| { "name": "biomarker_log", | |
| "d_model_name" : "DeepChem/ChemBERTa-10M-MTR", | |
| "p_model_name" : "DeepChem/ChemBERTa-77M-MLM", | |
| "gpu_ids" : "0", | |
| "model_mode" : "train", | |
| "load_checkpoint" : "./checkpoint/bindingDB/test.ckpt", | |
| "prot_maxlength" : 360, | |
| "layer_limit" : true, | |
| "max_epoch": 16, | |
| "batch_size": 40, | |
| "num_workers": 0, | |
| "task_name" : "OSC", | |
| "lr": 1e-4, | |
| "layer_features" : [512, 128, 64, 1], | |
| "dropout" : 0.1, | |
| "loss_fn" : "MSE", | |
| "traindata_rate" : 1.0, | |
| "pretrained": {"chem":true, "prot":true}, | |
| "num_seed" : 111 | |
| } | |