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from __future__ import annotations |
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import io |
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from typing import TYPE_CHECKING, Any |
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from bokeh.io import export_png, export_svg, show |
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from bokeh.io.export import get_screenshot_as_png |
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from bokeh.layouts import gridplot |
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from bokeh.models.annotations.labels import Label |
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from bokeh.palettes import Category10 |
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from bokeh.plotting import figure |
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import numpy as np |
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from contourpy import FillType, LineType |
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from contourpy.enum_util import as_fill_type, as_line_type |
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from contourpy.util.bokeh_util import filled_to_bokeh, lines_to_bokeh |
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from contourpy.util.renderer import Renderer |
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if TYPE_CHECKING: |
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from bokeh.models import GridPlot |
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from bokeh.palettes import Palette |
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from numpy.typing import ArrayLike |
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from selenium.webdriver.remote.webdriver import WebDriver |
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from contourpy._contourpy import FillReturn, LineReturn |
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class BokehRenderer(Renderer): |
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"""Utility renderer using Bokeh to render a grid of plots over the same (x, y) range. |
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Args: |
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nrows (int, optional): Number of rows of plots, default ``1``. |
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ncols (int, optional): Number of columns of plots, default ``1``. |
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figsize (tuple(float, float), optional): Figure size in inches (assuming 100 dpi), default |
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``(9, 9)``. |
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show_frame (bool, optional): Whether to show frame and axes ticks, default ``True``. |
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want_svg (bool, optional): Whether output is required in SVG format or not, default |
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``False``. |
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Warning: |
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:class:`~contourpy.util.bokeh_renderer.BokehRenderer`, unlike |
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:class:`~contourpy.util.mpl_renderer.MplRenderer`, needs to be told in advance if output to |
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SVG format will be required later, otherwise it will assume PNG output. |
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""" |
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_figures: list[figure] |
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_layout: GridPlot |
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_palette: Palette |
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_want_svg: bool |
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def __init__( |
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self, |
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nrows: int = 1, |
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ncols: int = 1, |
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figsize: tuple[float, float] = (9, 9), |
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show_frame: bool = True, |
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want_svg: bool = False, |
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) -> None: |
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self._want_svg = want_svg |
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self._palette = Category10[10] |
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total_size = 100*np.asarray(figsize, dtype=int) |
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nfigures = nrows*ncols |
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self._figures = [] |
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backend = "svg" if self._want_svg else "canvas" |
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for _ in range(nfigures): |
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fig = figure(output_backend=backend) |
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fig.xgrid.visible = False |
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fig.ygrid.visible = False |
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self._figures.append(fig) |
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if not show_frame: |
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fig.outline_line_color = None |
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fig.axis.visible = False |
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self._layout = gridplot( |
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self._figures, ncols=ncols, toolbar_location=None, |
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width=total_size[0] // ncols, height=total_size[1] // nrows) |
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def _convert_color(self, color: str) -> str: |
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if isinstance(color, str) and color[0] == "C": |
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index = int(color[1:]) |
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color = self._palette[index] |
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return color |
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def _get_figure(self, ax: figure | int) -> figure: |
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if isinstance(ax, int): |
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ax = self._figures[ax] |
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return ax |
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def filled( |
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self, |
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filled: FillReturn, |
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fill_type: FillType | str, |
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ax: figure | int = 0, |
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color: str = "C0", |
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alpha: float = 0.7, |
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) -> None: |
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"""Plot filled contours on a single plot. |
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Args: |
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filled (sequence of arrays): Filled contour data as returned by |
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:func:`~contourpy.ContourGenerator.filled`. |
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fill_type (FillType or str): Type of ``filled`` data as returned by |
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:attr:`~contourpy.ContourGenerator.fill_type`, or a string equivalent. |
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ax (int or Bokeh Figure, optional): Which plot to use, default ``0``. |
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color (str, optional): Color to plot with. May be a string color or the letter ``"C"`` |
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followed by an integer in the range ``"C0"`` to ``"C9"`` to use a color from the |
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``Category10`` palette. Default ``"C0"``. |
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alpha (float, optional): Opacity to plot with, default ``0.7``. |
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""" |
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fill_type = as_fill_type(fill_type) |
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fig = self._get_figure(ax) |
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color = self._convert_color(color) |
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xs, ys = filled_to_bokeh(filled, fill_type) |
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if len(xs) > 0: |
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fig.multi_polygons(xs=[xs], ys=[ys], color=color, fill_alpha=alpha, line_width=0) |
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def grid( |
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self, |
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x: ArrayLike, |
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y: ArrayLike, |
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ax: figure | int = 0, |
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color: str = "black", |
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alpha: float = 0.1, |
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point_color: str | None = None, |
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quad_as_tri_alpha: float = 0, |
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) -> None: |
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"""Plot quad grid lines on a single plot. |
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Args: |
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x (array-like of shape (ny, nx) or (nx,)): The x-coordinates of the grid points. |
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y (array-like of shape (ny, nx) or (ny,)): The y-coordinates of the grid points. |
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ax (int or Bokeh Figure, optional): Which plot to use, default ``0``. |
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color (str, optional): Color to plot grid lines, default ``"black"``. |
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alpha (float, optional): Opacity to plot lines with, default ``0.1``. |
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point_color (str, optional): Color to plot grid points or ``None`` if grid points |
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should not be plotted, default ``None``. |
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quad_as_tri_alpha (float, optional): Opacity to plot ``quad_as_tri`` grid, default |
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``0``. |
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Colors may be a string color or the letter ``"C"`` followed by an integer in the range |
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``"C0"`` to ``"C9"`` to use a color from the ``Category10`` palette. |
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Warning: |
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``quad_as_tri_alpha > 0`` plots all quads as though they are unmasked. |
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""" |
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fig = self._get_figure(ax) |
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x, y = self._grid_as_2d(x, y) |
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xs = [row for row in x] + [row for row in x.T] |
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ys = [row for row in y] + [row for row in y.T] |
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kwargs = dict(line_color=color, alpha=alpha) |
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fig.multi_line(xs, ys, **kwargs) |
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if quad_as_tri_alpha > 0: |
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xmid = (0.25*(x[:-1, :-1] + x[1:, :-1] + x[:-1, 1:] + x[1:, 1:])).ravel() |
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ymid = (0.25*(y[:-1, :-1] + y[1:, :-1] + y[:-1, 1:] + y[1:, 1:])).ravel() |
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fig.multi_line( |
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[row for row in np.stack((x[:-1, :-1].ravel(), xmid, x[1:, 1:].ravel()), axis=1)], |
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[row for row in np.stack((y[:-1, :-1].ravel(), ymid, y[1:, 1:].ravel()), axis=1)], |
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**kwargs) |
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fig.multi_line( |
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[row for row in np.stack((x[:-1, 1:].ravel(), xmid, x[1:, :-1].ravel()), axis=1)], |
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[row for row in np.stack((y[:-1, 1:].ravel(), ymid, y[1:, :-1].ravel()), axis=1)], |
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**kwargs) |
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if point_color is not None: |
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fig.circle( |
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x=x.ravel(), y=y.ravel(), fill_color=color, line_color=None, alpha=alpha, size=8) |
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def lines( |
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self, |
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lines: LineReturn, |
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line_type: LineType | str, |
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ax: figure | int = 0, |
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color: str = "C0", |
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alpha: float = 1.0, |
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linewidth: float = 1, |
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) -> None: |
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"""Plot contour lines on a single plot. |
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Args: |
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lines (sequence of arrays): Contour line data as returned by |
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:func:`~contourpy.ContourGenerator.lines`. |
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line_type (LineType or str): Type of ``lines`` data as returned by |
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:attr:`~contourpy.ContourGenerator.line_type`, or a string equivalent. |
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ax (int or Bokeh Figure, optional): Which plot to use, default ``0``. |
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color (str, optional): Color to plot lines. May be a string color or the letter ``"C"`` |
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followed by an integer in the range ``"C0"`` to ``"C9"`` to use a color from the |
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``Category10`` palette. Default ``"C0"``. |
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alpha (float, optional): Opacity to plot lines with, default ``1.0``. |
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linewidth (float, optional): Width of lines, default ``1``. |
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Note: |
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Assumes all lines are open line strips not closed line loops. |
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""" |
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line_type = as_line_type(line_type) |
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fig = self._get_figure(ax) |
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color = self._convert_color(color) |
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xs, ys = lines_to_bokeh(lines, line_type) |
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if xs is not None: |
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fig.line(xs, ys, line_color=color, line_alpha=alpha, line_width=linewidth) |
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def mask( |
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self, |
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x: ArrayLike, |
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y: ArrayLike, |
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z: ArrayLike | np.ma.MaskedArray[Any, Any], |
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ax: figure | int = 0, |
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color: str = "black", |
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) -> None: |
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"""Plot masked out grid points as circles on a single plot. |
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Args: |
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x (array-like of shape (ny, nx) or (nx,)): The x-coordinates of the grid points. |
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y (array-like of shape (ny, nx) or (ny,)): The y-coordinates of the grid points. |
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z (masked array of shape (ny, nx): z-values. |
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ax (int or Bokeh Figure, optional): Which plot to use, default ``0``. |
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color (str, optional): Circle color, default ``"black"``. |
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""" |
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mask = np.ma.getmask(z) |
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if mask is np.ma.nomask: |
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return |
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fig = self._get_figure(ax) |
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color = self._convert_color(color) |
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x, y = self._grid_as_2d(x, y) |
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fig.circle(x[mask], y[mask], fill_color=color, size=10) |
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def save( |
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self, |
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filename: str, |
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transparent: bool = False, |
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*, |
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webdriver: WebDriver | None = None, |
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) -> None: |
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"""Save plots to SVG or PNG file. |
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Args: |
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filename (str): Filename to save to. |
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transparent (bool, optional): Whether background should be transparent, default |
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``False``. |
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webdriver (WebDriver, optional): Selenium WebDriver instance to use to create the image. |
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.. versionadded:: 1.1.1 |
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Warning: |
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To output to SVG file, ``want_svg=True`` must have been passed to the constructor. |
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""" |
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if transparent: |
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for fig in self._figures: |
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fig.background_fill_color = None |
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fig.border_fill_color = None |
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if self._want_svg: |
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export_svg(self._layout, filename=filename, webdriver=webdriver) |
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else: |
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export_png(self._layout, filename=filename, webdriver=webdriver) |
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def save_to_buffer(self, *, webdriver: WebDriver | None = None) -> io.BytesIO: |
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"""Save plots to an ``io.BytesIO`` buffer. |
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Args: |
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webdriver (WebDriver, optional): Selenium WebDriver instance to use to create the image. |
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.. versionadded:: 1.1.1 |
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Return: |
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BytesIO: PNG image buffer. |
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""" |
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image = get_screenshot_as_png(self._layout, driver=webdriver) |
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buffer = io.BytesIO() |
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image.save(buffer, "png") |
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return buffer |
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def show(self) -> None: |
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"""Show plots in web browser, in usual Bokeh manner. |
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""" |
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show(self._layout) |
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def title(self, title: str, ax: figure | int = 0, color: str | None = None) -> None: |
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"""Set the title of a single plot. |
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Args: |
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title (str): Title text. |
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ax (int or Bokeh Figure, optional): Which plot to set the title of, default ``0``. |
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color (str, optional): Color to set title. May be a string color or the letter ``"C"`` |
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followed by an integer in the range ``"C0"`` to ``"C9"`` to use a color from the |
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``Category10`` palette. Default ``None`` which is ``black``. |
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""" |
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fig = self._get_figure(ax) |
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fig.title = title |
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fig.title.align = "center" |
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if color is not None: |
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fig.title.text_color = self._convert_color(color) |
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def z_values( |
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self, |
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x: ArrayLike, |
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y: ArrayLike, |
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z: ArrayLike, |
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ax: figure | int = 0, |
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color: str = "green", |
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fmt: str = ".1f", |
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quad_as_tri: bool = False, |
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) -> None: |
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"""Show ``z`` values on a single plot. |
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Args: |
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x (array-like of shape (ny, nx) or (nx,)): The x-coordinates of the grid points. |
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y (array-like of shape (ny, nx) or (ny,)): The y-coordinates of the grid points. |
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z (array-like of shape (ny, nx): z-values. |
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ax (int or Bokeh Figure, optional): Which plot to use, default ``0``. |
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color (str, optional): Color of added text. May be a string color or the letter ``"C"`` |
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followed by an integer in the range ``"C0"`` to ``"C9"`` to use a color from the |
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``Category10`` palette. Default ``"green"``. |
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fmt (str, optional): Format to display z-values, default ``".1f"``. |
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quad_as_tri (bool, optional): Whether to show z-values at the ``quad_as_tri`` centres |
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of quads. |
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Warning: |
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``quad_as_tri=True`` shows z-values for all quads, even if masked. |
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""" |
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fig = self._get_figure(ax) |
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color = self._convert_color(color) |
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x, y = self._grid_as_2d(x, y) |
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z = np.asarray(z) |
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ny, nx = z.shape |
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kwargs = dict(text_color=color, text_align="center", text_baseline="middle") |
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for j in range(ny): |
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for i in range(nx): |
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fig.add_layout(Label(x=x[j, i], y=y[j, i], text=f"{z[j, i]:{fmt}}", **kwargs)) |
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if quad_as_tri: |
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for j in range(ny-1): |
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for i in range(nx-1): |
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xx = np.mean(x[j:j+2, i:i+2]) |
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yy = np.mean(y[j:j+2, i:i+2]) |
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zz = np.mean(z[j:j+2, i:i+2]) |
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fig.add_layout(Label(x=xx, y=yy, text=f"{zz:{fmt}}", **kwargs)) |
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