Spaces:
Sleeping
Sleeping
reinitialize importance scores
Browse files
app.py
CHANGED
@@ -379,9 +379,6 @@ def generate_heatmap(protein_fasta):
|
|
379 |
original_output = model(encoded_input["input_ids"], attention_mask=encoded_input["attention_mask"])
|
380 |
original_probabilities = F.softmax(original_output.logits, dim=1).cpu().numpy()[0]
|
381 |
|
382 |
-
# Initialize an array to hold the importance scores
|
383 |
-
importance_scores = np.zeros((len(protein_sequence), len(original_probabilities)))
|
384 |
-
|
385 |
# Define the size of each group
|
386 |
group_size = 10 # You can change this
|
387 |
|
@@ -440,7 +437,7 @@ with gr.Blocks() as app:
|
|
440 |
with gr.Tab("Single Sequence Prediction"):
|
441 |
with gr.Row().style(equal_height=True):
|
442 |
with gr.Column():
|
443 |
-
sequence = gr.inputs.Textbox(lines=
|
444 |
with gr.Column():
|
445 |
with gr.Accordion("Example:"):
|
446 |
gr.Markdown("""
|
|
|
379 |
original_output = model(encoded_input["input_ids"], attention_mask=encoded_input["attention_mask"])
|
380 |
original_probabilities = F.softmax(original_output.logits, dim=1).cpu().numpy()[0]
|
381 |
|
|
|
|
|
|
|
382 |
# Define the size of each group
|
383 |
group_size = 10 # You can change this
|
384 |
|
|
|
437 |
with gr.Tab("Single Sequence Prediction"):
|
438 |
with gr.Row().style(equal_height=True):
|
439 |
with gr.Column():
|
440 |
+
sequence = gr.inputs.Textbox(lines=16, placeholder='Enter Protein Sequence Here...', label="Protein Sequence")
|
441 |
with gr.Column():
|
442 |
with gr.Accordion("Example:"):
|
443 |
gr.Markdown("""
|