Update app.py
Browse files
app.py
CHANGED
@@ -1,6 +1,7 @@
|
|
1 |
import gradio as gr
|
2 |
import sys
|
3 |
import random
|
|
|
4 |
sys.path.append("scripts/")
|
5 |
from foldseek_util import get_struc_seq
|
6 |
|
@@ -9,6 +10,7 @@ def predict_stability(model_choice, organism_choice, pdb_file=None, sequence=Non
|
|
9 |
# Check if pdb_file is provided
|
10 |
if pdb_file:
|
11 |
pdb_path = pdb_file.name # Get the path of the uploaded PDB file
|
|
|
12 |
sequence = get_foldseek_seq(pdb_path)
|
13 |
if not sequence:
|
14 |
return "Failed to extract sequence from the PDB file."
|
|
|
1 |
import gradio as gr
|
2 |
import sys
|
3 |
import random
|
4 |
+
import os
|
5 |
sys.path.append("scripts/")
|
6 |
from foldseek_util import get_struc_seq
|
7 |
|
|
|
10 |
# Check if pdb_file is provided
|
11 |
if pdb_file:
|
12 |
pdb_path = pdb_file.name # Get the path of the uploaded PDB file
|
13 |
+
os.system("chmod 777 bin/foldseek")
|
14 |
sequence = get_foldseek_seq(pdb_path)
|
15 |
if not sequence:
|
16 |
return "Failed to extract sequence from the PDB file."
|