plot smooth data

.ipynb_checkpoints/app-checkpoint.py

@@ -3,6 +3,7 @@ import pandas as pd
 import numpy as np
 import time
 import plotly.graph_objects as go
+from scipy.ndimage import gaussian_filter1d
 
 np.random.seed(2024)
 
@@ -27,16 +28,17 @@ def plot_interactive_scatter(uid: str):
 
 def plot_interactive_line(uid_data: pd.DataFrame, uid: str):
     
-    hover_text = list(uid_data.apply(lambda row: f"{row['site']}: {np.round(row['aPLLR'], 3)}", axis=1))
+    plot_data = gaussian_filter1d(-np.log10(uid_data.aPLLR))
+    hover_text = [f"{x}: {y}" for x, y in zip(uid_data.site, plot_data)]
     
     line_trace = go.Scatter(
         x=np.arange(len(uid_data)),
-        y=uid_data.aPLLR,
+        y=plot_data,
         mode='lines+markers',
         name='aPLLR Values',
         text=hover_text,
         hoverinfo='text',
-        marker=dict(color='black')
+        marker=dict(color='orange')
     )
     line_fig = go.Figure(data=[line_trace])
     line_fig.update_layout(

.ipynb_checkpoints/requirements-checkpoint.txt

@@ -0,0 +1,6 @@
+fastapi
+uvicorn[standard]
+pandas
+plotly
+numpy
+scipy

app.py

@@ -3,6 +3,7 @@ import pandas as pd
 import numpy as np
 import time
 import plotly.graph_objects as go
+from scipy.ndimage import gaussian_filter1d
 
 np.random.seed(2024)
 
@@ -27,16 +28,17 @@ def plot_interactive_scatter(uid: str):
 
 def plot_interactive_line(uid_data: pd.DataFrame, uid: str):
     
-    hover_text = list(uid_data.apply(lambda row: f"{row['site']}: {np.round(row['aPLLR'], 3)}", axis=1))
+    plot_data = gaussian_filter1d(-np.log10(uid_data.aPLLR))
+    hover_text = [f"{x}: {y}" for x, y in zip(uid_data.site, plot_data)]
     
     line_trace = go.Scatter(
         x=np.arange(len(uid_data)),
-        y=uid_data.aPLLR,
+        y=plot_data,
         mode='lines+markers',
         name='aPLLR Values',
         text=hover_text,
         hoverinfo='text',
-        marker=dict(color='black')
+        marker=dict(color='orange')
     )
     line_fig = go.Figure(data=[line_trace])
     line_fig.update_layout(

requirements.txt

@@ -2,4 +2,5 @@ fastapi
 uvicorn[standard]
 pandas
 plotly
-numpy
+numpy
+scipy