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Refactor ISCO_Hierarchical_Accuracy class to improve code readability and add input validation
Browse files- isco_hierarchical_accuracy.py +37 -24
isco_hierarchical_accuracy.py
CHANGED
@@ -16,9 +16,7 @@
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from typing import List, Set, Dict, Tuple
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import evaluate
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import datasets
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# import ham
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# import isco
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# TODO: Add BibTeX citation
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@@ -264,40 +262,55 @@ class ISCO_Hierarchical_Accuracy(evaluate.Metric):
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print("Weighted ISCO hierarchy dictionary created as isco_hierarchy")
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# print(self.isco_hierarchy)
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#
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def
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#
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def _compute(self, predictions, references):
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"""
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predictions = [str(p) for p in predictions]
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references = [str(r) for r in references]
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# Calculate accuracy
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accuracy = sum(i == j for i, j in zip(predictions, references)) / len(
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predictions
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# Calculate hierarchical precision, recall and f-measure
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hierarchy = self.isco_hierarchy
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hP, hR = self.calculate_hierarchical_precision_recall(
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references, predictions,
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hF = self.hierarchical_f_measure(hP, hR)
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print(
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f"Accuracy: {accuracy}, Hierarchical Precision: {hP}, Hierarchical Recall: {hR}, Hierarchical F-measure: {hF}"
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)
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return {
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"accuracy": accuracy,
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from typing import List, Set, Dict, Tuple
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import evaluate
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import datasets
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import re
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# TODO: Add BibTeX citation
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print("Weighted ISCO hierarchy dictionary created as isco_hierarchy")
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# print(self.isco_hierarchy)
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# Function to check if a string matches the 4-digit code pattern
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def _is_valid_code(self, code: str):
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# Regular expression pattern for a 4-digit code
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pattern = r"^\d{4}$"
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if re.match(pattern, code):
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return True
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else:
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return False
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def _validate_codes(self, codes: list, code_type):
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if not all(self._is_valid_code(code) for code in codes):
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raise ValueError(
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f"All {code_type} labels must start with a 4-digit ISCO-08 code string."
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)
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def _compute(self, predictions, references):
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"""
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Computes the accuracy scores, hierarchical precision, recall, and f-measure.
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Args:
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predictions (List[str]): A list of 4-digit ISCO-08 prediction label strings.
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references (List[str]): A list of 4-digit ISCO-08 reference label strings.
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Returns:
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dict: A dictionary containing the accuracy, hierarchical precision, hierarchical recall,
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and hierarchical f-measure scores.
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"""
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# Cast all prediction labels as strings
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predictions = [str(p) for p in predictions]
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references = [str(r) for r in references]
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# Check if the first prediction label is longer than 4 characters
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if len(predictions[0]) > 4:
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# Extract the first 4 characters from each prediction label
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predictions = [str(p.split()[0]) for p in predictions]
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# Check if all prediction labels are 4-digit strings
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self._validate_codes(predictions, "prediction")
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# Repeat for reference labels
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references = [str(r.split()[0]) for r in references]
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self._validate_codes(references, "reference")
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# Calculate accuracy
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accuracy = sum(i == j for i, j in zip(predictions, references)) / len(
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predictions
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# Calculate hierarchical precision, recall and f-measure
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hP, hR = self.calculate_hierarchical_precision_recall(
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references, predictions, self.isco_hierarchy
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hF = self.hierarchical_f_measure(hP, hR)
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return {
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"accuracy": accuracy,
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