arikat commited on
Commit
ca7782f
1 Parent(s): 27104d6

reinitialize importance scores

Browse files
Files changed (1) hide show
  1. app.py +1 -4
app.py CHANGED
@@ -379,9 +379,6 @@ def generate_heatmap(protein_fasta):
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  original_output = model(encoded_input["input_ids"], attention_mask=encoded_input["attention_mask"])
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  original_probabilities = F.softmax(original_output.logits, dim=1).cpu().numpy()[0]
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- # Initialize an array to hold the importance scores
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- importance_scores = np.zeros((len(protein_sequence), len(original_probabilities)))
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-
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  # Define the size of each group
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  group_size = 10 # You can change this
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@@ -440,7 +437,7 @@ with gr.Blocks() as app:
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  with gr.Tab("Single Sequence Prediction"):
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  with gr.Row().style(equal_height=True):
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  with gr.Column():
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- sequence = gr.inputs.Textbox(lines=15, placeholder='Enter Protein Sequence Here...', label="Protein Sequence")
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  with gr.Column():
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  with gr.Accordion("Example:"):
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  gr.Markdown("""
 
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  original_output = model(encoded_input["input_ids"], attention_mask=encoded_input["attention_mask"])
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  original_probabilities = F.softmax(original_output.logits, dim=1).cpu().numpy()[0]
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  # Define the size of each group
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  group_size = 10 # You can change this
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  with gr.Tab("Single Sequence Prediction"):
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  with gr.Row().style(equal_height=True):
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  with gr.Column():
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+ sequence = gr.inputs.Textbox(lines=16, placeholder='Enter Protein Sequence Here...', label="Protein Sequence")
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  with gr.Column():
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  with gr.Accordion("Example:"):
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  gr.Markdown("""