BerfScene / models /utils /batchnorm.py
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# -*- coding: utf-8 -*-
# File : batchnorm.py
# Author : Jiayuan Mao
# Email : maojiayuan@gmail.com
# Date : 27/01/2018
#
# This file is part of Synchronized-BatchNorm-PyTorch.
# https://github.com/vacancy/Synchronized-BatchNorm-PyTorch
# Distributed under MIT License.
import collections
import contextlib
import torch
import torch.nn.functional as F
from torch.nn.modules.batchnorm import _BatchNorm
try:
from torch.nn.parallel._functions import ReduceAddCoalesced, Broadcast
except ImportError:
ReduceAddCoalesced = Broadcast = None
try:
from jactorch.parallel.comm import SyncMaster
from jactorch.parallel.data_parallel import JacDataParallel as DataParallelWithCallback
except ImportError:
from .comm import SyncMaster
from .replicate import DataParallelWithCallback
__all__ = [
'set_sbn_eps_mode',
'SynchronizedBatchNorm1d', 'SynchronizedBatchNorm2d', 'SynchronizedBatchNorm3d',
'patch_sync_batchnorm', 'convert_model'
]
SBN_EPS_MODE = 'clamp'
def set_sbn_eps_mode(mode):
global SBN_EPS_MODE
assert mode in ('clamp', 'plus')
SBN_EPS_MODE = mode
def _sum_ft(tensor):
"""sum over the first and last dimention"""
return tensor.sum(dim=0).sum(dim=-1)
def _unsqueeze_ft(tensor):
"""add new dimensions at the front and the tail"""
return tensor.unsqueeze(0).unsqueeze(-1)
_ChildMessage = collections.namedtuple('_ChildMessage', ['sum', 'ssum', 'sum_size'])
_MasterMessage = collections.namedtuple('_MasterMessage', ['sum', 'inv_std'])
class _SynchronizedBatchNorm(_BatchNorm):
def __init__(self, num_features, eps=1e-5, momentum=0.1, affine=True, track_running_stats=True):
assert ReduceAddCoalesced is not None, 'Can not use Synchronized Batch Normalization without CUDA support.'
super(_SynchronizedBatchNorm, self).__init__(num_features, eps=eps, momentum=momentum, affine=affine,
track_running_stats=track_running_stats)
if not self.track_running_stats:
import warnings
warnings.warn('track_running_stats=False is not supported by the SynchronizedBatchNorm.')
self._sync_master = SyncMaster(self._data_parallel_master)
self._is_parallel = False
self._parallel_id = None
self._slave_pipe = None
def forward(self, input):
# If it is not parallel computation or is in evaluation mode, use PyTorch's implementation.
if not (self._is_parallel and self.training):
return F.batch_norm(
input, self.running_mean, self.running_var, self.weight, self.bias,
self.training, self.momentum, self.eps)
# Resize the input to (B, C, -1).
input_shape = input.size()
assert input.size(1) == self.num_features, 'Channel size mismatch: got {}, expect {}.'.format(input.size(1), self.num_features)
input = input.view(input.size(0), self.num_features, -1)
# Compute the sum and square-sum.
sum_size = input.size(0) * input.size(2)
input_sum = _sum_ft(input)
input_ssum = _sum_ft(input ** 2)
# Reduce-and-broadcast the statistics.
if self._parallel_id == 0:
mean, inv_std = self._sync_master.run_master(_ChildMessage(input_sum, input_ssum, sum_size))
else:
mean, inv_std = self._slave_pipe.run_slave(_ChildMessage(input_sum, input_ssum, sum_size))
# Compute the output.
if self.affine:
# MJY:: Fuse the multiplication for speed.
output = (input - _unsqueeze_ft(mean)) * _unsqueeze_ft(inv_std * self.weight) + _unsqueeze_ft(self.bias)
else:
output = (input - _unsqueeze_ft(mean)) * _unsqueeze_ft(inv_std)
# Reshape it.
return output.view(input_shape)
def __data_parallel_replicate__(self, ctx, copy_id):
self._is_parallel = True
self._parallel_id = copy_id
# parallel_id == 0 means master device.
if self._parallel_id == 0:
ctx.sync_master = self._sync_master
else:
self._slave_pipe = ctx.sync_master.register_slave(copy_id)
def _data_parallel_master(self, intermediates):
"""Reduce the sum and square-sum, compute the statistics, and broadcast it."""
# Always using same "device order" makes the ReduceAdd operation faster.
# Thanks to:: Tete Xiao (http://tetexiao.com/)
intermediates = sorted(intermediates, key=lambda i: i[1].sum.get_device())
to_reduce = [i[1][:2] for i in intermediates]
to_reduce = [j for i in to_reduce for j in i] # flatten
target_gpus = [i[1].sum.get_device() for i in intermediates]
sum_size = sum([i[1].sum_size for i in intermediates])
sum_, ssum = ReduceAddCoalesced.apply(target_gpus[0], 2, *to_reduce)
mean, inv_std = self._compute_mean_std(sum_, ssum, sum_size)
broadcasted = Broadcast.apply(target_gpus, mean, inv_std)
outputs = []
for i, rec in enumerate(intermediates):
outputs.append((rec[0], _MasterMessage(*broadcasted[i*2:i*2+2])))
return outputs
def _compute_mean_std(self, sum_, ssum, size):
"""Compute the mean and standard-deviation with sum and square-sum. This method
also maintains the moving average on the master device."""
assert size > 1, 'BatchNorm computes unbiased standard-deviation, which requires size > 1.'
mean = sum_ / size
sumvar = ssum - sum_ * mean
unbias_var = sumvar / (size - 1)
bias_var = sumvar / size
if hasattr(torch, 'no_grad'):
with torch.no_grad():
self.running_mean = (1 - self.momentum) * self.running_mean + self.momentum * mean.data
self.running_var = (1 - self.momentum) * self.running_var + self.momentum * unbias_var.data
else:
self.running_mean = (1 - self.momentum) * self.running_mean + self.momentum * mean.data
self.running_var = (1 - self.momentum) * self.running_var + self.momentum * unbias_var.data
if SBN_EPS_MODE == 'clamp':
return mean, bias_var.clamp(self.eps) ** -0.5
elif SBN_EPS_MODE == 'plus':
return mean, (bias_var + self.eps) ** -0.5
else:
raise ValueError('Unknown EPS mode: {}.'.format(SBN_EPS_MODE))
class SynchronizedBatchNorm1d(_SynchronizedBatchNorm):
r"""Applies Synchronized Batch Normalization over a 2d or 3d input that is seen as a
mini-batch.
.. math::
y = \frac{x - mean[x]}{ \sqrt{Var[x] + \epsilon}} * gamma + beta
This module differs from the built-in PyTorch BatchNorm1d as the mean and
standard-deviation are reduced across all devices during training.
For example, when one uses `nn.DataParallel` to wrap the network during
training, PyTorch's implementation normalize the tensor on each device using
the statistics only on that device, which accelerated the computation and
is also easy to implement, but the statistics might be inaccurate.
Instead, in this synchronized version, the statistics will be computed
over all training samples distributed on multiple devices.
Note that, for one-GPU or CPU-only case, this module behaves exactly same
as the built-in PyTorch implementation.
The mean and standard-deviation are calculated per-dimension over
the mini-batches and gamma and beta are learnable parameter vectors
of size C (where C is the input size).
During training, this layer keeps a running estimate of its computed mean
and variance. The running sum is kept with a default momentum of 0.1.
During evaluation, this running mean/variance is used for normalization.
Because the BatchNorm is done over the `C` dimension, computing statistics
on `(N, L)` slices, it's common terminology to call this Temporal BatchNorm
Args:
num_features: num_features from an expected input of size
`batch_size x num_features [x width]`
eps: a value added to the denominator for numerical stability.
Default: 1e-5
momentum: the value used for the running_mean and running_var
computation. Default: 0.1
affine: a boolean value that when set to ``True``, gives the layer learnable
affine parameters. Default: ``True``
Shape::
- Input: :math:`(N, C)` or :math:`(N, C, L)`
- Output: :math:`(N, C)` or :math:`(N, C, L)` (same shape as input)
Examples:
>>> # With Learnable Parameters
>>> m = SynchronizedBatchNorm1d(100)
>>> # Without Learnable Parameters
>>> m = SynchronizedBatchNorm1d(100, affine=False)
>>> input = torch.autograd.Variable(torch.randn(20, 100))
>>> output = m(input)
"""
def _check_input_dim(self, input):
if input.dim() != 2 and input.dim() != 3:
raise ValueError('expected 2D or 3D input (got {}D input)'
.format(input.dim()))
class SynchronizedBatchNorm2d(_SynchronizedBatchNorm):
r"""Applies Batch Normalization over a 4d input that is seen as a mini-batch
of 3d inputs
.. math::
y = \frac{x - mean[x]}{ \sqrt{Var[x] + \epsilon}} * gamma + beta
This module differs from the built-in PyTorch BatchNorm2d as the mean and
standard-deviation are reduced across all devices during training.
For example, when one uses `nn.DataParallel` to wrap the network during
training, PyTorch's implementation normalize the tensor on each device using
the statistics only on that device, which accelerated the computation and
is also easy to implement, but the statistics might be inaccurate.
Instead, in this synchronized version, the statistics will be computed
over all training samples distributed on multiple devices.
Note that, for one-GPU or CPU-only case, this module behaves exactly same
as the built-in PyTorch implementation.
The mean and standard-deviation are calculated per-dimension over
the mini-batches and gamma and beta are learnable parameter vectors
of size C (where C is the input size).
During training, this layer keeps a running estimate of its computed mean
and variance. The running sum is kept with a default momentum of 0.1.
During evaluation, this running mean/variance is used for normalization.
Because the BatchNorm is done over the `C` dimension, computing statistics
on `(N, H, W)` slices, it's common terminology to call this Spatial BatchNorm
Args:
num_features: num_features from an expected input of
size batch_size x num_features x height x width
eps: a value added to the denominator for numerical stability.
Default: 1e-5
momentum: the value used for the running_mean and running_var
computation. Default: 0.1
affine: a boolean value that when set to ``True``, gives the layer learnable
affine parameters. Default: ``True``
Shape::
- Input: :math:`(N, C, H, W)`
- Output: :math:`(N, C, H, W)` (same shape as input)
Examples:
>>> # With Learnable Parameters
>>> m = SynchronizedBatchNorm2d(100)
>>> # Without Learnable Parameters
>>> m = SynchronizedBatchNorm2d(100, affine=False)
>>> input = torch.autograd.Variable(torch.randn(20, 100, 35, 45))
>>> output = m(input)
"""
def _check_input_dim(self, input):
if input.dim() != 4:
raise ValueError('expected 4D input (got {}D input)'
.format(input.dim()))
class SynchronizedBatchNorm3d(_SynchronizedBatchNorm):
r"""Applies Batch Normalization over a 5d input that is seen as a mini-batch
of 4d inputs
.. math::
y = \frac{x - mean[x]}{ \sqrt{Var[x] + \epsilon}} * gamma + beta
This module differs from the built-in PyTorch BatchNorm3d as the mean and
standard-deviation are reduced across all devices during training.
For example, when one uses `nn.DataParallel` to wrap the network during
training, PyTorch's implementation normalize the tensor on each device using
the statistics only on that device, which accelerated the computation and
is also easy to implement, but the statistics might be inaccurate.
Instead, in this synchronized version, the statistics will be computed
over all training samples distributed on multiple devices.
Note that, for one-GPU or CPU-only case, this module behaves exactly same
as the built-in PyTorch implementation.
The mean and standard-deviation are calculated per-dimension over
the mini-batches and gamma and beta are learnable parameter vectors
of size C (where C is the input size).
During training, this layer keeps a running estimate of its computed mean
and variance. The running sum is kept with a default momentum of 0.1.
During evaluation, this running mean/variance is used for normalization.
Because the BatchNorm is done over the `C` dimension, computing statistics
on `(N, D, H, W)` slices, it's common terminology to call this Volumetric BatchNorm
or Spatio-temporal BatchNorm
Args:
num_features: num_features from an expected input of
size batch_size x num_features x depth x height x width
eps: a value added to the denominator for numerical stability.
Default: 1e-5
momentum: the value used for the running_mean and running_var
computation. Default: 0.1
affine: a boolean value that when set to ``True``, gives the layer learnable
affine parameters. Default: ``True``
Shape::
- Input: :math:`(N, C, D, H, W)`
- Output: :math:`(N, C, D, H, W)` (same shape as input)
Examples:
>>> # With Learnable Parameters
>>> m = SynchronizedBatchNorm3d(100)
>>> # Without Learnable Parameters
>>> m = SynchronizedBatchNorm3d(100, affine=False)
>>> input = torch.autograd.Variable(torch.randn(20, 100, 35, 45, 10))
>>> output = m(input)
"""
def _check_input_dim(self, input):
if input.dim() != 5:
raise ValueError('expected 5D input (got {}D input)'
.format(input.dim()))
@contextlib.contextmanager
def patch_sync_batchnorm():
import torch.nn as nn
backup = nn.BatchNorm1d, nn.BatchNorm2d, nn.BatchNorm3d
nn.BatchNorm1d = SynchronizedBatchNorm1d
nn.BatchNorm2d = SynchronizedBatchNorm2d
nn.BatchNorm3d = SynchronizedBatchNorm3d
yield
nn.BatchNorm1d, nn.BatchNorm2d, nn.BatchNorm3d = backup
def convert_model(module):
"""Traverse the input module and its child recursively
and replace all instance of torch.nn.modules.batchnorm.BatchNorm*N*d
to SynchronizedBatchNorm*N*d
Args:
module: the input module needs to be convert to SyncBN model
Examples:
>>> import torch.nn as nn
>>> import torchvision
>>> # m is a standard pytorch model
>>> m = torchvision.models.resnet18(True)
>>> m = nn.DataParallel(m)
>>> # after convert, m is using SyncBN
>>> m = convert_model(m)
"""
if isinstance(module, torch.nn.DataParallel):
mod = module.module
mod = convert_model(mod)
mod = DataParallelWithCallback(mod, device_ids=module.device_ids)
return mod
mod = module
for pth_module, sync_module in zip([torch.nn.modules.batchnorm.BatchNorm1d,
torch.nn.modules.batchnorm.BatchNorm2d,
torch.nn.modules.batchnorm.BatchNorm3d],
[SynchronizedBatchNorm1d,
SynchronizedBatchNorm2d,
SynchronizedBatchNorm3d]):
if isinstance(module, pth_module):
mod = sync_module(module.num_features, module.eps, module.momentum, module.affine)
mod.running_mean = module.running_mean
mod.running_var = module.running_var
if module.affine:
mod.weight.data = module.weight.data.clone().detach()
mod.bias.data = module.bias.data.clone().detach()
for name, child in module.named_children():
mod.add_module(name, convert_model(child))
return mod