Gallery("Similar Images", columns=1, rows=2) with gr.Column(): chatbot = gr.Chatbot(height=400) with gr.Accordion("Text References", open=False): # text_context = gr.Row() @gr.render(inputs=references) def gen_refs(references): # print(references) n = len(references) for i in range(n): gr.Textbox(label=f"Reference-{i+1}", value=references[i], lines=3) with gr.Row(): msg = gr.Textbox( placeholder="Type your question here (e.g. 'What is this document about?')", interactive=True, container=True, ) with gr.Row(): submit_btn = gr.Button("Submit message") clear_btn = gr.ClearButton([msg, chatbot], value="Clear conversation") pdf_btn.click( fn=extract_pdfs, inputs=[documents, doc_collection], outputs=[doc_collection, tabs, selected], ) embed.click( extract_data_from_pdfs, inputs=[doc_collection, session_states], outputs=[ vectordb, session_states, sample_data, ext_text, images, prog, ], ) submit_btn.click( conversation, [vectordb, msg, num_context, img_context, chatbot], [chatbot,references ,ret_images], ) back_p1.click(lambda: gr.Tabs(selected=0), None, tabs) next_p1.click(check_validity_and_llm, session_states, tabs) if __name__ == "__main__": demo.launch()